Array 1 17624-18568 **** Predicted by CRISPRDetect 2.4 *** >NZ_JMPN01000009.1 Leminorella grimontii ATCC 33999 = DSM 5078 strain ATCC 33999 GLGR.assembly.09, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 17624 29 100.0 32 ............................. TAACGCGATACAGCAGAGATCGAGCCAAACGC 17685 29 100.0 32 ............................. TCAGCCACCCAGGCATAAGCATCTTCGCCTGG 17746 29 100.0 32 ............................. TAGATCCGGGTTGATAATGCTTCAGTGCTGGA 17807 29 100.0 32 ............................. GGATGCAATGGATTGCAGAACGCTACGCCTCT 17868 29 100.0 32 ............................. GACTGATAACCACTCTACAGAAGCGTAGAAAT 17929 29 100.0 32 ............................. AAACCGGGTATACTAAGTTCACGTTCATGCGC 17990 29 100.0 32 ............................. TGTTCACATCAGTAACGCTGTGTTTCGCGGTA 18051 29 100.0 32 ............................. CTGAACGTCGAAGCCGGCCTCTGTGGCCGCAT 18112 29 100.0 32 ............................. AATGTATATATATTATTTATAGGCAGAAGTCA 18173 29 100.0 32 ............................. CCAGGATCATGCGACAATTCCAGCGCAGTTGC 18234 29 100.0 32 ............................. GGCAAAAAGCCGGTGAAGATGTTCCGCCGCCT 18295 29 100.0 32 ............................. TCCGTTAACGATCAAGACCCGGTGATGTCAAT 18356 29 100.0 32 ............................. GTCACGCGGTAGCCGCGATCGGCGGTCCATAA 18417 29 93.1 32 ............TT............... CGGCCTTCCGCTTTCCAATAGGGATATTATAC 18478 29 96.6 33 .............T............... GCAGAACGTCGCGAATTGATGCGTCGGCATGGC 18540 29 82.8 0 ............T............TAAA | ========== ====== ====== ====== ============================= ================================= ================== 16 29 98.3 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GGGCCTCTACCAAAGGGCGCGCCGGGGCGAAATCCCTCAGTTTACCGGCATCGATCTGCCGTACGAACCGCCGCTAGAGCCAGCTGTGCGTCTCGACGGCCAAAGGCCGGTGGAAGAACTGGTGGCGCAGCTGGTGGCTGCGCTGCGGGAGCGGGGGATTGTTGGAGCGAATAGGTAAGAAAGTAGAAAGCAGGCTGACGCGCAGCGGCTTTTGTCAGCATGTTGGCAGTAAGCGGAGAGGATGAACCGCTGCTGTCGGACTGAGTGCCAGCAGTTATCTCACTATTTATTTGATTATTAATGATAAAGATGAAATTTTTCCACCGGAATGTTTGACCCTATGGCTAAAATAAAACCGTTCCGGTAGATTAAGGGAGAACGTTAGGCGTGATATTTTTTTCTATAGTGATTAATGGGTTAGCGTTCTTTAAAAATAGGGATATGCTGGTGGACTTTATTGGTGGATAAAACATTTTTAAAATCAATTGGATAGTTTTAGA # Right flank : ACCCCAAATTATTTTTCTGACTCAATACCGCGCCGATCCAGCTCTCTGCGTAGTAACCGTTTAATCCAGCCAGCCTTATTGTCATCGCCATCTTCTTTCATGGCGATAGTCAGCCTTTCCGATAAATCAGCATCTAGGCGAAGTTGCACGACGTATCGCTCTTTTTGATGTTCGTTGGTTGACATTGGTTATCACTCATGTATATTTTGTTTGCTGGTTTTAAATGTACATCAATGTATAGCAATCAGTAAAGCAACGCCTCGGAGTGCTGGAACACATCCGAGGCGTCTAACCACAACATTAATAGGAGTAATGCTATGGCTACCGCCAATGGTATCACGCACGCACATCCAAATCTCTACACTTTCCTGAACGTCCGTTCCAACTGCCCGCTCTGTGAAATTCAGCAGCTGATTTCCATATCGGCCACAACGGAGGCCGAAGCTCGTCGCCTGTTGGCCAGTCTCCCTCTGGTGTCCGTCTCCTGTAAACCGCAGGAG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //