Array 1 15124-10598 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJVG01000035.1 Lapidilactobacillus concavus strain NBRC 106101 sequence035, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 15123 36 83.3 30 ..C...G..T.G.........G....G......... AGGGCAAAACAGTCAAAACTATTGAAGGGC 15057 36 100.0 30 .................................... ATACCCAGGTTTCAGATTACGTTGGCACGA 14991 36 100.0 30 .................................... CCACGCGTAAGCATAAATCGGCAAGGCTGG 14925 36 100.0 30 .................................... TGGGTTTAAGCGCAAAACAGCAGAAAGTTG 14859 36 100.0 30 .................................... TGATAGTAAGGCAACTCAACCTATTGTTAT 14793 36 100.0 30 .................................... AGACGATTTGCTTAGCTGGTAAAAAACTTC 14727 36 100.0 30 .................................... AACACTATCGAGTGCTTGTAACGCACCGAA 14661 36 100.0 30 .................................... AAGACGCAACAGAATATAATTTAAACCTAT 14595 36 100.0 30 .................................... TAAATGTTATATTCCCCGTTATTAATTATT 14529 36 100.0 30 .................................... CAATTGAAGGTGTGGCGCGAAAGCTTAACA 14463 36 100.0 30 .................................... TGCACCATCGACAGCCCAATTTAAGATACC 14397 36 100.0 30 .................................... TGCCGCGGCAGGACCAAGCTTCAAAGCCGG 14331 36 100.0 30 .................................... GGAACAGTTGCGTTCCAGTCCACATTGTGG 14265 36 100.0 30 .................................... ACCAGATTGGTGAAATTAGCCAAAAAGAAG 14199 36 100.0 30 .................................... ATTAACCAAGACATTCTAAAGGCTAAACTA 14133 36 100.0 30 .................................... CACCGTCAAGCTCGATTTCGTTCACAGGCA 14067 36 100.0 30 .................................... CATCTTCCAATCCTTCAACCTCCTTAGTTA 14001 36 100.0 30 .................................... TCGTGGGATTAATTCACCGAATGCACTCGG 13935 36 100.0 30 .................................... TGTGCCTTTTGGCCTTTGTTGCCGATGTAC 13869 36 100.0 30 .................................... GGTATACTTAAAGAGTAGTAAAGAGTTAGA 13803 36 100.0 30 .................................... ACGTTGACGCGATTAGGCGCTCTGTTTCAG 13737 36 100.0 30 .................................... CTAACTTGGCGTCATCAACTACCTCCAACT 13671 36 100.0 30 .................................... ACAATACAATTCTAAACGAAAGTAATCTCA 13605 36 100.0 30 .................................... TTTGATTGGTATCGAGACTCAATACGTTGA 13539 36 100.0 30 .................................... GTACGTTGAGCGAGCCGCTTATGATGCCAG 13473 36 100.0 30 .................................... GACGTCAGTTGATTAATCAGCTTGAGACCA 13407 36 100.0 30 .................................... CACCAGCGACGTCCGCTTTCCAAAACAACT 13341 36 100.0 30 .................................... CATTGCAATATAAACCTCACTGCCTTTATA 13275 36 100.0 30 .................................... GGGACAATAACGACGACATTGAGTAAGGAT 13209 36 100.0 30 .................................... CTTGCGACTGGTAGTTATCACAGTTGGATC 13143 36 100.0 30 .................................... CGGCAGTACGCTCATGAGTGGTGTTGACCC 13077 36 100.0 30 .................................... TAACATATAGATAGCTGTCATTACTCTTGC 13011 36 100.0 30 .................................... CGGATTTGATCATATGTTGAAGTCATTCAA 12945 36 100.0 30 .................................... TGATGAAGATGATAAGACAGTCGTTGCAAT 12879 36 100.0 30 .................................... TTCATACTTGTCAAACTTTGCATTTCCTTG 12813 36 100.0 30 .................................... GATCGTCAAACGCTTTTGTGTCTTTATAGT 12747 36 100.0 30 .................................... TTGTATCTAAACTATAACACACTCACAAAA 12681 36 100.0 30 .................................... CCACATATGGGCGTGGATATGGTGCGTATT 12615 36 100.0 30 .................................... CTTTGAGTTTTCATACCACTGGGCCTAACG 12549 36 100.0 30 .................................... AAGTGGATCAATGCTTGCACTTTTCCATAG 12483 36 100.0 31 .................................... ATTAACCAAGATATTCTTAAAGCTAAATTAG 12416 36 100.0 30 .................................... TACAAGAGCCGGTTTCTAACCCTGGCGACA 12350 36 100.0 30 .................................... AAGCATTTCAGCTCACAACTATGACTTTTT 12284 36 100.0 30 .................................... AGGTGCATTGCTTACCCCAAAAGGGTTGAG 12218 36 100.0 30 .................................... GATGACTCACGGTAGACGTCCAGTGCATCA 12152 36 100.0 31 .................................... TTATAGCACAATCAATTGGAGATAGCCCTTT 12085 36 100.0 30 .................................... AATCACCAGTCTATAATGTTATTCCAGTTC 12019 36 100.0 30 .................................... TCAGTTCAAGGCAGTCGCCTTGTTTTAAAT 11953 36 100.0 30 .................................... AGGTGCCAAGTAAAACTGACTCGAATAAAC 11887 36 100.0 30 .................................... AGACGATGTCATCAGCACATATATGCCTGG 11821 36 100.0 30 .................................... TGTAGGGAAGTGGAAAAGTGCCACACGAAT 11755 36 100.0 30 .................................... TTAAGCAGATGATCGGAATGGGCGTTACGG 11689 36 97.2 30 ..........................A......... CTGGCACTGCTACCACTGTTCAGCAAGCCA 11623 36 100.0 30 .................................... AATGACAGAACACGTTACTTGACATACAAA 11557 36 100.0 30 .................................... TAAGCGGCTGGATATTCACGATGTCCGGTT 11491 36 100.0 30 .................................... CGAGTGGTAGTAAGGTGATTGCGTCATTCA 11425 36 100.0 30 .................................... TCATCACAGATGAAGCGCAACACGCGTTGG 11359 36 100.0 30 .................................... CAACGCTTCTAACTGGATACCATACGAAGC 11293 36 100.0 30 .................................... TTGGCTTCCAATTGATAAGCTTCAACGTCA 11227 36 100.0 30 .................................... CGCTTGATTTAAATTATTGAGAGTTGACTG 11161 36 100.0 30 .................................... AATCATACATAGTCGCCCACGAACTCGCCA 11095 36 100.0 30 .................................... TGCCTGTGTAGCTGGATCTTCTACATAGAA 11029 36 100.0 30 .................................... CAAAGAGTGGTGTATAACCGTGAATGTTAC 10963 36 100.0 30 .................................... ACGTCGTCATTTGGTAACGCCCCTTTCTAG 10897 36 100.0 30 .................................... GAGAGAGGTTACTAATCTCGTTAACACCAA 10831 36 100.0 30 .................................... CCGTTCTAGGAGGCTTTAAGGAGTTGACAG 10765 36 100.0 30 .................................... AGAACAACTGTTTGTCTTCAATGGTCACAC 10699 36 100.0 30 .................................... GGGAAATTTATTATGTATAGCGGAATGAAG 10633 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 69 36 99.7 30 GATCTTAACCTTATTGAAATGACACTCTTCTAAAAC # Left flank : AAAAGGAATCCCTTGATATAGAAGAATTCTCTTGACTAATGGTAGAAAAAAGCGGTCCAACTTTCGATTACGAAAGAAGGCCGCTATGCTGAAAAACTACACGAAGAGATGCACCGCGTCGAGGCTCAGAGCTATGAAAAATCTTTCACTTAATTTACACCAGCGGAGATTTCAACAGCGATTCATATTCTCTATAAACTTGCTGAATAAATGT # Right flank : CGTTGTTTTCTCATTATTGATTCATGATTACTCAGCGCGCCAATCAACAAAATCTTGATCGATATAATAATACTGGCAATTTGCAAAATAATCGTCACTTTTCAATTCTGAAAACTCGATTAATAAAGTGTACAGATCAAGTGTTTCAATTAATCTCACCAATTCTTGAAATTGGCTGACACTGAGATATTGATGCACGTTGGTTAAGACGAGTATGCCTCTTTCATCAAGATCAGAGGCACACTTTAATACTGTCTCTATTATATCATATGGTTGTGTTTTCAAGTCACTAACGAATGAAATAGTCGTGGTTTTTAACAGTTTACTAAGTGAAAATTCCGCATCAACTGTTAGCGGAAGATCATACGTTAAAAGTTCGTCCATGACCAGGCTCTTGAGCTGCTGATCAATCTGAATGAATTGACTCAGTCTTTCAGAGCCAACATTTTTGACAATTTTCTTTTCGATACCTGTTTGAAAGACTTTGCTGATTTCTGGGC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATCTTAACCTTATTGAAATGACACTCTTCTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : NA //