Array 1 240168-242302 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYOB01000001.1 Photobacterium sp. GB-1 CFSAN065446_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 240168 28 100.0 32 ............................ GATATTTACATAACCCGTAGGAGCAATGTTAA 240228 28 100.0 32 ............................ ATTTGATTTAGTTGAATTAGCAGTGATATTAA 240288 28 100.0 32 ............................ TACGAACAACGCCGCATTAGGTACACCGTCAA 240348 28 100.0 32 ............................ TTATAGATCTTGTTACCAGATGCACGCCATTC 240408 28 100.0 32 ............................ TGATGATTTGGAGCAATCAGGAAAATTTAGTA 240468 28 100.0 32 ............................ AGGTACGAGCGCCACGCCAAAATAATAAACTC 240528 28 100.0 32 ............................ AGTTGCATGCCCGGTTGCTTGCTTATTCACGA 240588 28 100.0 32 ............................ TGATGGCGTCATTATCCAATCAGCAACAGGCC 240648 28 100.0 32 ............................ TTTCCAGCATCGACAAACGCCTGAGTTAGCCT 240708 28 100.0 32 ............................ TGACAAAAAAACAGTAGAAAGAGCGACAATAC 240768 28 100.0 32 ............................ ACTGAAATGTTTGATAAAGGTCGCTTAAGTAA 240828 28 100.0 32 ............................ AGGCATCAAGAGTACCAATGTTTTCATTTAAT 240888 28 100.0 32 ............................ TAATATGATGTTGATGATCATTGCATCTATTA 240948 28 100.0 32 ............................ TACCGCAAAAGACAATAACTGGTCAAAAACAA 241008 28 100.0 32 ............................ TTAATTGCGCCACCGTCAGTAATCCTAATGTT 241068 28 100.0 32 ............................ ACCTTGCAAATTTACTCTGACTCAACTATCAA 241128 28 100.0 32 ............................ GACTTGATAAACATATAATACCTTAAGACATA 241188 28 100.0 32 ............................ TGAATTTGAAAGATTAGTTTTTGATCGTGATG 241248 28 100.0 32 ............................ CGCTGAACTCATGGCCTGCACCGTTCTGGCTA 241308 28 100.0 32 ............................ CATTCGCCAATCGTGCGATTAGTCCAGCCATG 241368 28 100.0 32 ............................ AAACAAAACCCAGATGGTTTTGAGAAAATTGC 241428 28 100.0 32 ............................ TGACAAATCGACAACGGGCAAAGATTGCGGAA 241488 28 100.0 32 ............................ TGTTGTGACTCCCTTTGATTGAGTTACGCTGT 241548 28 100.0 32 ............................ GAAGAGCGACCAATCAAGGGACTTGCGTTAGA 241608 28 100.0 32 ............................ ACGCAACCATTACCACCATTTACAGCATCAGC 241668 28 100.0 32 ............................ TTCTGGCATAAGTAATTTTTTGTTGTAGTAAA 241728 28 100.0 32 ............................ TTGCATACTAACCATTTGCGAGAAAATACCTT 241788 28 100.0 32 ............................ TAATTCGATTATTTCGTAAATACATATAACAT 241848 28 100.0 38 ............................ TTGTGAGGCAACCATAATCGCTAAAGCTAAAGCTGAAG 241914 28 100.0 32 ............................ TCTGTTTCATCCACTTCAATATTGATTTCATT 241974 28 100.0 33 ............................ CTCAAATTTAAAATCATTCAAAAACGCAAACAA 242035 28 100.0 32 ............................ TTAATTGATACCGAAGCTGTACGACTTAAAAG 242095 28 100.0 32 ............................ TAGTGAGCGTGTAAGCAAGCAAATAAGCGAAA 242155 28 100.0 32 ............................ TAGATGCAGTAAGCCCCGTTATCCTAAGCGAG 242215 28 100.0 32 ............................ CATGTTTCATTGGTAGGTTTTAAACCACTGCC 242275 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ====================================== ================== 36 28 100.0 32 CTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : AACAATTGATGATTCAGCCTTGGTTAAAGGGACTTCGGGATTACACTACCGTCAGTGCTGTTATGCCTGTACCTGCGAACATAGTAGGTTACAGAACAATTTATCGAGTGCAGAAAAAGAGCCCGCATAATTTACGTAAACGTGCAGTTGCCAAAGGTCGTATGACAGAGCAAGAAGCGTTAACAAAAATTCCAGACTCATTACAGGAACGATTAATATTACCTTTCATACAGATACAGAGCTTATCTAGTCAACAAGTGATGCGGATTTATGTAGCTCAAGGGAATATTCTATCAGAGCCTGTAAAGGGTGAATTATCTAGCTATGGAATGAGTCGTACTACGACAATCCCTTGGTTTTAATTTTCTAGACCCTTTTTTTGAACAAAAACTTAACCTATTGATTTTAAATAAATTAAGTTACCTGAGAGAAAAAAGGGTTTTCTAATCCAATATACGTTAAGCTCTTTAAAAATAAGATAAAATCATATAATGTTTACC # Right flank : AAGATTCATACTTACAGATGCAAAAAAGCCGCTAACTTTCGTTAGCGGCTTTTTCTATATATGGCGGAACAGTTCTGGGTATTAGAGGATTTGAACCCTGCTTTAACTATATAAATGACCCAAAGTAAAAAGGCTGCTGAGTCAAACTCAGCAGCCTTCTTTAATATGGCGGAGAGATAGGGATTTGAACCCTAGATACGCTATAAACGTATGCCGGTTTTCAAGACCGGTGCTTTCAACCACTCAGCCATCTCTCCTAAATTGTCATCTCTTATTAAATAAGAAATGGCGGTGAGGGAGGGATTCGAACCCTCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCACATTGTTGCTGAATCGCTATGCGTTTCAACGGCGGCTAATGTAATCACTTATGCGATATCGGTCAAGGTATTTTCCTGTTCTCTTATTCATTCGCCGACTTATAGATCAATTAGGTCTATTCTCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched CTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //