Array 1 1002141-993770 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN885086.1 Candidatus Nitrospira inopinata isolate ENR4 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 1002140 36 100.0 33 .................................... GGCCTCCTCAATTCGCCGCCGGAGGGTGCGCCA 1002071 36 100.0 36 .................................... CTGATGGTGGAATATTCTTCGGCGGTGCGGGAATAC 1001999 36 100.0 32 .................................... TCTCGCCAGGTGGCGGGGTAGGCCGTGACGCC 1001931 36 100.0 36 .................................... CTCCATGGGGGAATGCAATTCGCATTCCCCATTACA 1001859 36 100.0 34 .................................... CTCGGTGTACGGCTCATACTCGCCGTACCCGACA 1001789 36 100.0 34 .................................... TCCAGAGCGAAATTCGTTCCATATGTGAAAATAA 1001719 36 100.0 35 .................................... CTAGATCCGCCCGGTACCACTTCCAGAATTTTTGC 1001648 36 100.0 35 .................................... GCATTCCCCATTACAACACCGGGCGGCCTCTAGAT 1001577 36 100.0 34 .................................... AGATTTCCATCATGATGTTCCCTCCTTTGCCCCC 1001507 36 100.0 34 .................................... AAAAAGGCCGACCAGACGCTACCGAGTAGCGTCT 1001437 36 100.0 33 .................................... CCAGTGCCTGCTTCGCCTCCTCAAAGGTAGAGG 1001368 36 100.0 36 .................................... CCGCGAGCAGACAGGCGCCCACCATGTGCATATTGG 1001296 36 100.0 40 .................................... ACCGTAGTGCTGACCGTCACCACGATCCCAGATGCTGTAG 1001220 36 100.0 34 .................................... CGTATATCTCCATCCGTTGCTGCATGATTACACC 1001150 36 100.0 37 .................................... GGCGCGGATCCGAGATCGATGTGTGATACCCTTCCGG 1001077 36 100.0 32 .................................... ACCATATGCGTCCGGATACGCATCGAACCCGA 1001009 36 100.0 35 .................................... CCTCTGGATCGTCCGTCCAGATCATGACCAGATCA 1000938 36 100.0 40 .................................... CTAACGTGGGCCCAGCGCTCAATTCGCGATACTCCCCACG 1000862 36 100.0 34 .................................... CTCCGCCGATATGTACAACCCGCGGTGGCGCTGA 1000792 36 100.0 37 .................................... CCATGTCTGCGCTTCACAATAAAGCCTGCGACTTCAG 1000719 36 100.0 34 .................................... TTGTTCCGTGAGCCCTATTGCTCACGTCTACTCT 1000649 36 100.0 39 .................................... GGAATGAATTCGACTGCCCCGTGACGGTGACGGGGCAAT 1000574 36 100.0 35 .................................... GCCATCGTGCCGCACTAGGCCTGTCACGACGGTGG 1000503 36 100.0 37 .................................... GGCAGTGGCCGGGTGATAGGCCACCAGCTCCAGGATG 1000430 36 100.0 36 .................................... AGAGCGAAGGACCCCGAGACCGGGGTCCCACTCCCA 1000358 36 100.0 36 .................................... GCCCGCCGCGCCAGCTCCCTCCGGCACGGGGGCCGG 1000286 36 100.0 35 .................................... TCGGCCTCTAGCCACCAGCGGCTGCCGGTTCCGTC 1000215 36 100.0 36 .................................... GGGCCTGGCGAGCCCAGATGCCCGCCAGGTTGCCCG 1000143 36 100.0 37 .................................... CTCGGTGAGGAGGACAGTTTCCACACCGAGGGTTAGG 1000070 36 100.0 34 .................................... AAAACGTAATCCTCACCCTCTACTGTCAGTAGGA 1000000 36 100.0 39 .................................... CTAGGGAGTCCCATTATTTCATCCGGCAAGGTGCCGGGT 999925 36 100.0 36 .................................... CCCCGTTGGGCGTGTTACCCGACGGGGCCTAGACGC 999853 36 100.0 32 .................................... CTCCCAGAGGGGAGTGAATCCAGCCGCCCTGA 999785 36 100.0 35 .................................... GAAACTTCGGATTCCTCACCATGATGCTTCGTGTT 999714 36 100.0 35 .................................... GTCGCGCGTAACGCGACCAGCTCGTAGAGATGCCG 999643 36 100.0 35 .................................... CCGCTAGGATTTGTTCAATCCTAGCGGTTTTCCCG 999572 36 100.0 33 .................................... AAGGTCCTGGACTCTCAATTGATAAATGAGAGT 999503 36 100.0 35 .................................... CGCTTCCCCAATTCATCCTCACGCCGACTTCCCCT 999432 36 100.0 37 .................................... TTCCCGCCCGGTCCTCGCTGATACGATCGATACGCCA 999359 36 100.0 39 .................................... CTGAGCGCCAAAAGACGCATCCGTGAGGCGCGCCAACGC 999284 36 100.0 38 .................................... ATCCTGAGCGACAGATCGATATTGTAGAGACTCCCCCA 999210 36 100.0 37 .................................... CGGTAGTCGGAAACCAACTTTTCCCATTTCCTTCTCT 999137 36 100.0 35 .................................... AAAATGTAATCCTCACCTTCCACGGTGAGGAGGAG 999066 36 100.0 35 .................................... GAATTCCACGGCACCATGTCGATGCCGTGGAAGGC 998995 36 100.0 34 .................................... GCTGGGGCATGGGACATCTCGTCTAAGAAGATTA 998925 36 100.0 34 .................................... CCGCATTCTCGATGCAGGCCACCGCCGAATATAA 998855 36 100.0 34 .................................... GAAATTCGCCGTCTCGAAGCGATGTACCCCGTCG 998785 36 100.0 36 .................................... CGTCGTGCCGCACCAAGCCGGTCACGACGACGGCAG 998713 36 100.0 34 .................................... CAACTCTGCGACCGTCATATGTGTCATGATTATC 998643 36 100.0 34 .................................... AACAAATCTCCCTTATCTGCTAACTTAGTTTTCT 998573 36 100.0 33 .................................... ATCTAAGAAGATTACTCCAGGTTGACTTGTCAT 998504 36 100.0 33 .................................... TGCATGGCGGCAACGATTATCGTTGCCGGATGT 998435 36 100.0 37 .................................... GCCTAGGCAAGCCCATTATTTCATCCGGCAAGGTGCC 998362 36 100.0 37 .................................... GGCGCCTTCCGCGCAACCGTGCAAGTGCTTTCTCTAA 998289 36 100.0 37 .................................... AGCCGAGGCCGAGAAACAACCCGATCAACAGGTCTGG 998216 36 100.0 36 .................................... CCCAATTCATTCGCACTCCGACGGCACCTTCGGGGA 998144 36 100.0 35 .................................... CCCAAGCCTGTAGATACTCCACAAAATTCCCAAAC 998073 36 100.0 35 .................................... CTCCAACCCCTCAATTGTCGTTATCACCATGACTT 998002 36 100.0 33 .................................... TCTATTTACTCGGCAAGGCCGACGTATTCTCTC 997933 36 100.0 38 .................................... CAGTAGGGGATATCCCTACTGGGCTTGGGGGTTGGGAT 997859 36 100.0 35 .................................... AGCCGGATGGAGCACAAGGTCCTGGACTCGTAATT 997788 36 100.0 35 .................................... AATCGCTAACAAATCTATTCCGCATGCTGAAGCCG 997717 36 100.0 38 .................................... GACGCTCGCGCATGCGAGCCCCCAGGGCAGAATGCTCG 997643 36 100.0 35 .................................... CGAAGCCCCCGGGTTGTGTCTCTCTCTTACTCTGG 997572 36 100.0 35 .................................... CCATCGAAGTATCGCGCTTCTCGATAAAGGCAGGC 997501 36 100.0 35 .................................... GGAAGTGCCTTTCGCAGCACTCCCCCAGTTCATAC 997430 36 100.0 33 .................................... CTAGTGAGTCGAACGTAATGAGATTTTCGACAT 997361 36 100.0 34 .................................... AAATGCGCCATGGTCACTCCTTTTTACGCTGAGG 997291 36 100.0 34 .................................... AAACACGAAGTCCTCACCTTCCACGGTGAGGAGG 997221 36 100.0 32 .................................... CGTAACGACTCATATCTCCCCCCCTTGTGTCG 997153 36 100.0 36 .................................... CATGGATCCGGTGTGGGTCCTGGACATCCGGGACCA 997081 36 100.0 36 .................................... CTCAGGTCGATGTTCCTGAGCCCGCGTGCTTCTGTC 997009 36 100.0 36 .................................... CTCCACGCCGAGCCCCTTTTCCCGCATGAGGAAAAG 996937 36 100.0 38 .................................... ATTTGCCAGTTTAATATTTTCCGAAAAACAGATTCTGA 996863 36 100.0 35 .................................... GGATGGCCCGCCAGTCACAGCGACCAGCACAGCGG 996792 36 100.0 37 .................................... CGACCAGTGCGAGCTTGACTCCCATCGGGAGCTCCCG 996719 36 100.0 32 .................................... GCTCCATCGATTCTGGCCCAGTAGTGCCTGAT 996651 36 100.0 34 .................................... AATCTTGGCCAGCGAGGTTATCGCCAGCATGAAT 996581 36 100.0 40 .................................... GCATTGATCCACGGAAGCAGACCTCTTGGAGGTCTGCTCC 996505 36 100.0 36 .................................... CCTTGTCTGGGGGCCTCAGCCCCCGGGTTGACAATT 996433 36 100.0 34 .................................... GGTTCGTGGAGTCGCCGTTGTGGTCGGCAACTCC 996363 36 100.0 34 .................................... CACGGCACCATGACGATGCCGGGGGAGTCCCATT 996293 36 100.0 37 .................................... CTCCTCCTTTGTGAATCACTTGTCCGATCCCTAACTG 996220 36 100.0 36 .................................... GGTGGGAGATCGAAGACCACCTCATCATGAATTTCG 996148 36 100.0 37 .................................... GCAATGGCGAGAATGTCGATTCCGCATGCCGACGTTG 996075 36 100.0 34 .................................... AATCGACCAGGAACAGACCCACTACAAAGAGCCT 996005 36 100.0 34 .................................... GCGTAATCAAGCACGTCTAGCGTATGGTGGCTAA 995935 36 100.0 37 .................................... ACGGAGCGCGATGAGTAACTCGTCACGCTCGCCCTCG 995862 36 100.0 34 .................................... GACTTGCCCCACCGAAGAGGCCCGCAAGAATTCT 995792 36 100.0 35 .................................... CGACCAGTGCGAGCTTGACTCCCATCGGAAGCTCC 995721 36 100.0 33 .................................... GGCGGGCTCGATTTTGATTTCGTACCTCATCGT 995652 36 100.0 35 .................................... CGATGAGCGCCGAAACGGCCTCCTGTGATAGCTCT 995581 36 100.0 34 .................................... TCGCTAGGAATGTCCATCCCTATAATCTCACAAT 995511 36 100.0 33 .................................... AGCGCAGCGGTCGCTGTGCTGGACGAGCCAGTG 995442 36 100.0 37 .................................... GGTCACGACGATGGCAGGGTCCTCCTCGAGGACCCAT 995369 36 100.0 35 .................................... CCCACGCCAGGGTGATGATCCGCCCCCTGATTCAG 995298 36 100.0 32 .................................... CCTCTCGGAAATCACACTCCGAGAGGTCGGCG 995230 36 100.0 35 .................................... CGATGAGCGCCGAAACGGCCTCCTGTGATAGCTCT 995159 36 100.0 38 .................................... AGTCGCAGCGACCGGCACAATGATCGCTATGCTGGGAT 995085 36 100.0 35 .................................... GGCTGAACAGGTAGACTACTCACGTCAATTTGACG 995014 36 100.0 33 .................................... AATTCTACGGCACCATGCCGATGCCGTGGAAGT 994945 36 100.0 37 .................................... TGAGGCGTGTGAGAGCAGGCTCTCCTGCAGGTTGCAG 994872 36 100.0 35 .................................... CAAAATAGCCAGGTACATCATGCCTCCTCTAAGAG 994801 36 100.0 39 .................................... AGTCCGGCCCTCATGCCCGGCCCATGGAGCCGGCGTGGG 994726 36 100.0 34 .................................... GATTGGGCGGATGAATATTCCATCTACCCCTCTT 994656 36 100.0 36 .................................... TCATACCCCAGGTCCTGAATCCGGAGGCTCAGGTCG 994584 36 100.0 35 .................................... GGCGGGTACGATCTTGATTTCGTACCTCATGGGCT 994513 36 100.0 33 .................................... AAATAGCCAGGTACATCATGCCTCCTCTAAGAG 994444 36 100.0 39 .................................... AGTCCGGCCCTCATGCCCGGCCCATGGAGCCGGCGTGGG 994369 36 100.0 34 .................................... GGACTTGTCGGAGTCGATCGTCGCATGTAAGACG 994299 36 100.0 34 .................................... TCACCGACAAAAACCGGAACAATGCGTTCCGGTT 994229 36 100.0 33 .................................... CCCGTATCTCATTTGGGTTTCCTCCCTGTTCTG 994160 36 100.0 36 .................................... CCGGAACCAGCCTCCATTATCTAGTGCTTGCCTGCT 994088 36 100.0 35 .................................... ATAGGGCTTCCGTTGCCCTATTCGCTAGCCATGCT 994017 36 100.0 35 .................................... GGACTCCCTCACAATGTACCAGTTTTCGGCTTCCG 993946 36 100.0 35 .................................... CGCTTCCGTTGCCCTATTCGCCAGCCAGGATTCCT 993875 36 100.0 34 .................................... GCATTATGCCCCATGATGTACCCTGCCATGAGTT 993805 36 97.2 0 ..................T................. | ========== ====== ====== ====== ==================================== ======================================== ================== 118 36 100.0 35 GATGGGATTCCGACCTGAAGAAAAAGGGATTAAGAC # Left flank : CGGCGGAGGTTGGCTGGAAGAATATGCCTTCATGAGGGCGCGTGAAGCCGGGCTGTTCGATGTCCGCATGGGAGTCACGGGAGCATGGGAAGGGGCGACCTCCGCGAAGAACGAATTTGACGTGTTGGCTTGCCACCGGAACCGCATGCTGTTTATCGAATGCAAAACACTCCGGTGGGACGGGCGGAAGGAACTCGACAACGACGTGGCGTATAAAGTAAAGAGCCTTGGCGAGGACGTGCGAGGGCTGTTGGGTGACACCTGGGTACTGGCCGCGCAGGAACCGTCGCCGACCTTGCGGGATCGGGCCAAGCAAGCGGGGTTTCAGGTGCTGAGCCCCAAACATCTGAGCAGCTTGACGGGATGGCTGAATCTGTGGAAACAGGGACAATCATGAACGGGAAGGGGGTGAGCAAAACATGTTCCAGCGCGACGGACAAACATGTTGCGCATCGGATCGTGGAACCAGCCGATATTGCGCGAGTTTTTGGTGGGGGGCG # Right flank : CGCTGGTCGGTCTCAGGGGTCAGTTCCCAGGAGTTCCGAGAAGGCTGCGGGAAAGAGCGCCGGCGAGGGTACACCGGCACCCCTTGTGAAAACTGAGTAGTGAAAACTAACCATCGCTCACTGATGTTTTCGCCCTCCGGTCGCCTCCGGCCATGTTTCCTAGGAGGCTGGCTTCAACGGTATGGCTTGGAGACGAGCCTCACTTCTCCGATCCTCACTTCTCAAGGGCGGCTGCGGACACGCTCAGAAAAGTAGAACGCCCCCTTTTCCCTCCTTGACACACTCTTCTGGTTTCAGATATCTTCGCTCGCGTCATTCAGAGTAGCGCTGAGGGATCTGGCCCAGAGACGCGCTCGGCAACCTGGTTCACAGCCACCAAGGTGCCAATGCCAGCCCGGTGACGGGGGCAATGAGGCTCTTCCATGGCAGACCCATGGAGCAACCAACGGCTTGAGATGCTCGCCGGAAGGTATTCGCTTCACCCCTCTGTCAGTCTCCCC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATGGGATTCCGACCTGAAGAAAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 2456753-2460281 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN885086.1 Candidatus Nitrospira inopinata isolate ENR4 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 2456753 36 100.0 37 .................................... TTCATCAACATGACGTATGCGGAGCCCACAGAAGATT 2456826 36 100.0 40 .................................... GCACCGACTGTGGCGTCCGGCGTGGAGACGCTCACCAACG 2456902 36 100.0 36 .................................... ACGGCATTCCCAATGAGGCGCCACCGCTCTCGTTCG 2456974 36 100.0 36 .................................... GAGTTAAAGCAGTACGGATTTCAGTGGATTCCGTAT 2457046 36 97.2 36 ...................T................ TGGACAGCTGGCATCATCCGAACTGCACGTGCTTCT 2457118 36 100.0 37 .................................... GATCCCTCGATCGATGCTCACGTCGGCGATGGCGAGA 2457191 36 100.0 36 .................................... GAATCGGAGGCCGGTGAATGTCACACGGGTGCCTTG 2457263 36 100.0 35 .................................... TCAGGAGTCTAGAGGTTGTAAGCCGCCAATACCTG 2457334 36 100.0 37 .................................... TTTTGCGTGGCGCGGGTGAAGATGCCCGCGCAATACG 2457407 36 100.0 37 .................................... GACACGTAGAAGTGCCGGTAACGACAGCAACCCCAAG 2457480 36 100.0 36 .................................... GCTAGCCATGTCTCCCGTTCTACGGGTTGCATCGCG 2457552 36 100.0 37 .................................... AGCGGTTGGCGTTTCGGTTCTTTTGCCGTGTACGCCC 2457625 36 100.0 37 .................................... ACGAGCTTCAACTGATTTTTGAGCGCACTCTGAACCG 2457698 36 100.0 37 .................................... GGGTTCTCAAACAACAACGTATCCACGCCTTCGAGTG 2457771 36 100.0 37 .................................... CCAGTGTCTTGGCGGTCGTATCGACGCTCCGATCCGC 2457844 36 100.0 38 .................................... GAAAAATGAAAACCGGAACGATAAACGAGACATACGTT 2457918 36 100.0 37 .................................... GGGGATACAACCCCCGAAGATTTGGAAGCCGCCCTCG 2457991 36 100.0 38 .................................... CACGAACACGTCGGCCACGGTACATGTCCGGTGGGGCG 2458065 36 100.0 37 .................................... AAGACCGTAGGAATCGCGACGGGGACACGGTATGGCC 2458138 36 100.0 36 .................................... CCCAACACCCTCTGACACCCTCCGACACACCAGCCG 2458210 36 100.0 36 .................................... GACCAAGCTGAAGAAATCCCTGGCGACCGTTGGCAG 2458282 36 100.0 36 .................................... CACGTTGAGTCTCCTTATAGCGCCCAGGCGGTTGAC 2458354 36 100.0 36 .................................... CGACCCCGCCCCACGCATCACGGCCCACCCATCCGC 2458426 36 100.0 35 .................................... CCCCCAGACCCCCCTCCGCTTCCCCCTCCGGGCAG 2458497 36 100.0 38 .................................... AACATGAGTTGTCCGGCGGGGAATTCTCCGCTCGCGAG 2458571 36 100.0 37 .................................... TACGCCAATTGTGTGCGTTTTTCGTCGAACGGGAGAA 2458644 36 100.0 37 .................................... CGGAACATCGGCTCACTCTCTGGTATCGTGACACATA 2458717 36 100.0 36 .................................... ATCAGGAAAAGGGCGTATCTGACCTGTTTTTCTGTT 2458789 36 100.0 39 .................................... CTCATATTTGAATTGTGTGCGAATGAGGGGCATATGGCT 2458864 36 100.0 36 .................................... AGGCGACACAACCCCCGAAGATCTAGAAGCTGCGTT 2458936 36 100.0 35 .................................... GATGTGGACTGGCTTGTGGAGCTCGGTGTGTGTCG 2459007 36 100.0 35 .................................... CCCGGATCGGCGGGCGCGCCCGGTGCGGTGCCTTC 2459078 36 100.0 37 .................................... CACAATCTCCCGTCTTTTTTGCTATGACGCGGGTGTA 2459151 36 100.0 37 .................................... ATCGTCCCCCAAGACTTGGTCTTCGCGGCGGCGGCAG 2459224 36 100.0 37 .................................... ATCGTCCCCCAAGACTTGGTCTTCGCGGCGGCGGCAG 2459297 36 100.0 38 .................................... CGAGAACGTGAAGAACACTAGGGGGAACTACATATGCG 2459371 36 100.0 36 .................................... GCGGTCAAGTTAATCGTGGTGCCGTTGGCGCAGTTC 2459443 36 100.0 39 .................................... CGCCGCCTCATGCCGTCCCTCCGTCCCGCCCCGGTCCCC 2459518 36 100.0 37 .................................... ATCCAGCAGTGAGTCCGTGACGAACATTCAGGTGCTG 2459591 36 100.0 36 .................................... TCGGAATCGCCGAGCACGGAGAACGCGATTCACATC 2459663 36 100.0 38 .................................... GAGTCATAGAAGAGGAACTGAAAAATAAGCAACAACCC 2459737 36 100.0 36 .................................... TGATCCGCGACCTGGCCGGCGTAGGCCCGTCTCCAG 2459809 36 100.0 37 .................................... GTGTCCGGACCCGCCCAAGCCACCCCCCCCTCCCCCC 2459882 36 100.0 35 .................................... TCTGCCCCCCAAGGGGGCATGGAGAGGAACCCTTA 2459953 36 100.0 36 .................................... ACGTCCGATGGCACTTTGCCATGCCGTTAAGGGGCT 2460025 36 100.0 37 .................................... TCATGGTGCGAGAGTGTCGCGAGGCTTCCGTCTAGAA 2460098 36 97.2 38 .......T............................ TCACAACACGCAGCGACCTCCTCGCTCGAACAGGACGC 2460172 36 100.0 38 .................................... TGGACTCCAACGCAGGCGCGTCGGAATGGGCGCGCTGT 2460246 36 97.2 0 ...................T................ | ========== ====== ====== ====== ==================================== ======================================== ================== 49 36 99.8 37 ATTTCCGCGGCTGAAACGCCGCGGCCCCATTGAAGC # Left flank : CCGATCCCAAGCGACTGCGTCGGGTGTATAAGACGATGAAAGGATACGGTGCGCATGTGCAATTGTCCGTCTTCCAGTGCGATCTGCCGGAGATGGACCTCATTCGGATGAAGGCAGCGCTGACGGAGATCATTCACCACAAAGAAGATCAGGTGCTGATCATCGACTTAGGGCCGACTGACAGTCACCCCATCAAGCGATTTGAAGCCTTGGGCATGGCGATCGAGGTGGAGGAGCGACAGCCTCGCGTGATATAGACGGTCTCGAGAGAAGATGCTCGTGCCGTGAGCAGCGCGAGCGGTGTGGTGATGAGCAAGCGATAAGCAGGCGCTCGCGTCACCGTATCGAGGGCAAGAGAAAGCAACGATTCATAATGGGCAAAAGAGAGATGTTGAAGGAGGTGAGTGCAGAGATATCTATGACAGGAGCATTGAAGGTGTTGGTATGTGCTCGCAACGTGCGAGTAGGAGAGCAAGAAAACAGGCACATAGCCAAGTGCC # Right flank : CGGGGCCGAAGTTGTCTTTTTTGAGGAGGAGCCTCCGCAGGCAAAATCTGTTGAATTGGATATCTGACTTCATGGCAGATTACTGGAGGATGGGGAAGCCGAGTGAGTGCCAAGAGGGAAACGGCGCGTTTCAAGATGGAGGACTGCTCGTCCATGGGTAGCATGGGTAGATTGACTGGTAGGGTGGTGATTGTGACCGGCAGCAGCAGCGGCATCGGCAAGGCCATCGCCTTCCGGTTTGGCGAAGAGGGAGCTACCGTGATCGTGACTGCGCGACGGCTTGGGCTTTGTCAGGCGACAGCGGATCAAATTGCGAGCAAGGGCGGAGTGGCCTGGGCGATTCAAACGGATGTGACCGACGAACAACAGGTCGAGCGGCTGTTTGATGAGACGGTCCGTCGCTATGGGCGTGTCGATATTTTGGTCAACAATGCGGGTGTCTTTGGAGGGAGCCGGCTGGCAGAGACATCCACACGCGAATTTGATGAGGTCATAAACGT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCCGCGGCTGAAACGCCGCGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-12.30,-12.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 3 2530668-2532863 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN885086.1 Candidatus Nitrospira inopinata isolate ENR4 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 2530668 37 100.0 37 ..................................... ATGACATCGACGACCGAGAGCATCTGCCCGTAAGTTT 2530742 37 100.0 34 ..................................... ATTCACGTGAGCTCCATTGCTCGCGTCTGCTATT 2530813 37 100.0 34 ..................................... CGAAATACGGGGTATTGGGATTGCATATGCAAAG 2530884 37 100.0 34 ..................................... CGGATGCCGCGGATCAGCTTCTTATCAGGCCACA 2530955 37 100.0 35 ..................................... CAGATAATTGAGCTGCTCGCTACACACGTGGATGT 2531027 37 100.0 34 ..................................... ACACTCCATCCCCAGCCCGCAACGACGGATACCA 2531098 37 100.0 35 ..................................... CCCGCTGGACGGAGCTGATGCTGGCGCCGCTCACC 2531170 37 100.0 34 ..................................... GAGCTCGTGGAGCTGCTCGCCACACACGTGGATG 2531241 37 100.0 37 ..................................... GCCATCGGTGCCTCCTTGTCTGGGGGCCTCAGCCCCC 2531315 37 100.0 36 ..................................... AGGCTCATGGTGGACGGCAGAGCCGTCGTCGTGCCG 2531388 37 100.0 35 ..................................... CGATCAGAGGCCGACCTGGCGCGACCTGCTCGCCG 2531460 37 100.0 35 ..................................... TTTCATACCACGTCAGAATATAGAGCATTTCCATA 2531532 37 100.0 35 ..................................... CCCTCCTTCTGGCGGGGAGTGTCCCCGCCAGGAAT 2531604 37 100.0 34 ..................................... TTCGAGCGGCGTGAAGCCCGCCGCCCGGAGCGCG 2531675 37 100.0 34 ..................................... CTTTGTGGAGGCCGCGTTCGGCGATGACCGCCGA 2531746 37 100.0 36 ..................................... CGAAATCAAAATCCTACCAGCCAAGCCTGGAGGGTA 2531819 37 100.0 34 ..................................... AAGCGAATGCCCAACGGGGCCTATACTCTCAAAC 2531890 37 100.0 35 ..................................... TAAATCATCGCGTTCCCCCTCGAACACGTAATCCT 2531962 37 100.0 36 ..................................... TTCCCGTACTCTATCTTCCATGCCTCACGTCGGCAG 2532035 37 100.0 35 ..................................... CTGTTTTCGTGAACACGGCTTCATCACCCGACGTG 2532107 37 100.0 37 ..................................... TACCCGTACAACAGCGCCATGATCAATTCACGCTGAC 2532181 37 100.0 34 ..................................... CACGACGCAGGCACGTACGGATAGGCGGCTCCCC 2532252 37 100.0 35 ..................................... GCCAAGGAATTCGACCGTATTGTCAGGCTTCAGCG 2532324 37 100.0 34 ..................................... GCATGATGGTTCACGGGTTATCGTGGACATTCTC 2532395 37 100.0 35 ..................................... AATCGATTTATGGGCGGAGACTCGGCCGTGACACT 2532467 37 100.0 35 ..................................... CTGGCGCGGCATGACAATTTCCCTCCTTCTGGCGG 2532539 37 100.0 35 ..................................... CGGTATGATGGAGATCGAAGGACCCCGGCCTCGGG 2532611 37 100.0 35 ..................................... TGCCTACAGAGTAGACGTGAGCAATGGGGCTCACG 2532683 37 100.0 35 ..................................... GAATACATGCGCGCCGAGCATTCTGCCCTGGGCGC 2532755 37 100.0 35 ..................................... TGACAGGACTCACGGACACGTTTTCCTCAATCATC 2532827 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 31 37 100.0 35 GTAGCGCCCGCTCGAAAGGGCGGGCGAGGATTGAAAC # Left flank : TCCGCCGTATCTGCATCGGTAGGGTAGAGGGATGAATGTGCTCATCACCTATGATGTTTCAACGGAGACAGCGGCGGGACGCAAGCGACTACGCAAAGTCGCGTTGACGTGTCTGGATTTCGGGCAACGGGTCCAGAAATCGGTGTTCGAATGTTCGGTCAGCGAAATACAGTACGAGGAGGTGGTGCGGCGGTTGTTGAACATCATTGACGAGAAAAAGGACAGTCTGCGGGTCTATCGTTTGATTGAGCCGAAGGAGAAATATGTGAAGGTCTATGGAGTGAACACGTCGGTCGATTTCGAGGAGCCGTTGGTTCTGTGAGCGCGGACCTGGAGCGCTGAGAAAAACCAGGGAGGGTCGCGATGAAGTTAACCACTGGTTTGAATAGAAGATTTGGTGAATGTGAGGGGAGCGTCGCTTTGGAGCATGAGAGGTGTTCTCTCGGTTCGCGCAGAGATTGCCTCAAGTTAACGGTAGTAGAAGGTTTTGCAGTAGTACT # Right flank : CCGCCTCAACCGGTCGTGGTGGAGTTGTGCGCGGCCGAATGTTCCCCACGCGAGTGGGGATGAACCGGTGTTGTTAACTCTCAGGGTGCCGTTTGCTGAGGCCTGAATGGCGCCATGTCTCGATCCGGCGAGAGGGGCTAGAGACGGAATGATGTTTGTCCATGTAGGCGATCTTCCGGCATTTTCTATGGCCTCTTATACAAAAGGTGGAGTCCGCGCTTGATCGCGAAATCGCGGCGAAAATCTTCATCCCCATCTTCTGTGGATAATCATGTGGATAAGTCTGTTTGGTGCGTTCAAATATCGCACAAACGACGCCATATTTACCGATTTGCCTATTTTTTAGGCGTCTGTAACGCGTCGTGGAAACCACAACTAATTGTGGGCTCGCCAAAACTTTTTGGAAATGATCTACATTTTGTTGGAAAACTGCTTGACATTGTGTGTTCAGCGCGACTGACGCGGCGTTCCGATCAGCCGTTTGTGTTTTTATCCACAGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGCGCCCGCTCGAAAGGGCGGGCGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-17.50,-12.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : NA //