Array 1 2489945-2491034 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_SEZY01000001.1 Staphylococcus pseudintermedius strain 50_21 Scaffold_1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   2489945	    36	  97.2	    30	............................A.......	TCTAATTCTGTTTTAGGTTCACTTTGTATC	
   2490011	    36	  97.2	    30	............................A.......	CGGTAATTAGAATATTGGAGGGCGAGTGAA	
   2490077	    36	  97.2	    30	............................A.......	CAATTATCATCATCGTTTTTCATGGCGTGA	
   2490143	    36	 100.0	    30	....................................	ATTAAAGTGGCGTCAGTAGAAAGTGTAACA	
   2490209	    36	 100.0	    30	....................................	ATAATTTATTTAATGCTACTGCGTTAGATT	
   2490275	    36	 100.0	    30	....................................	ATAATTTATTTAATGCTACTGCGTTAGATT	
   2490341	    36	 100.0	    30	....................................	AATATAACATGTCGATTAAGACGTCTTTCG	
   2490407	    36	 100.0	    30	....................................	TGATGTACGACAGGAATATATTAGGGTTGT	
   2490473	    36	 100.0	    29	....................................	TATCGCGTGTTGGAATACATGCAACGATA 	
   2490538	    36	 100.0	    29	....................................	GAATTTTGCAGTCCTAGTAAGCGATAGCG 	
   2490603	    36	 100.0	    30	....................................	TGAGCCTTTATCATTTAGAACAGCTAGAGT	
   2490669	    36	  97.2	    29	............................A.......	GGACAACAACAAGATATTGCTCAAGCCTA 	
   2490734	    36	  97.2	    30	............................A.......	TTTCCTTCGTGATTTCTTCTTCTACTTCGA	
   2490800	    36	  97.2	    30	............................A.......	AATGCACGTGCTGTTATGGTGAAAGGCTAT	
   2490866	    36	  94.4	    30	...........T................A.......	CGAAAGTAAAGATAGTATGCAAGGTGCAAG	
   2490932	    36	  97.2	    30	............................A.......	GTTATGATGTTTGGCGATATGGGTCGTCGT	
   2490998	    35	  83.3	     0	T........T................-.CA.C....	|                             	TC [2491030]
==========	======	======	======	====================================	==============================	==================
        17	    36	  97.5	    30	GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC	                              	       

# Left flank :   TTTTAATTATATTATTTCCGGAATCACATCTTGGCATACACGATATTAAAAAGTTTATACACCTTATAAAGAGATATAAATTTACCACGATTATTTTCACTAATCATCCTTCTATCATTATTAACGAGGAAAACATATTTCTTTGTAAAAGTAATAAGAAGTGCCACGACATCGAAAAAATATATGAAGAATTAATGTTATTTGTTCCTGAAGAAGTAGTGAGTCATCAATTAGTTAACATGATTGCATATCACGAATTCGTTGGTGAAAACCTTTCCGAGTATGAGCGATATTTTAAGTTTATCAATCATTACAATTAGGCTATACTATATTTAACATTATATGATAGAGAAAAGTTGATCCAACGATGAAGTAATGACTATGTGACTTCATTCGTGATGAAGAGGGTTAACTTTATCATCGAGTATCATATCTGACTTCTTTTAATAGTGCTAAGCCTCAATTTTGAAAAGGATTGAGTTAATGTTTTTGGATTTGAG
# Right flank :  CCTTCTTTATAATCGTACATCAACCTCACTATGCTTTCAAAATAATTAAGAGGCATTGTGGGCTTTTTGTGTTTATACGAAATGTTGTATGAATCTCTCAATCGTGCCACCATGTTATAATAGGTATAAATTGTTCATAAAAGATAAATAGAAAGCAGGGGAAATCTATGGAAGCAATTATTGCAACTCAACCGTTCCAATTAGCAGAAGGTCAAAAGTTTGAAAAAGTATCGCGTGAGCTCCCAACACCAGAGGCACATGATATTTTAATCAAAGTGTACGCAACAGGGATCAATCCGGTTGATACGAAAATGCGGCAAGCCCCGTTAAATGCTGAGGCACGTGTCCTAGGTTTTGATGCGGCAGGTGTGGTTGAAGCGGTCGGCGATGCGGTTACGGATTTCAAACCGGGTGACCGAGTATATTATTCAGGATCGAATCAACGAGATGGCTCAAATCAGACGTATCAGCTCGTGAATGAAAATTATTTAGCGCATATG

# Questionable array : NO	 Score: 5.89
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.75,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC
# Alternate repeat :   GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.20,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-11] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
//