Array 1 34652-35148 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOHL01000005.1 Staphylococcus epidermidis strain Col-B036 corpoica-T_BGSABV:Staphylo-Col-B-036_c00006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 34652 36 100.0 29 .................................... TAAAGCAACAATGTTATTTATCGGTTCTA 34717 36 100.0 30 .................................... TAAAGTAATGTGACTGCTCTTTTTTACTAA 34783 36 100.0 30 .................................... CAGATAATTATTCTAATGCGGCTGTTATTG 34849 36 100.0 30 .................................... TTTTAGGTTTATACATATATGTAACGTTTT 34915 36 100.0 30 .................................... TTAACTTCTAGTATATTCAATCCAGTATCT 34981 36 100.0 30 .................................... GCAGGTGGTTATGCATATGTGTTACGACCT 35047 36 100.0 30 .................................... TCACTCCTTTCTGCAATAATGGGTGGGGTT 35113 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 100.0 30 GTTTTAGTACTCTGTAATTTTAGGTATGAGTGAAAC # Left flank : AAGGGTTATATACAGACTTTGTCATCGTTAATCAACAAGGTCATCGTGTTCGACCAGGGCAAGGCTATGTACATCATGTAGCAGTCAATCTTCCTACAGATACAGACTTAAATGACATTTATGAAAAAATAGCACGACAACCCAACCCTAACTCCGGCATTATCGATCGATACTTCTTTAAATCATTATACTATCGACATAACCAAATACTATTTGAATTTGCGACAGCAGAGCCAGGATTTACCGTTGATACACCCGTCGATAAACTAGGTCAACAACTCAACCTCCCCGATTTTCTAGAGGACAAAAGAGACGAGATTGAAAGCCAATTGAGAGAAATATAGAGGACAATGTTAAAGCACTCGCTATTACGGCGCGTGCTTATTTGTGGTTATAAAAGTAGATTTTTATTTGTTTAAGATATATATTTAGATTATCAAGTAGATAATACGAAAAATGGATTACTAAAATTTTTAGTAGTAGAGTTTTATATGCTAGAG # Right flank : CGGTGTTTTTAACAAGTCTAATCCCGTATGCGTTTTAGTACTTTGTAATTTGAATATTGAAAGTATAATATTTTAGTTGCAATGCTATTGAATAACAATTATAATTTAATTACAGAGAACAAGTTTAGCTAACTTGTACTCATACCTAAAATTACAGAATCTACTGAAACAAGACTATATGTCGTGTTTATCCCACTAATTTATTAGTGGGATTTTTTGTGTTTTAGTACAACTTCTGTAGAAAAAATATAAAAAGTAGTGCCACGTTTATTGGTTTTAAATTATAATAAAATAAAACAAATAAGGTGGGTGTAAACTATGAAAGAAAAATATATTTTGGGTTTAGATTTAGGTATTACATCAGTAGGATATGGAATTATTAATTTTGAAACTAAAAAGATTATAGATGCAGGCGTTAGGCTTTTTCCAGAAGCAAACATAGATAATAATGAAGGTCGTAGAAGTAAAAGAGGATCTAGACGATTAAAAAGGAGAAGAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATGAGTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.23%AT] # Reference repeat match prediction: F [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 40889-41384 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOHL01000005.1 Staphylococcus epidermidis strain Col-B036 corpoica-T_BGSABV:Staphylo-Col-B-036_c00006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================= ================== 40889 33 100.0 33 ................................. AACAAATGTTGATATTGATGAATCTATTATTAA 40955 33 100.0 33 ................................. AACATAAATCAACATTCGAGAAGAACGCTAAGG 41021 33 100.0 33 ................................. AACATGATTACTATTATACAATTGATTATCTAT 41087 33 100.0 32 ................................. AACTATCTTGAGTTAACACAAAATAACTTGAT 41152 33 93.9 33 AG............................... AACGAATTGGCTCCAAATTCTTTGTAAGAGCAT 41218 33 100.0 33 ................................. AACTAACATCTCATTCTGTTCCAGGTACTTATA 41284 33 100.0 33 ................................. AAACGTTACTGAACGTGGAATCGACTTCGAGGA 41350 33 100.0 0 ................................. | A,A [41378,41382] ========== ====== ====== ====== ================================= ================================= ================== 8 33 99.2 33 GTTTTAGTACTCTGTAATTTTAGGTATGAGTGA # Left flank : ACAATACGGTGGCAAGTTGCTATTAATATATTTGTATCCTGAAGCAAATTTAAGTCCAAAAGAACAAATACGTTTGAAAGAGTTAATAATATCACTTGGAATTGATATTATAGTATTAACAGGGTCATTGCATTTTTTAGCTAAGGATTGGAAGTATAATAACTATATTAGATGTGATAATCAAAAAATATCATCTGAATTGGTAGATAATCTACTTTGGAATGCCCCATTAAATTTTGAAAGAAGTGAAATAGAGCAGAGTTTAAATCAATTTATATTAGCTTACCAAGATAAAATCGAAATAAAACCGATTATCTCTAATTATCAAATTGCTCAAATTATGTTATTTAGTTCAATTGATTTATATGTAGGAGTTTCATATATGCAACATTGCAATCATGAATTTATATTGAATATAGATGAGACGAAATTACCCTTAAGTATGGCTAAATATTTAGAACAGTTTGTTAAAGAAAATTAACTATAATTTTGCGCTAGAG # Right flank : ATTGGAGGATATTTATGAGTAGCATGAGGAAGCCGATTATAAAAAATATTAGTTATTCTAATGAAGAGCTAGTTAATTCATTAGGCGAGTGGCAACAGAGTGATGATTCCAAATTTTTACTCAGATATCCCACCGTCTATATTATAAATGATAAAAATAAGTCTGATCATTTTAATTTGTATGTTGGTGAAACAACGGATATCAAAAATAGAACAATTCAACATTTGAAAAATGATGTGAAGCTTAAAGACTATTGGAAATCATTTTACAGTTCTGATACGTCTTCGATGTATGTCATCGGACATCCGTTCTTTAATAAGTCTTTAACTTTAGATATAGAAAACAAGTTTATGCAATATTTGTCTAGTGTAGATGCTGTGACTTCAATATTTAATAGTAGAACAAATCAGCAAAATGAATATTATACTTCTGAAAAATTAGATGAAATATTCACAAATATTTGGCAACAATTACATAAAGAGAATAGTAAACTTTTTCCT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATGAGTGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTAGTACTCTGTAATTTTAGGTATGAGGTA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //