Array 1 54654-58637 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATHV01000015.1 Desulfovibrio sp. X2 ctg23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 54654 32 100.0 33 ................................ CCGGTCAGCAGGACCGAGCCCGCGGCCGCCGTG 54719 32 100.0 38 ................................ CTTGCGTCAGGTCCGCCGCGTCCAGGCCCAGGCCAGCG 54789 32 100.0 33 ................................ ATGCCCGCATCGCGCGCGCTGGCGCGCACGGAG 54854 32 100.0 33 ................................ ATCGGAGGGTGGTTCACCTGGTGGCAGATCTCG 54919 32 100.0 32 ................................ ATAGAACCCCACGGTGAAAAGACCGGGGTTGT 54983 32 100.0 33 ................................ AACCTGACTCATGGCGGGAGACTCGAGCCCGGG 55048 32 100.0 35 ................................ GCATTCCACGGCGGGCGGGCAGCAGTTCACGCGGG 55115 32 100.0 33 ................................ GGAATAAAGCCATGCCTCTCCCGCGGCAAACGC 55180 32 100.0 34 ................................ GAGATCGGCGGCGAGCCCTACGTCATCGCGGACA 55246 32 100.0 34 ................................ AACGAGGACTCCACCAACGAAATGCGTCGGCGCA 55312 32 100.0 36 ................................ AGCATCTTGCCAGTGGCCGTTAATCGGGCCGGAACA 55380 32 100.0 35 ................................ ATCCGTGAGGGGCTTTCCCGAGGCGATGGACAGGG 55447 32 100.0 35 ................................ GCCGTCCTCAGTGATACGGAAGCGGATTTCCGGGA 55514 32 100.0 35 ................................ TTATCGATTTTGAGATAAAACTCGAGAGGCGCGGC 55581 32 100.0 35 ................................ ACCTTCCTTCTTAAAGGTTACAACCCCAGCTGGCC 55648 32 100.0 33 ................................ CAGTTCCACGAAAACGGCCACGCGCGCCGCCGT 55713 32 100.0 34 ................................ GCATGGAGCAGCATCCTCGAGCGTTGGCGACCGG 55779 32 100.0 36 ................................ ACGGTCGGCCTGCAGGTGGCCACCCTGGCGGCCGGA 55847 32 100.0 34 ................................ ATCACCACGGCCGCGCACACCTGGGCGCGCACGG 55913 32 100.0 32 ................................ CAGGCGAACACGGCCTTGAGGCCGTTCCAGAT 55977 32 100.0 36 ................................ ATCGTCCAGCCAAAGGCATGTCCCGTCCTCGCGCCT 56045 32 100.0 34 ................................ ACGGATGGTCGCCCCGGAGACGTACTCGCGCTTG 56111 32 100.0 33 ................................ ATAAATTGCGGCTCGGTTGTACTCTGGCCGCAA 56176 32 100.0 34 ................................ CTCCTGCCCCGGTGCGGGTGCGCTATGCCGAGGT 56242 32 100.0 34 ................................ ACGAGAAGAGCCCCTGCCGGACAACCTTGATGCC 56308 32 100.0 33 ................................ CTGCACGATCACGTTGCGTGCGGCCCACTCCGA 56373 32 100.0 34 ................................ TCTATGATCCTGGTCGGCCATTTCGTGCCTGTAG 56439 32 100.0 34 ................................ GTCAGCGGCCCGGGCCGCGCGCAGGATGGACGAC 56505 32 100.0 35 ................................ CAGGCTCATGAGCCCGTAGTCCGAAGTGACCGCGG 56572 32 100.0 36 ................................ GGCGTCCTTGATCGGGCTGTTGTCGTGGCCGTGGAG 56640 32 100.0 33 ................................ AACCTCCTGCACGGCAATCCGCGGCTGGTGGTG 56705 32 100.0 34 ................................ AGGTCCAGGGAGCCGCCGACGCTCAGCCCCTCGG 56771 32 100.0 36 ................................ TTCCATGACGGCCACGCCCCTGTCCGTGTCCCAGTC 56839 32 100.0 33 ................................ GATAATCTTGAACAGCCAAGCCAGCTTGCCCGA 56904 32 100.0 34 ................................ AAGTCCTCGCTGCGCTCCATCAGCGCGGCCCTGC 56970 32 100.0 33 ................................ CTGCCTGGGAGCGCAGAGTACTGCCTGATCCTC 57035 32 100.0 32 ................................ ATCCCGGTCGCCGGTCAGCAGCTTGCGCAGGC 57099 32 100.0 34 ................................ ACGCGGTAGGCGTCGGCCCGCTTGGAGAGCGCAG 57165 32 100.0 34 ................................ GTAGATGCGTTCCCAGGCCCGGGCCGCGGCCCTG 57231 32 100.0 33 ................................ TCTTGGCCTCGTGGCCCTGGGCCGTTGGCTGCA 57296 32 100.0 34 ................................ AGGTCCATGCCGTGGCTCTCCGGCCACTCCCCGT 57362 32 100.0 35 ................................ GTCCAGGCCGTGCTTGATGGAGTAGAGCTTGATCA 57429 32 100.0 35 ................................ AGAGGTGACCATGCCGAAGCTGCGCACGGCGTGGG 57496 32 100.0 34 ................................ AATGTCCGCCTGATCCAGGCGGACGAGGCCGGGA 57562 32 100.0 33 ................................ ATGGGCAGGGGCTCGTCCTGCACCACCGTGATC 57627 32 100.0 35 ................................ GTGAACCGGCTGCGCGCGCTGCGCAGGCCGAAGGG 57694 32 100.0 34 ................................ GGGATGAGCAGGCCGCGCTTGATGCAGAGGGAGC 57760 32 96.9 33 .......G........................ AACGCCTGCGAAGGCGTGCTCGCGGAGGGTGTG 57825 32 100.0 34 ................................ GAATTCAGGCCGGGTGGTTTTCTGATCAACGGCT 57891 32 100.0 33 ................................ AGGAAGTCGGAGTCGATCTCGTACTCGGTCCAG 57956 32 100.0 34 ................................ ATCATGACCGCCGCCATGCTGGCCGTGGGCCTGG 58022 32 100.0 32 ................................ AAAAGGTACAGGAACTCCGTGAAGCCCTTGTG 58086 32 100.0 33 ................................ TACCGCAGACAGGTCGGACAGTCTGCCTGGACG 58151 32 100.0 34 ................................ CAGACCATCAAGTGGGACGATCCAGCCCCGTGCA 58217 32 96.9 33 ...A............................ CCGTCTCTCCGCTTGCATGGCCCCCGCCAGGGC 58282 32 100.0 32 ................................ AGCTTGTGCCAGACGCTCGAACTCCGATCGGC 58346 32 100.0 33 ................................ ATTGCTTCGAGCCCATGCAGGCCGAGCATGGCT 58411 32 100.0 33 ................................ AGATAGGCGTCGAGGACATAGTCCTTGAGGGTG 58476 32 100.0 33 ................................ TTCTGGAACTCGGCGTCGATGCCGAAATCAGGC 58541 32 100.0 33 ................................ TCCATGAGCGAATCGGACTTTGCCTCGCTCACC 58606 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 61 32 99.9 34 GTCGCCCCTCGCACAGGGGCGTGGATTGAAAC # Left flank : TATCCGCCCTACCTTTGGAGGTGACCATGCTCGTGCTCGTCAGCTACGACGTCTCCACCATCGATCCCAAGGGACCGGGCCGCCTGCGGCGCATGGCCAAGATATGTCAGAACTGGGGGCAGCGCGTGCAGAATTCCGTCTTCGAGTGCCTTGTGGACCCGGCGCAGTGGACGGCCCTGCGCGCCAAGCTTCTCGATTGCATGGACCCGGAGCACGACAGTCTGCGCTTTTACTTCCTCGGCGCAAATTGGCAGCGTCGCGTGGAACATGCCGGGGCCAGGAAACCGATTGACCAGGAGGGGAATCTCATCGTCTGAAGCGCTGCGCGGACCCCAAGCGGACACGAAAATCCCGGGAGGTTCGCGCGGGGAAAAATTGATGGAGAATCGGATTGTTAGGCGAACGGGTCCGCTCGTGGAGGCGCTCAACGCTTCCGCTCGGGCGTCGCTCGCGCACCTGCCCCCGGCAAGCCGCACGGATCATGGCTTGCCGGAGCGGGA # Right flank : CCTCACCGAGAAGCATTTCAAGGCCCACGGCACCACGTCGTCCCCGCTCTGGAACACGGAGAGACACTTGCGCCGCTTCTGCCAGGACGCCCCGTCCTACCCGTCCCAGGCCAGGTCGTAGCTCGTCGTGCGCCCGCCGCCTTCGCGGCGGGTCAGCACGCCTTTGTGCAGGAGGTCCTCGATCTCCCTGAAGGCAGTGGCGCGGCTCGCGCCGGTCATGGTCACGTACTTGCGGTTCGAGAGGCCGCCCGTAAAGCCGCCCGGTCCGGCCTCGGCCAGTTTGGTGACGACCTTGCGCTGGCGCTCGCTCAGCGGAGTTCGGCCGTGGGCCTGCCAGAACCTGGCCCGGGCGAAGACCGCGTCCAGTATCTGTCCCGAGCGGGCCAGGGATTTCAGGTGGCAGTCGATGAACCAGCAGAGCCATTCGGTGACGTCGCCATCGCCCTTCTGGGTGCGTTCCAGGACCTCGTAGTACTCTTGGCGGGTGCGCATGATCTGCG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTCGCACAGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCTCGCGCAGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.70,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.15,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //