Array 1 30066-31454 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWUR01000016.1 Acidaminococcus sp. BV3L6 contig00028, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================= ================== 30066 35 100.0 26 ................................... ATTAGGGTTGGCTGCGTTTCCTCCGT 30127 35 100.0 26 ................................... GTCTAAACTGGTCGAAATCGACCAGT 30188 35 100.0 26 ................................... ATACCTTTTGGTAGTATTATCAGAAA 30249 35 100.0 27 ................................... TAGATGGCTTGTTTGACAGCCTCAACC 30311 35 100.0 27 ................................... GCGCCTTCCAGCAGCGTCAACCCTGCA 30373 35 100.0 26 ................................... ATAGATTGCCATAAGATATCCCCCTT 30434 35 100.0 26 ................................... TTCTTTGGCGAAGCAACCGCCGATTG 30495 35 100.0 27 ................................... TAAAACCCATGGTATATAGCGCTTGAG 30557 35 100.0 27 ................................... GCAATTTTTTGGCCCTTATTGATAGGG 30619 35 100.0 27 ................................... AGCGAGTCGAGCCGCTTCTCGCTTGGT 30681 35 100.0 26 ................................... TTAACCTGCGTGCCTTTGCGGATGCA 30742 35 100.0 27 ................................... TTATCAAGGATGTCGAACGTTCCATGT 30804 35 100.0 27 ................................... ACACGGAAGGTGATTGAAAATCAACAA 30866 35 100.0 27 ................................... TGACGAGAAAACGGTTTGTGCGGGTGG 30928 35 100.0 27 ................................... AAATGATGTGGAGTGGAAGCCCGTCGA 30990 35 100.0 27 ................................... TTGACAACAAATGGGCGCCGTCTGTTC 31052 35 100.0 29 ................................... CAATGGGCGGAGACCCAGCATCCATTCGG 31116 35 100.0 26 ................................... ATCGCCGTTCCAAGTCTTCCAGTCGA 31177 35 97.1 27 ........G.......................... TTTTTGGGAACGTCGATGTCAACGAAG 31239 35 100.0 26 ................................... ATGTAAGCGAAGGCGTTCCGGTTCAG 31300 35 100.0 28 ................................... GAAAGTGCGGAGTCATAATCCTTTGGGT 31363 35 94.3 23 ................................A.C GATAGCCATTGCTCCAATGCAAT 31421 34 71.4 0 .C.....C.-T.....GT...TG......T.G... | ========== ====== ====== ====== =================================== ============================= ================== 23 35 98.4 27 GTCAAAAGACCTTTTTAATTTCTACTCTTGTAGAT # Left flank : TTTTAGACTATAAACGTGACATTTTCTTGTATATCCAGCAATATTACAGGGCTTTTATGAAACACAAAAACCCTGACGAGTTTCCCCTCTTTATAATAAAATCATGATTATCCTAAGCTATGATATTTCAGATGATAAACTGCGGGCACGTTTTGCCAAATATATTCTAAAGTTTGGTCATCGCATCCAATATTCAGTTTATGAAATTGATAATAGTAAGCACATATTAGATAATATAATTTGCGAAATTCAGAACCATTTCATGAAAAAGTTTGATCAATCGGACAGTATCCTCATCTTAGAATTGACTTCATCGTGCAAAGTAATTAAAATGGGATATGCAGCTAATGAAGACTCTGATACGGTCATTGTCTAACCTGCAAACCTCCAACTTACTATTGCTAAGGAGTATATATTTTGTATAAAAGGTCTTTTTTCAGCATATTTTTTCAATATATGGTCTTACTTGGCGCCGAAAATGCATTCATATGCAGATAGGG # Right flank : TTTGAATTTTCCTTTTCCTATCACGCCTTTATCTATTCAACAAAACCCTTTCGTTCTTCCTGTAGCGGAAGGGCCTTTTTCGGTTCTTTGTCAAATTTTGGGGTGCTAAAGTGTCTATGCACTTCTGGAGAGGACATGCACTGAATACAGTGCGTGTCCTTTTTCGTTGCGTGTGTTAATGTACAAGCTCCTATGACGAAAGCGCTCAAAATTGCGCAGACCAAATGAAATCCGTTTTAACACCTTGATTTTATTGCTGCAGCCTTCAGTAAAACCGTTGGAGTAAGGATATATAAGGGCGCTCCTGATTTCTTCGTACCAATAGGTAAAGGACTTAACCAGAGAGTTCATTTCCGGTAAATCAGCGCTTTTTACTAGGTCTATCCATGCTGAAAGTGCCCAAGAAATGTTGGCATGATCTTTGAATCGAAGCACCTTGGAAAATGCGTATGTTAGCGCGTAAGCACATCTTAGACGAGGGAAGCAGCGAAGGATTCCCT # Questionable array : NO Score: 3.02 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:-0.15, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAAAAGACCTTTTTAATTTCTACTCTTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 96043-98765 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWUR01000038.1 Acidaminococcus sp. BV3L6 contig00003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 96043 33 100.0 34 ................................. GCGTGATGTGCGAAAATCTCTTGAAGCGCTATCC 96110 33 100.0 34 ................................. CAAAAAACGAACCAAAACAAATGTACCCATTTTG 96177 33 100.0 35 ................................. CAAAGCCGGGAGATAGTCCGTGAAGACAACCTGCT 96245 33 100.0 33 ................................. AGGATGGCCTTGACTGCAAGTTTGTAGAGAAAG 96311 33 100.0 33 ................................. CCGCATTTGCCCATACTCATCAAGGACGGCCCC 96377 33 100.0 35 ................................. GCTGAGGCCTGTGGAACGACTGGGGGCTGAGCGGG 96445 33 100.0 34 ................................. TCGTCCCCCAAAATAGTCCAGTCATCGTTTATAT 96512 33 100.0 35 ................................. CAGGCTGCCAAAGTACTGCAGCGCCTCCCGGTCAC 96580 33 100.0 33 ................................. TACAAATGGAAGCGAACATTGCCGCAGTTTGCG 96646 33 100.0 35 ................................. CAGCCTCGTTCCTTGGCCATCATGGTGATGGTGGC 96714 33 100.0 34 ................................. CACGTCGACTACTACGATATCGGCCTGAGCCTTG 96781 33 100.0 35 ................................. ATGGGGATGCGCTTGAGCTACTTAGACAGCTTGAG 96849 33 100.0 34 ................................. TTGCGACGTTGGCGTCCTCGTTGCAACAATAGTC 96916 33 100.0 34 ................................. ATTTTCACGACTCGTTCCCGAGAACTAAGTTTTC 96983 33 100.0 33 ................................. TAGCTGTCATGGGCGTTGCCATGAAAGTCCCGA 97049 33 100.0 34 ................................. CGGTATAGTTTTTTCCCATAAAACCGCCCAAAAG 97116 33 100.0 36 ................................. CGCCGCTCTATCAAAATCAATATTTTTACGGAGATA 97185 33 100.0 34 ................................. CGGATGATATGATGGCTGAAATTAAATATCCATA 97252 33 100.0 34 ................................. TTTGCTGGTCGGTTGATATTTTGCTGGCACGCTA 97319 33 100.0 34 ................................. AGCGTGCCCGGCCCTAAGTGATATCGGGCTGGGT 97386 33 100.0 33 ................................. TTTAACGTCATTTTCAAGATATATTGCATTGCG 97452 33 100.0 36 ................................. GATTAGAGGGCGGATGCGATGGTGAATTGGAATAGT 97521 33 100.0 34 ................................. ATCGGTTGCCTTTGCCGGGCTGAAAATATCAAAG 97588 33 100.0 34 ................................. AGCGTGCCCGGCCCTAAGTGATATCGGGCTGGGT 97655 33 100.0 34 ................................. TTAGTGCTTAGCGGCGTAGGCGCGCCAGAAACTG 97722 33 100.0 35 ................................. CAATTTTTTAAAGCGTTATCAATAATTTTCATGGC 97790 33 100.0 33 ................................. GCAAAAAGCCAGGAAGCCATCTGGCTGATTGCA 97856 33 97.0 34 ...................A............. AGCACGTTTCCGGTCGCTGATTGCGGCTTTAACG 97923 33 100.0 34 ................................. ACAGACTGACCACAAAGTGTCTCCCGTGTAGACA 97990 33 100.0 34 ................................. TTTTTGCGCCTGGCCTTACGCTCCTGAGTGCCAC 98057 33 100.0 36 ................................. AATAGATTCCTCTCTTTGCTTATCTGAAGAAAAACG 98126 33 100.0 34 ................................. AAAGCGATGGAGGACTGAACATGAACAACACACA 98193 33 97.0 35 ................................G CGCAGCGGAGCGGACGGTATATCAGGCAATGTACC 98261 33 100.0 35 ................................. TTGTCTATGCTCCGCCAACCTCCGTGGTATAGACT 98329 33 97.0 34 ................................G CCGGTCAGCAAGTGCCGGACGGATAATCTCAGAC 98396 33 97.0 34 ................................G AAGAAACTCTATGATATGATATAGACAACAAAAG 98463 33 97.0 35 ..............A.................. CTGCTCAGGGATAACGGTCGTCTCCATTGGCTCGC 98531 33 97.0 35 ...............G................. GGGTCTGTATATAAGCTAACCGGGAACAGACGGCG 98599 33 100.0 34 ................................. CCAACCACAATCAACTGGCACTCGGTAGTTGACG 98666 33 100.0 34 ................................. CGCCCCTGCTCCGCATAATCCCGTCAGTCCAAAA 98733 33 93.9 0 .........T...C................... | ========== ====== ====== ====== ================================= ==================================== ================== 41 33 99.4 34 GTCGCCCCACGCATGTGGGGCGTGGATTGAAGT # Left flank : ATGCTTATCCACCCTTTTTTTGGAAATAAAAAGGAGCGTGTGTTGTGTATGTTTTAATTACCTACGATATCTCTACAGAGACAGAAGCGGGGAAACGGCGCTTGAGGCGGGTGGCAAAAGCTTGTGTCAATAAAGGCCAAAGAGTGCAGAATTCAGTCTTTGAATGCAAATTGGATGAAGCGGAGCTTGTGCTTTTAAAAAATGAACTACGAAGTATCCTGGATGCTGAGAAGGATAGCATTCGTTTCTATAGACTTAGTAAGAATTATAAAAGTAAAATAGAAACGATGGGTGTCAACAATGGGTATGATATAGACGGTGCAATCATCATTTAATGTGCACCAGTAAAATGATGCGAATCTCCGGTAATTTGAATTCTACTAACGGTTTCGCACTTTAGATTTCTTATCATATAAAATATTGCTTATGGAAATAATCGATTTTATAAGGTAAAATGATAAGAAGTGCTGGATATTGTGAAAATTACACAATATGTAGCT # Right flank : TAATGTGAACGGTTGATATTATCTTGAAAGCGGGACGGTGTTTTTGATAACGAAGGTTGAAAAAGATACAAATTCAAGCAAGATATACATTGACCTTGAAGTTGCTGATAGCCAAAAATAAGGGAGGACGTCTATGAAGAAAGAGAATCTCAGCCGTTATGATAGCGAAGTATGGAGCGACAACTCCAAAAATTGCGAGCAATGCAAAGACTGTATTTTTACGACGATAGAGGAATACCAAAAATGTACTTGCGAGATATACACTGATATGTATGATGACCCAAAACCCAATGACGTTATATTCAAAGGAATTCCGTGCAAGTATTATCAGCGTTGCGAGTATTCCCCGCGCACGCGGGGATGAACCCGCCACCAGCGTCGAATTTCAGGCGGCGTATGGGCATTCCACGCGCATGCGGGGATGAACCTAAAGAGGTGATCATCATGGGGTCTAATTCAAAAATTACGGCTTTACTTGGTTTGTTGATGGCACTTCCCAT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCACGCATGTGGGGCGTGGATTGAAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.30,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //