Array 1 106755-109671 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042240.1 Salarchaeum sp. JOR-1 plasmid pJOR178, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 106755 30 100.0 35 .............................. GGTAGCACGGCGACGGTCTCGCCCGTCGGCACCCC 106820 30 100.0 36 .............................. CGGTTGTGGTGTGTCACGCATCGGGCCGTCGCTGGC 106886 30 100.0 35 .............................. GGGCCGATGACCGGCCTCGCACGCACCCGCGCCCG 106951 30 100.0 36 .............................. CGTCGTTGTCTCCGTGCCGATGTCGGTACCGAGGCC 107017 30 100.0 35 .............................. ATATTGATATGGCGCGTGGGCGTGGGTCGTGGACG 107082 30 100.0 36 .............................. CTCGTCATCCCACAGAACCTGAGTCTCCTCCGCGAC 107148 30 100.0 35 .............................. CACCGTCCGAATCCCCGGATCAATCGTACTCCCCC 107213 30 100.0 35 .............................. CACCGTCCGAATCCCCGGATCAATCGTACTCCCCC 107278 30 100.0 37 .............................. GAGCTAAACGAACTTGAAGAGTCAGAGGTGAAGAACA 107345 30 100.0 39 .............................. GTTGACTGCGGTGGCTACGTCGACACTCGGAGGGACGGC 107414 30 100.0 36 .............................. CGTGATTTTAACGTCGGAGCGCGTGAATCCCTCGCC 107480 30 100.0 37 .............................. GGCTTAGCTTCACCCCCACCGTCGTCGGGCTGTGGTT 107547 30 100.0 36 .............................. AGCCGCGTCGGCAGATCCCCTTCAGGAGCGTCAAGC 107613 30 100.0 38 .............................. TGGTTGATTGCCAGCATCACGAAGCCCTACGTAAAGCA 107681 30 100.0 33 .............................. GCCGCTCCAGTCCGATTCGTAACGGGGGCGGTA 107744 30 100.0 37 .............................. TTCAGACGGCCGAGCACGCCGCCCGAGCGGCCGCCGA 107811 30 100.0 36 .............................. CATTAGACGCATACACCGGATAATGGGAATAGCGAG 107877 30 100.0 34 .............................. CCGCTGTAGTGGGCGTAGACGCTGTTCGGGACGC 107941 30 100.0 36 .............................. AATCTTGACCCTCGAGTATCGGAGAACGTGCAGGGC 108007 30 100.0 35 .............................. CCGAGTCGAAGAAGTCGGGCGAGGATGCGTGGTGG 108072 30 100.0 36 .............................. ATCCCTGAGGTGCGGACGATTGATGAGATTAATCTT 108138 30 100.0 34 .............................. GGTCTCTCCCAACGCAGTCGGGTTGATATCTGGT 108202 30 100.0 37 .............................. GCGTGGGATGGATGGGGTGTATGGGGTGCTTGCAGCA 108269 30 100.0 37 .............................. GATGAGTGCGAGGCCGCGTTGCGTGCTGATGTCGCCG 108336 30 100.0 35 .............................. TCGCTGGCATGGAGACGGCGGAAAGTCAGCTTGAC 108401 30 100.0 35 .............................. GACAAGATGGATGACGACGACCGGAGCATGCTCTT 108466 30 100.0 35 .............................. ACCACGTGGGCAAGAACTAAGGTAATTGGCCACAT 108531 30 100.0 36 .............................. TCTCCGTCCCTGTCCGGCGCTCCGAGCAGGAGATCC 108597 30 100.0 35 .............................. CCACAGGGCACTGGCCCACACATCGACACCTCTTC 108662 30 100.0 36 .............................. TCGGAGGAAGCGGCCCGCGACCGCATCAACGAACTC 108728 30 100.0 36 .............................. GAGTCGTTCGCCGTGATTTGGGAGGGAACGCTCGTC 108794 30 100.0 37 .............................. GGCGATCCAGCCGATGGGCTGCGCCCAGTACCACGGC 108861 30 100.0 36 .............................. CGGCGTAATCGTAGATGGTAGTTCCGGAGCCGTAAT 108927 30 100.0 34 .............................. GTTTGTGCGGCAGCGCGCGACAGCTGGCGCTGCA 108991 30 100.0 36 .............................. ACCCCCGAGGCGGACCGCGTGGGCCGCATCACCCTC 109057 30 100.0 35 .............................. ACCGGGCCGTCATCCTCGCCGTTCGTGAACGACGG 109122 30 100.0 36 .............................. GCATCCACACCTTCAGGAGTATCACAACGACGACTA 109188 30 100.0 36 .............................. CCGTTCTCCGGCCCGCTCCTGAATAAGCGACTGCCG 109254 30 100.0 37 .............................. ACCACCACCGCCAGTCCCAAACGTCGTATGCTGGCTC 109321 30 100.0 33 .............................. ACGACGACCACGTCGTACTCGTCGATGTCCGCG 109384 30 100.0 33 .............................. GGCCTCTAACATCCATGAGCAAGACACTTGGAG 109447 30 100.0 35 .............................. CGACGTTGCGGGCGTGGATTGCGTATGCGCGTGAG 109512 30 100.0 35 .............................. CGACGTTGCGGGCGTGGATTGCGTATGCGCGTGAG 109577 30 100.0 35 .............................. CGACGTTGCGGGCGTGGATTGCGTATGCGCGTGAG 109642 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 45 30 100.0 36 GTTTCAGACGTACCCTCGTGGGGTTGAAGC # Left flank : CACTCGAGCGAACAGTCGAGCACCCGACGCTGAACCGGAAGGTGAGCTATCAGTATCTGCTTCGCTTGGAGGCATACAAGCTCAAAAAGCACTTGTTAACCGGCGAATCCTATGATTCGTTCAAGCGGTGGTGGTAGATGTACGTCATCGTCGTCTACGATATGGAGGCTGACAGAACCCACCTGATGCTGAAGCTCTGTCGCCGGTATCTTGTCCACGTCCAGAACTCAGTGCTGGAGGGAGAAATCTCGGAGGGAGATCTAGCGACACTGAAGGGGGAGATCGAAGACCTCCTCCAGGAGGGAGAATCAGTCATGGTCTACGAACTCTCTTCGAACCGGCTGTTGAACCGTACCGTGTACGGGGACGACCCGACCGAAGATAGTCGGTTCCTCTAGCTGATGTCGACCCCCCCCGGGGGTTTGGGGAGATTGCGGGTCGACGGAAATGATGAAGTGTATACCACTGGTAGAGGTGATATGGTGGGCAAAATCACCATG # Right flank : CGCCATCAATTGGCTCTGTTGGAACCCCCAGCAGATGATAGAAATTACCTGCTGAATACAGCGAAGTGTACAGCAGAGCGTTATGCTACGTAGCGGCTACTCCGTTAGGCAAGAAGCAAGGAGCTGATTGAAGCGCCTGCCGCGTCTGTCCAGACAAACCTTGTTCTTTTAGACGGCACCAAGTAACTCCAATATATGCCCTCAAGACGGACGTTTCTTCTTGGTGGTGGTGGTCTCGCGGCGATTGGTGGGCTCAGTTGGCTTGGGGTCGAACACGTATCTGTAACCGGGGAGGTCAAGCGGAAGTATATCGATGTTTCGTGGAGATCTAACGGACGACAGCGACACGGGCGCATTTTGTGGTCAGCGGTAGCACCAGAAGACGAGATCAACATCTCGTATGCAGCCTCCTACGCTGCGGACGCAGTTCAGGCTCCGAGAGAGATCACCGTGGGTCGAGATTTGGCTAGCCGTCTGAACGAAGACTTCAATGACGTCAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGTACCCTCGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.00,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //