Array 1 2396181-2404250 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHBG010000001.1 Psychrobacter sp. H8-1 isolate Psychrobacter sp. H8-1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2396181 28 96.4 32 ....C....................... TAATTATTTAACTGATTGGCTAGGCTTAACAT 2396241 28 96.4 32 ....C....................... TTTGAAATATTCCAAATAGCAGAGCTAGCAAG 2396301 28 96.4 32 ....C....................... TGTGCTTGCATTATCGTAAAAATTACTATAAA 2396361 28 96.4 32 ....C....................... GATTTAAGGTACTGATAGCCCTTGAACGAACC 2396421 28 96.4 32 ....C....................... TGTCAACGGTGAGATAGCGGTTATTGATGCGC 2396481 28 96.4 32 ....C....................... GAAACTATCTTCACTTGATGACAAATCAGTTT 2396541 28 96.4 32 ....C....................... AATCTCAATACAACCCTCAAGGCGACTCTCGC 2396601 28 96.4 32 ....C....................... TTTGTTGGTGCTGCTTAATTGATTGCTTAATT 2396661 28 96.4 32 ....C....................... TGTAATCATATATTTAGCGTATTAATTGCATT 2396721 28 96.4 32 ....C....................... CAAACCTTACTAGGGACTGCTTACTCTATGCC 2396781 28 96.4 32 ....C....................... ATTTATTATGTTGACGTTATAAACCTCATAGC 2396841 28 96.4 32 ....C....................... TAGCTCAACATGGTCATAAGAGGCGTACAGAG 2396901 28 96.4 32 ....C....................... ACAAGGAGGTGCTGTCAAAAGCGCTAAGCTGT 2396961 28 96.4 32 ....C....................... ATTATTAGTGTTTTGCGAAATAAGGAAGTTGT 2397021 28 96.4 32 ....C....................... CACACACCTTGTTATTAATATCCAAGCCAGCA 2397081 28 96.4 32 ....C....................... ATTATTTAGCTTGCCTGTCATTTCTTTAACGA 2397141 28 96.4 32 ....C....................... TTAAGGTGGCGCGTGAATTTGATATGTATGAA 2397201 28 96.4 32 ....C....................... CTCTTTTAAAACCCTAAAACATTCAGGTAGCC 2397261 28 96.4 32 ....C....................... TTGATGGTGGTATCTCAAGTGTGTCAGGTTCA 2397321 28 96.4 32 ....C....................... ACCACACCCAGCCCCAGCCAGCAATGCCAATA 2397381 28 96.4 32 ....C....................... TTACCGAGCGAATGGTAGCCATGAAGTTGTTA 2397441 28 96.4 32 ....C....................... GCTGTAGACTGCCCAACCTCCTTAGTGATGGC 2397501 28 96.4 32 ....C....................... ACTGCATACTACACTTAACCTGCAAGGGTTGC 2397561 28 96.4 32 ....C....................... TGTATTAAGCGATTGACCGCCAATATTGTTAG 2397621 28 96.4 32 ....C....................... TGCGTATCAACGATTGAGCCGTAGTAGGCGAC 2397681 28 96.4 32 ....C....................... CACACAATGCAGTCGTCGCTGATGCCTGCCAC 2397741 28 96.4 32 ....C....................... AGCATACGATTATCGCCCACCCCAACCAATGC 2397801 28 96.4 32 ....C....................... AATGATGTAGCGCTACTTTCTTTTGATAGTTC 2397861 28 96.4 32 ....C....................... ACATACCGTTAATTGCTTATGTCTGTATTATA 2397921 28 96.4 32 ....C....................... TTAAGTATTCTAAAGGTATGGTTGCTGTATCC 2397981 28 96.4 32 ....C....................... GATATCGTGCGTATGAGCTTTTTGAACATCTC 2398041 28 96.4 32 ....C....................... TTAAGAATGCCATCATCAGTAGAGCGGTTATT 2398101 28 96.4 32 ....C....................... TGAGCCACTATTATTAACGGAGCAGCTATTGA 2398161 28 96.4 32 ....C....................... TTTAGTCCTTCTCTTTCAATTATTGCATTACT 2398221 28 96.4 32 ....C....................... GTTCTCCTTTGGCGTTACAGTTATGCCACCCT 2398281 28 96.4 32 ....C....................... TGAGATTAACCATGTTAGCCCTGTGACATTAG 2398341 28 96.4 32 ....C....................... AACGAGGTGTTCTTTGGGAACAGACCTCTACC 2398401 28 96.4 32 ....C....................... AATCTTTGGCGCACTAGGAGGCATGTTGACGC 2398461 28 96.4 32 ....C....................... TTTGCACTAATAATCGCAACTTACGCTCTTTA 2398521 28 96.4 32 ....C....................... AGTATTTTAAGTACAAGTGGCTCAAATCAATT 2398581 28 96.4 32 ....C....................... TATCTTTAGTGTGCAGGGTGATTTGGCATTGC 2398641 28 96.4 32 ....C....................... ATATATCAGAGCGCAAACTTCAATACGACGAT 2398701 28 96.4 32 ....C....................... TTTTGACTTGATAGATTTTAGCAAGTGTGACG 2398761 28 96.4 32 ....C....................... TTAACTATAGGTTTCTCATCAAAAGTGTCAGT 2398821 28 96.4 32 ....C....................... TGTACGTCTTAGACTCATACCGACTGCTTGCT 2398881 28 96.4 32 ....C....................... TACCCACAATGACGTTTTCGCGCCAGCCAGTG 2398941 28 96.4 32 ....C....................... ACAGGTTTATACATGGGCGATGTTGATGCTCG 2399001 28 96.4 32 ....C....................... AGACCATCGAAGAAAACGCACAACTTACTGCG 2399061 28 100.0 32 ............................ TAAATTAATAGATGGGCTTGGAGCATAAACCC 2399121 28 100.0 32 ............................ AACGCACACAAGCACCGTTGCTCATATCTGTT 2399181 28 100.0 32 ............................ TTACGCATAAATGCGATTATATGATTTAACAA 2399241 28 96.4 32 .........A.................. TCGACATTGTTATAGCTGCTTGATGTACGCTC 2399301 28 100.0 31 ............................ ATGAGATTTGCCTGGCGGTAGCATTGTCTGC 2399360 28 100.0 32 ............................ ACTTTTTGACCGAAGTTGCAGCAGACGGCTCA 2399420 28 100.0 32 ............................ TGCTGTTGGTGTTACATACAGAACCACATCAT 2399480 28 100.0 32 ............................ TGCTGTTGGTGTTACATACAGAACCACATCAT 2399540 28 100.0 32 ............................ AAGTGCATTGGTATCAACTGGATAGCCGTTTA 2399600 28 100.0 32 ............................ ATCTACTTCACCATCATAAAAACCATGCAACT 2399660 28 100.0 32 ............................ TTTCAGATAAACCGTGCAGTTCTTAGACTCAT 2399720 28 100.0 32 ............................ GCCGAGAGAATGGCTATGGTTTATGGGGTGGA 2399780 28 100.0 32 ............................ AACTGGAAAGAATCGCTAATCGAGCGCAAAGA 2399840 28 100.0 32 ............................ AATAACAGATAATCCCTTGATATAAGCAAAGA 2399900 28 100.0 32 ............................ GAAGGCCACTGGTTCGATTCCAGTCGGGCGCA 2399960 28 100.0 32 ............................ TCATTAGACCCTTTGTTGTATTCTGCATCATC 2400020 28 100.0 32 ............................ TCAATGCAGCGTTGTACTCTCTTATGAGTGCT 2400080 28 100.0 32 ............................ GGTTCGTTCAAGGGCTATCAGTACCTCAAATC 2400140 28 100.0 32 ............................ TCAATGATGAAGATAAGTACATTGATCATAAT 2400200 28 100.0 32 ............................ TTCAAAGAAATCATGGTTTTAATTATTTATAT 2400260 28 100.0 32 ............................ TATGGTGGATGTTCCAAAAGTAACAGAAGCAA 2400320 28 100.0 32 ............................ AGTAACTTCATTAGAGGTGTCAGTAACAGAAT 2400380 28 100.0 32 ............................ TGCTTGCCAATTAACAATGTCACCCTCATAAA 2400440 28 100.0 32 ............................ ATATCTCAAGGGCTACCTTCCTAACCTCAATA 2400500 28 100.0 32 ............................ ATAACTAAGTCATCAGCACGACTATAGCCATC 2400560 28 100.0 32 ............................ CTCACCGAACGGAACAACCTCGCCAAGTTTAA 2400620 28 100.0 32 ............................ ATTGATTAGGTTTACGATAGTCGTTTGGGTCA 2400680 28 100.0 32 ............................ TTCCTTTTGTGATTGGGCGTTCCCTGTTTGTG 2400740 28 100.0 32 ............................ TACACCATCATTACCACCAAAACCGCCAGAGT 2400800 28 100.0 32 ............................ TTACCCCGGAAGAGCTGTACATCCTCCTCAAG 2400860 28 100.0 32 ............................ ACAATCTTAGGATTGTGGTTTTTTATTGCAAC 2400920 28 100.0 32 ............................ TATTGATTAAGGGCAATAAAACATACTCTAAA 2400980 28 100.0 32 ............................ TAATAAGCGCAAATTTACTATTTCAGATAGGG 2401040 28 100.0 32 ............................ TGATAATAAGGACGTAAATAATAACAGCAATG 2401100 28 100.0 32 ............................ TAGTGTTTGTGGCGTCGGCTTTATGGGCGTAG 2401160 28 100.0 32 ............................ TAGATTGCGATAACCTCTGGAATGAACGCCAA 2401220 28 100.0 32 ............................ TGAGCCGACATCTTCGTAGTAGTACGTTAAGT 2401280 28 100.0 32 ............................ AAATCGTGACCGCAACAGGTGTCGCTTACATG 2401340 28 100.0 32 ............................ ATTGCGTAATAGCGTAACCATACCTTTACCGT 2401400 28 100.0 32 ............................ TTAACTTCGTAGGTCATGTATTTTTTCGGGTT 2401460 28 100.0 32 ............................ GTCTGCTGCTATTTCTGTCAAAAAGTGGACTG 2401520 28 100.0 33 ............................ TCGACTTCATCAACTGGTGTGCCACCTTGTTTT 2401581 28 100.0 32 ............................ TCTATGCCTAGCACACTTACTGCCTCGTACAA 2401641 28 100.0 32 ............................ AGTCTGAGGTGTCGTAACCCATACCTACTGAC 2401701 28 100.0 32 ............................ TTTATCAAGATATAACCATCTTTATTGCAGAT 2401761 28 100.0 32 ............................ TAAGTGTGGACAGTCGATGGGCGCTCATAATA 2401821 28 100.0 32 ............................ TCTTCCGCTTCACTTGCGCGACTCTACGCCCT 2401881 28 100.0 32 ............................ CTAGCTATTCTAAAAAAACTACCTATAAATGT 2401941 28 100.0 32 ............................ TTTTTGCCAGCTACCAGTACCGCTTTCGATTA 2402001 28 100.0 32 ............................ TATGCACATCCAACTGCATAGGTGTCAACAGC 2402061 28 100.0 32 ............................ AAACGATTAACGACACTGACCATGATTACAGC 2402121 28 100.0 32 ............................ TACACCATCATTACCACCAAAACCGCCAGAGT 2402181 28 100.0 32 ............................ CACCATACAAAATAGTCGCAGGTGGTTGCCGT 2402241 28 100.0 32 ............................ TGCATTGACGGCGCATGCCCATCATTTGCATG 2402301 28 100.0 32 ............................ TTAATGCGTGTATTTAGCGTGTCGTAATCAAC 2402361 28 100.0 32 ............................ AAAGTAGTAGCGACAGTAATGACCAGACTATC 2402421 28 100.0 32 ............................ TTAAAGATACTGGCAACTCAACGCAGATTGAA 2402481 28 100.0 32 ............................ TTGTGCTATGAGTGCAGCACTGGTCGTTATCA 2402541 28 100.0 32 ............................ TTATCAGCAACAGCGCACAGATATGAGAGCTA 2402601 28 100.0 32 ............................ AAGGAGCTTGACGCACACGCAAAGCAATACAG 2402661 28 100.0 32 ............................ TTTTTCATAGCCACGATAAAGCTTGCCGTTTT 2402721 28 100.0 32 ............................ ATGAGGAACCTAGCAAAGCAGAACAAAGCTGA 2402781 28 100.0 32 ............................ CTCGCTCATATCGCCCTCACTCTGCAGATACT 2402841 28 100.0 32 ............................ TGATAACCACTGCATACGGTTTTTAGATAACG 2402901 28 100.0 32 ............................ TCAACGGCTTTCAGTGGGTAATGCGCGCAGAT 2402961 28 100.0 32 ............................ GGCATTGGCAGCCACTCGAATATCAAAATCAA 2403021 28 100.0 32 ............................ GTTACGGTTTTTTGCCACGATAACTTCAACAA 2403081 28 100.0 32 ............................ TCGTCATTACCTGCTGCACTACCTGCGTTTAC 2403141 28 100.0 32 ............................ ATAAAAATGAGATACACGCCCTTGACTTAAGC 2403201 28 100.0 32 ............................ ACTATCACCGAACGCCTGACGCAATAGCTTTT 2403261 28 100.0 32 ............................ ATGACTTATCCGAATGATGCAATTACAAATCC 2403321 28 100.0 32 ............................ GCCCAGCAGAGCGCAGCCAGTGACCAGCAAAA 2403381 28 100.0 32 ............................ GTAGAGGTTTGGGCGATTGCATTAACCGACCT 2403441 28 100.0 32 ............................ ATTATATTGAGATAACACGCGCCGCTTTTGTG 2403501 28 100.0 32 ............................ CACGCACTAACACGCGCCACCATACAAGCGGG 2403561 28 100.0 32 ............................ ATTGAATGAAGTCAGCTTGCCGGTGTTGTCTG 2403621 28 100.0 32 ............................ TACCAAAAGGCAGGGCTTTATCTAGTTTTTGC 2403681 28 100.0 33 ............................ AACTACTTGCCCATAGACCTGCTCAAACGTTTT 2403742 28 100.0 32 ............................ TGTGAGTGCCCCATGTCCGTTTGTTTCATCTC 2403802 28 100.0 32 ............................ ATGATAAGCACATTCAGCATTAGCAGCATCAG 2403862 28 100.0 32 ............................ CATCAGAAGCGGATACCTTATCGAGCATTGAT 2403922 28 100.0 33 ............................ AAAATCACTGGTCATAAAAAACTAGAGACATTA 2403983 28 100.0 32 ............................ CGTATAAACTCCCATAAATTGTAGGGTATTCC 2404043 28 100.0 32 ............................ TTCCTCCGCTGCGAGTTGTGCATCGAGCATAT 2404103 28 100.0 32 ............................ TTACGCAAGTCTGCCTCAAAGTGGTCATTGTT 2404163 28 100.0 32 ............................ TACAGCCACTATTCTACTAACACATTGTATTA 2404223 28 96.4 0 .........................C.. | ========== ====== ====== ====== ============================ ================================= ================== 135 28 98.7 32 CTTCATCACCGCATAGGTGACTTAGAAA # Left flank : GCATGTGAAGCGCATCAATGAGGTTGGTGACAAAGCCAAAGGGCACGTTGTGATCAGACGCTACCGCCATAAAAACGTGCTCAAGCAGGCTGAAGCATTCGCTGAGCACAAAGGAATTACGCTGGAGGCGGCACTGATACACTGCGCCAAACACAAACAGGATAACAAACCGTATCCGTATATCAACTTAAGGAGTATCAGCAACAATCAACCCTACGCATTATCTATCATTCAAGAAATGACAGATAATGAGACTCAAGGGTCGTTTAACAGCTATGGCATTAACAATGCGGCAGATAAGGTTACTGTGCCCCATTGGTAAGCTACTTATAAGGTAATGACGAATTACCCAAAAATTGGGACAAAAAACCCTTTTTTTGAGCTATTTAAAAACTTGTAATAAAATCAATCAGTTACATTAGGGCGAAAAACGGAGGGTAAAATAGGGTGTTTTACTCTCCACGCCTTGTTGTAATTGAGTTTTTTGAGGTATAATTCCT # Right flank : ATGTCGCAAAAAGACTGACAAAGCGCTAAGATTTTTACATCGAAAAGAGTTAGTCAGCATAAAAAACCAGACAGCCTAGGCCATCTGGTTATCAAGTAACATCAAATATCTATCTACCAACAGTAAGCTGTCCCCCAGAAAAGCTGATGCATCCATCACAAAACCAAGATTTTTGTTGTCTTGCATGGGGGATATCTGCTGGCACATCGAGTTGATAAGGACGACCGCAATACTCGCAATGTATATCACCCAAATAAACCTGGCATTTTGCAAGCGTAGCAAACAACTCATCAGACCTTATATTGTAATCGTAGCAAAGTATCTTTAGATGAGCGATATAGTCATTGGGTGATACATACGACCAATACTGATGGCACAAACGCTTTGCTTCATCATCTAGGCTTGAGTCGAACACAAAATTTACACACATGATATTCTCCTCGTTAGTAGCCATATCCAGATGGTGGTAGTAGCTCGTAAAGCTCACTTTGTAGCTGACT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCATCACCGCATAGGTGACTTAGAAA # Alternate repeat : CTTCCTCACCGCATAGGTGACTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.70,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //