Array 1 637-791 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIOO010000039.1 Coprococcus comes strain MSK.11.50 NODE_39_length_23242_cov_314.238, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 637 29 100.0 34 ............................. TAAATTATACTGCAAAAAAAACCAACTGACTGTG 700 29 96.6 34 .......................G..... TTATTTGCGCTGCAATCGCAACCAACTGACCTCT 763 29 96.6 0 ...........................C. | ========== ====== ====== ====== ============================= ================================== ================== 3 29 97.7 34 CTGGATGTCAGCAAGAATACGGCATTGAC # Left flank : CCACGGCATTTGCCGAGAGCGAGACGGAAGAAACACCTGTATGCACCTGCGAAATAGCTTGCACGGAAGAAACAATGAACACAGAGTGCCCTGTCTGCGGTGCAGAGGGTGCTTTGGCAGAAAACTGTGGGAAACATGTCGAACCAGCAGCCGAGGGTGAAGCATCCCAGCCGGAAGGAGAGGAACTTCAGGAGAACCAGGACAGCGATATGCCGGATACACAATCCGAAGCAGCTCTAGCACAGGTGAGCGGCGAAGGAGAGAATGGCATCGCTGTTCAGAGTGCCGGTGTTGCTATTGACAATACCAACTTTCCGGATGCAAATTTCCGCACTATTGTTGAATACTATGATACCAACAAGGACAGTAGTTTAAGTGATACAGAAATCGCAGCAGTTGAAGAAATTGATTGCTATGACAAAGGTATCTCCAATCTGAAAGGCATTGAATACTTTACAGCACTTCGTTCGTTGAACTGCGGTTACAATCAACTGACCTCT # Right flank : CGAGCGTATCGCTCATGGGAAGCCACTAAGGAACAGACTGCTGATCTGTATCATAGGATTCTAACCTCTGCCGGGTACTCCGCCAGCTCCTTAGAGAAGTATCATTATCTTTCTGACTGTCATCGCCATGTCAGGAGCAACCTGACACTCATACCGGGAGTTCTCGCTGTTCTGCATCCACAAAAGTTATGGCGTACCCGATAAGGTGGCTATCATCAGAATTAACGTCTTAGTGACCTGTATATTCAGTTTTCAATTCAAGTGAAAGGATTCCATTTTTATTGATTGGAATTACTCCCTTCACTTATTTGGAATTGCTCAGGCTTTTGACACCCTATTTTTTATAAATTTTTTTAATTATTTTTTTGAGAGAGATTTTAGAACAATAGATAAGTAGAAAAAGCTTCAAATCCCGTGTATAATTAAGAAATAAAGATAGAAACAAATCGGAAGTTGTGAACTTAGAATTAGAGGTGTTGAAAATGAAAATAATAATTATA # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGATGTCAGCAAGAATACGGCATTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 137841-139889 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIOO010000003.1 Coprococcus comes strain MSK.11.50 NODE_3_length_140949_cov_212.204, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 137841 30 100.0 36 .............................. TCTTTTAACAGTTCGATCTTTCCGTCTACTATTGTC 137907 30 100.0 35 .............................. AATACGCAGAAAGTGAACTGAAAGATCTGGAAGAT 137972 30 100.0 35 .............................. TTCATTAAAGTAAATTTTTTTTCATCTACCATGTA 138037 30 100.0 35 .............................. CACCAGTTTTCTCCGCAGATATCCGTGATGTAATC 138102 30 100.0 36 .............................. CTCCTTTCACCCATGCTTTCCCGTCTTTCTCCTTTG 138168 30 100.0 37 .............................. CCTGTAATGTCAGAAGAAAAGTCCTTTTCTGTCCATC 138235 30 100.0 36 .............................. TCCCAATACTCTGCGATTTCCTGTGCTGCCGGTAAG 138301 30 100.0 35 .............................. AAAAAGACATTATAAATGGTACAGTGAGTAGTATA 138366 30 100.0 35 .............................. GATGCGGACAATGCCGACAGTTTTAACGATTATGT 138431 30 100.0 35 .............................. ACTTGGTATTCCCTATGAATTTGGTGAATGGACAG 138496 30 100.0 35 .............................. TTACGAATGAGGCACTATCTGTACCGCTGATATAT 138561 30 100.0 35 .............................. AGAAGCATACCAGTCAGAGCCATTGAAAGCAATGA 138626 30 100.0 35 .............................. GACCGAGTCCACCGGCCATATCCCCAAGTGCCGCC 138691 30 100.0 36 .............................. GCTTGTCCGGCACATCATCAATGGTCTTAACACCTT 138757 30 100.0 34 .............................. ATTTGCTGTACAATACCTTCGACAAAACCACAAT 138821 30 100.0 34 .............................. TTATACTCTTTGTTTTCTTGTGCTGTCAATACTC 138885 30 100.0 36 .............................. ATGGTATATGTAATTTTCACTTTTTCCTGCTCTTCC 138951 30 100.0 34 .............................. AGTTTGAGTGTACAGCTGATCTTGAAAACGACAG 139015 30 100.0 34 .............................. ATTAGTGGTTCTTTTAGCTTGAAACCTCCAAGTG 139079 30 100.0 36 .............................. ATCAGTTGCACTCTAAGTAAAAGCATGGTGCCCTTA 139145 30 100.0 35 .............................. GTTCTTCGATGGTCTTATCTGCCATCTTTAACGCC 139210 30 100.0 34 .............................. GCGCAATTGTGAATGCTTTTACGAGCCAGAACTG 139274 30 100.0 35 .............................. GAGACTGCGGGTGAAATAAATCACGGTTGACAGCA 139339 30 100.0 35 .............................. TCAGGTCGGCCTGTGCCGTTGCCGCAGCGGACTGT 139404 30 100.0 36 .............................. TTTGTAGTTCCAGGAGATACTATAATCAATGGCGCT 139470 30 100.0 34 .............................. CTCAATGAAAGAGTGAAAGAAGCAATGGAAAAAA 139534 30 100.0 35 .............................. GAGCTACCGGACGCCGGGTTGCCTGTTCCCTCCCA 139599 30 100.0 36 .............................. CATTCGGATTGCTGATACCATTCAGCTGCGCAACCT 139665 30 100.0 35 .............................. TTCATGATCTGCTTCTTTGCAGCTTCACTAGAGAA 139730 30 96.7 35 ............T................. GCAGAGAAGAAATTACCAGAAACAGTACGGTAAAG 139795 30 100.0 35 .............................. GTTTACTTTTGAGGAAGCAAACGCGGAACTTGCGG 139860 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 32 30 99.9 35 GATAAACAATAACATGAGATGTTTTGAAAT # Left flank : TTGAAAGAAGGGATGTAATGAAAAAGAAGAAAGAATTGAATTATAATTATGCATTTTTGTTTTATGATGTGAATGAAAAACGAGTTCAGAAAGTATTTAAGATCTGTAAAAAGTATCTTTCACATTTTCAAAAGTCTGTATTTAGAGGAGAGATGACGCCATCAAAGTTTATACAATTGCGGAAGGATTTGAACCAGGTAATAGACAAGGATGAAGATTTTATTTGCATTATCAAGTTGATGAATGACAATGTGTTTGGAGAAGAAGTTTTGGGAAATGGAGGGGAGGTAACAGGAGAAAGTTTAATGATATAATTATAGGATTTTTACCAGGCGGAAAAAGAATGAAAAATCCAGGAAAGCTTGAAAAATTAAGAGATTTATGGGATGATAAGTAGGGCGGTCCAGGATAAGGGTGTTGGCTGGTAAAAAATGGAGAAATATAGAAAATATAAGGGGAAAAAGGGGAGGGGAGAAACTAAAAAACGCGGAAATGCGAGG # Right flank : TAAAAAAATTGCACTTGCAGGTTTGAAGAGAAAAGAGATAAATAATAACCTTTTGTGGAGCAATACACAGTTTACATTTTAGAATCTGTGGAAAATATAACGAAGAAAAATGGAGAATAGATGAAAAAAGTAAGATGGATTATTTTCGGAATGTTAGTAGCTTTGCTTGCAGGATGTTCTGGAAAGAAAACAGCAGAAACTTCTGTGGATGCAAAAAATGCGGAAAGTACAGATGAGAAAAATACGCTTGATTTTGTAGATGCACACGGAGAGCGTTATACGGTGGAAATCAATGAAGCAGTTGCGAAGAATCCGTATGATAAAGCACTTTTTGTAAAAAATGAAAATAAGATCAGCTATGAGGATAAGAAATATACTTCAAGGCTTGGCGTAGACGTATCTGTTTTCCAGGGAGATATTGACTGGGAGCAGGTGAAAGCAGCAGGCTATGAGTTCGCAATTTTGCGGATCGGATATCGTGGCTATGGTGAAGAAGGTAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACAATAACATGAGATGTTTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //