Array 1 8143-7446 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJLX01000089.1 Micrococcus sp. RIT608 89, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================= ================== 8142 36 100.0 35 .................................... TGCAGCGCCGGGTCCACGCACTGCGCCCCATACGC 8071 36 100.0 35 .................................... GTGTGAGCGCCGCGCGTGCCCCACCGATCCGCGAC 8000 36 100.0 38 .................................... CCGGAGCCGCCTGTGGGTGTGCTCACGGCGGAGTGGCT 7926 36 100.0 36 .................................... GCCAAACCCGTGGTGTGCCCCGCCGTCGAGCCGCTT 7854 36 100.0 36 .................................... CCGCGTGGAGCCGTCGTCGCCCACCGTGGGCGCGTG 7782 36 100.0 37 .................................... TGGCGGGACTACCAGGGCGTCTGGCATCTCGGCCCCC 7709 36 100.0 37 .................................... AACCCCCACGCCGACCCGTGGTCCCCCCACTACGACG 7636 36 100.0 36 .................................... GTGTCCGTCCTCCGCTTCCACATCGACTCCGGGAAG 7564 36 100.0 49 .................................... GGCGACGGCATGGGTGGCAAGGGGTCCAACGGCGTCAGTCTCAGCTCGG 7479 34 88.9 0 .............-.................-..CG | ========== ====== ====== ====== ==================================== ================================================= ================== 10 36 98.9 38 GTCTCCGCTCCTTTGGGGAGCGGACTTCGTTGAGGC # Left flank : CCCATCATCATCTGAAGCGACCCAGGGACCTTCGCGAGGGCTCCGTCGATGTCCGGAATCCGGCGAGCCGTCGCATCAGAAAAGGGCTTGTCAGCCCACGGTTTATGGGCCGAGGCCGATAAGCAGGGCGCTTCACGGATGCCTCTTGAGCCCAGGGCTCGCCGAAGGTCGCGTCTGCCCATGTCAAAGGGCTGTAATCTGAGGTGC # Right flank : CTCTAGGTCTGAGGCGGGGTAGGACTCAGGCCGCCTGCCTGCCCTGGTCAATTCGCTAGAGCGCGTCGAGGGGCGAGGCGCCTCGGCGGGGTCGACTCGCGGACATGACGTCCCCGAGCGTGGTGACGCGTTCTCGAGGCCTTGGATGTGGCTCCACGGAGTGGGCATCAGCAGCAAATCTGCTGTCTCGAGGCCAAGGCTGTGTGCGAGTCGGGGGACTGCCACGCCCTGGGCCAATGCTCGGCGCATGGCGTTACGTGCTGTCCCGCGTTGAAGTTCATCGGGCATCTCCACTGCCCGCATGCGCGACCGGCGCGCAGCCAGCTGCAACAAATTTTCGGCGACGGGCGCGGTCTATATCAACGGGGCCGTCTAACCCTCGGGAAGCAGTCGGTCCCGTCTCGCCCCTCACACCACCAGGGACAGGAACGCGCCGAGCGCGAAGCCGACCACGGTGAGCAGCCCGGCCTTCTCCCCGCCCTTCTCGCGGGCCTCGGGGA # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCTCCTTTGGGGAGCGGACTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 3225-2891 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJLX01000056.1 Micrococcus sp. RIT608 56, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3224 29 100.0 32 ............................. ACCCGCTCACACCCCAGCGCCTCGAGCTCCTG 3163 29 100.0 32 ............................. CACCCCCCGTCAAGGCCCCCTTGCTGACCACA 3102 29 100.0 32 ............................. TACGGGTGGGATCAGGTGCGTGACACCCCGCC 3041 29 100.0 32 ............................. ACCACCGTGTAGTGATGCACGTCGCGGGAGGG 2980 29 100.0 32 ............................. ACGGGCACGTCGTCAAAGTCGGTGAGCCCGTC 2919 29 86.2 0 ......T....C.G..............A | ========== ====== ====== ====== ============================= ================================ ================== 6 29 97.7 32 GGAAGCCCCGCGCACGCAGGGATGAGCCC # Left flank : GGCCGCCAAGTCCGGGTTGAACCGGGCGATCCTGGATGCCGGGCTGGGGATGCTGCGCCGGCAGCTGGACTACAAGACCTCCTGGGCAGGGTCCCAGGTGAAGATGATCGACCGATTCGCGCCCTCCTCGAAGGCGTGCTCGCGCTGCGGGACAGTCAAATCCACGCTGTCCCTGGCCGAGCGAACCTTCGAGTGCGAGGCCTGCCACCTGGTGATCGACCGCGACGTGAACGCCGCGATCAACATCCGGGCGTGGGCTGTGCAGGAGGAGCGTGGAGCAGGGGTCGAGCTCGCCCGAGGCCGTCGGGAGAGTCGAAACGGACGTGGAGCTGCTGTCTCGGGCCCGCCATCTGGCGGGGCCGCGGGGCAGGGGCGTGGAAGCGTCAAGCCCGCACCCCAGGGTGTGGGCATGTCCAGCCGGGCAACTGGCTGGTCATCCCAACCCCCCTCAACCGAAGGGGAAAGCGCAGTGCGCGGAGCATCCGCCCTGGCCAGGTAGT # Right flank : GACTCCCAGGGGCATTCACGGCTCCTGGGTTGAGCTGTCGTAGGGATCTGGGCTGGTCCCCGGTCCTTCCTAGACGCCAGCCAGTGCTCGTGACAGCTGCGGGTGTCGTGGAGGCGCTGCGGGGACGTGTCGCGGTGTCCGCGGGATGCTCAGCTGGAGGGCTCGGGGACGGTGGCCTCGCACTGGACCATGGGCATGCCCTTGGGGTCGCCGGTCTGGGCGTCCAGGGGGGCGGTGGTGCCGTCGGCGATGATCTCGCAGTGCAGGTCGCCGGCGGCAGGCAGCTGCGGGACGTTGGCGATCACCTGGATCTTTTCACCGGGCTTGGCCTGGGTGCGCAGGGTCAGGGGGGTGGTGCCGGCGGGCTCGGCGGGGATGGTCTCTTTGGTGTGGGTGTCCGCGCCGGTGCCGCCCACGAAGAGGTTCACGCCGCCGCGGGCTGCCGTGGTGGTGGTGCCGTCGCGGGGGATCCACTGGATGCGGATCTGCACGTCCACGGG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAAGCCCCGCGCACGCAGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.90,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //