Array 1 170809-168866 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSLI01000001.1 Streptococcus lutetiensis strain AM25-7 AM25-7.Scaf1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 170808 36 100.0 30 .................................... TGAGTCACTTGCGGGCTCGTGCCCATGTCA 170742 36 100.0 30 .................................... ATGACGCCAATGATTTCTTCGCGCCGTTTA 170676 36 100.0 30 .................................... AGTGTCTGGCAATCGTGTGTTGTTAGCAGG 170610 36 100.0 30 .................................... ATTTGGGAAAGAACTTTAACAGTCCCAAAT 170544 36 100.0 30 .................................... AGTCCCCTGTAAAAGCTTGGGATTGGGCGG 170478 36 100.0 30 .................................... AAAACAATCATGGAACCAATCGAAGGAAGC 170412 36 100.0 29 .................................... TCTTTCAGTTATTGAACAATCGTCTACAG 170347 36 100.0 30 .................................... AAAGTCGTATGCATTAACCGAATCGACAAC 170281 36 100.0 29 .................................... GCTTACGCTGGTATGTTGTGGACGGTGCC 170216 36 100.0 30 .................................... ACACCTCCTTTACATTAAAATTTTCAGCTT 170150 36 100.0 30 .................................... GTGCTTTTCGCGAAAAATTCACATCAGGTG 170084 36 100.0 30 .................................... AAACATTCACGAATAACTTTGATGCTCTAA 170018 36 100.0 30 .................................... GTGTGCCCATCGACCTTACCACCCCACACA 169952 36 100.0 30 .................................... GTATTTTTAAAGTTGACGGCGAAAACTACG 169886 36 100.0 30 .................................... CAACTAATAAACTACTAACCACAATCACTG 169820 36 100.0 30 .................................... TTTTAAGTGCTGTGAAACCAGAAGTGTTAG 169754 36 100.0 29 .................................... TCAATGCTATCCTATATCTATCAAAGTCG 169689 36 100.0 30 .................................... ATTGTGCGCTTTCATGTAGACTAAAAGTAT 169623 36 100.0 28 .................................... TACTATACCAGTAATTGGTGCGCAAGTG 169559 36 100.0 30 .................................... CAATTTAGATGAATATACTGTGACGGAGGT 169493 36 100.0 30 .................................... CCGAATCGGCGATTATTGGGTTCGTCAAGA 169427 36 100.0 30 .................................... TTTAATCAGCGAATTAATTTCTGGGAAAGG 169361 36 97.2 29 A................................... CTATAATAGGCATGAAAGCAAGCAACAAT 169296 36 100.0 30 .................................... CAAGTACTATTAGTATCAAATCGCTGCACT 169230 36 100.0 30 .................................... TGTCTCTCGGAACTTGTGGTTTGTTTTCTG 169164 36 100.0 30 .................................... GCAACACAAGCGAAAAAGCCACAGCGCCAG 169098 36 100.0 30 .................................... AAAGGTGGTGATGTCAAGAATTTCTCTAAG 169032 36 100.0 30 .................................... GTTGAACGTTTAGACGCTCGCGGGCAGCAC 168966 36 100.0 31 .................................... GCAGATTCTTTGGCTTTTGCCCTTATTTTGT 168899 34 83.3 0 ......................CAAC...--..... | ========== ====== ====== ====== ==================================== =============================== ================== 30 36 99.3 30 GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Left flank : ATGGATGATTACCTTGATTATGCCTCATTTATAAGAATTTGTCAGGTTATCACAAGAATGGCTGATGAGTTTCCAAATTTTTATTGTACGATTTTTCCGTCAAACGAGAGCTACTTGTATGTGACTAAAGAAACAATAGAAAATATTACCATTGTTTCAGATTATATTGAATCTTTGTTTGATCTTGATTTTATGTATGAAAGGTTTGTTGGAAGATATCCATCCAACAATGTACCAACAAAAAAAGAATTTTTAATTCTTTTACAGAAGAATGCAAGTTATTTATTTAGTGAGCAAATTTCATATGTGAGTTTAGGAATTTCGGATATGGTAGCTATCAAGATACTAAATAGTTTATATCACTATGATAAGTCAGTTAAATATCCAATTTCAGAGATAAATCAGCTTGAAATAAGCTTTCTTAAGGATAAAGATTGACTTTTAGGCTCAATGAAATTATAATTCTTGTAGAGTATAAAGACCCAAAATGACGATTTGAG # Right flank : CCCACCTAGTTCGTCACTGGGTGGGGTAATCTATGTGGGTCATAGGTTTGCAGAATTGAGTTTTTATTACCTTTGATTAATAATAACGCTTTCTGCAAAAATTGTAAAATGATTTGCGGTAGCTGATTTTAGCGATATTTATCGTGCCTAGAAAACTTTTTATAGCACCAGTGGTGTTTATTTGTTATAATAGAAATAATGAATAATTGTATAGGATTATAGATAGATGGATATTCAAGAATTAAAAAAACGACAAGAAAAGATTCGCAATTTCTCAATTATTGCGCATATTGACCACGGAAAGTCAACTTTGGCTGACCGTATTTTGGAAAAAACTGAAACTGTCTCTAGTCGTGAAATGCAAGCTCAACTCTTGGATAGTATGGATTTGGAACGTGAACGTGGTATCACAATCAAATTGAATGCGATTGAGTTGAATTACACAGCTAAAGATGGTGAAACTTACATTTTCCACTTGATTGACACACCAGGGCACGTTG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //