Array 1 2077334-2075684 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP070366.1 Thermoleptolyngbya sp. PKUAC-SCTB121 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =============================================== ================== 2077333 35 94.3 39 .................................CG GTGCGTGGCGGCGACCACCTGGATCCGGTGCGTTGGGCG 2077259 35 97.1 47 .................................C. CTAACGCCAAGCTTTTCGCCGAACTCGTTTTTATTCACGAGTAAAAA 2077177 35 97.1 33 .................................C. TGTATATGTAGCTCATACAGATAATGGTATAAA 2077109 35 97.1 36 .................................C. GTAAGTATAGCTAATTCCTGGGCTGTGTATCCATTT 2077038 35 97.1 35 .................................C. AAGAGGATCTCTTCACACTCATAGCCAAGCTGCCG 2076968 35 97.1 36 .................................C. CCAAATACCTAAAATGCCGCATCTCCGGCGGTTCAA 2076897 35 100.0 38 ................................... TTCGTGGCGTGACGGGGCGCTACCGCTTCGTGAAGTCG 2076824 35 100.0 43 ................................... TTTGGGTGCAGTCAATCTGGACTGCCTCCGATGGGTTTGTCCG 2076746 35 100.0 37 ................................... AGATTACACACTTTGGTTTGCCTTCAAACGAAATTAC 2076674 35 100.0 36 ................................... CTTGTGACATTGGCAAAGAGTCGGCAGATGAAGCCA 2076603 35 100.0 38 ................................... CCGCCTGAGCTAGTATCAGGGGCAGCTTTTCGTCTAGA 2076530 35 100.0 39 ................................... CGGGAAATTAAAGATACAGAGGAGTATGGAAGCTACAAA 2076456 35 100.0 33 ................................... CTCCCTGTGCTGAGCAGAAGCGGGTGTTGTACT 2076388 35 100.0 32 ................................... GCGCCGAGCGTATGCAGACAGATACCGGTATT 2076321 35 100.0 41 ................................... TTACGGTGATGGAACCTGTTATCCGGAATCCATTTGCCACT 2076245 35 100.0 40 ................................... TAGAGAGTTTCAAAATTTGGTTCTGGAGCTGGGCTCCAGC 2076170 35 100.0 36 ................................... CTCACTTAAAACTACTTCAAACCGCAGTTCCTCCCA 2076099 35 100.0 45 ................................... GACTTCATCCATCGTCAGCTTGCTCACTCCGCCATCCTCGAACAG 2076019 35 100.0 39 ................................... GGGAGTTGGTGCGAGGATCTAAACCAATGATCTCGCCGT 2075945 35 100.0 40 ................................... AAACTGAACCCGCGCAGTTTGTGTTTCCACCAATCTGCCG 2075870 35 97.1 42 .........................A......... ATCCCATCGGTCTGATTTCCCTCTACATCGGTGACATAGAGA 2075793 35 100.0 40 ................................... AATGCAAGATCGGCTACCCCTGCGGCCGATCTTGCATCAA 2075718 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== =============================================== ================== 23 35 99.0 38 CTTTCAAACCCATTTCCCCGCAAGGGGACTGAAAC # Left flank : ACCCCCTAACCACCTGACACATCTCTGGGAACCCCCTAGTTTCTCCTAGAGGACGCTGACCCAAAACCCTTCAGCCAACCCCTCCAAACTCCAACCCAAAGACTACAAGCTTCAACCCCAAAACAACGCATTTCAAAGCTTTCAGAACTTTCGTCAGACAACCAACCCCCTCCCCCCTCCCCCCTCCCCCCTTCCCTCTTCTCTCTTCTCTCTTCCCTCTCCCCTCTTCCCTCTTCCCTCTTCCCCTTAACTTTTTCTTCCATTGACTTCTTTGGCGCAGGTCTTCTATCCTATACCCAGAGATAAGCCACCTCCACGATCTGTCCAAACCTTGAAAGCCGCATAATTCCGTTGAATCGTGTCGATGCCTTATTCAGTAGGTACTTCAGGCGCTAGAGATTCAAGGTTTTAAGGGAGAAAAATCATTTTTGGGGTTCCAAAATGATTACCGTCGATTTTCGCTTACGAGCCATTGCCAGGAGCGGGTTTCAGACAGCACT # Right flank : GCTTGGGAAGGAACAAAAAGCGAAAAACGAAAAAACAACCTTACAGAGCTGATTTGCAAAGAAGCCTGACACCTGACTGCCTGATACTAAGCTGCCTGACACATCTCTGCGAACCCCCGATTTCTCGTAGAGAACGCTGGCCCAAAAGCTCCTTCGTCCAACCCCTCTGGCTCCAATCCAGGGATTTCGACTCCAAGACAGCGCATTTTCGCGGCTTTTGGAACTTGTGTCAGGCAACCAGCTAAACCCCTCCTGAAAACCTATTGTCCTAAGAAATAACGCGCCTCCTTTGCCAGGGCACTTTTTAGGAACTGGTTCGTCCACACTGCCTGATGCCCTGCATCCTGATGCCTCCGCCTCTGAATCCGAGAAGCGTAGTGTATCCTGAGAGGAGCATTAAACGGTAAAGTTTAGTGATGGTTCGAGAAATCATGTTACTCAAACGCAGAGCTATGGTGTCTAAGTCCTCAATTCTCCGAATGCTTTCGGCAGTGGCGGTG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAAACCCATTTCCCCGCAAGGGGACTGAAAC # Alternate repeat : CTTTCAAACCCATTTCCCCGCAAGGGGACTGAACC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA // Array 2 2518460-2496273 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP070366.1 Thermoleptolyngbya sp. PKUAC-SCTB121 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================== ================== 2518459 35 100.0 35 ................................... TTCCGCTATTGGAGTGGGATTTATTCCGCTTCACG 2518389 35 100.0 35 ................................... TCGCTGAGCGAAACTCTGGCTCTGGCAGAGAAGAT 2518319 35 100.0 36 ................................... CACTGTAGGACGGTGGTGATAGGAGAAAGGCCAAGC 2518248 35 100.0 37 ................................... AAACCAAAGTGGGAACCCGTTAGGGCACCCTTAGACA 2518176 35 100.0 37 ................................... TTGGTTAGGGGCGAAAAAGCCGGATTATCCGCGGTCA 2518104 35 100.0 37 ................................... GAACTTCTTTCTGTTCCTGTTGTTCTTCTTGCGAGTC 2518032 35 100.0 35 ................................... GAATATCCAGCGTGAACGGCACGATATCGACCAGC 2517962 35 100.0 37 ................................... TAGCTGCTGCTGACGTTGACTCCGTTCTGAATGTCCG 2517890 35 100.0 35 ................................... CAGTTAATGAGTCTGCTAGTGTAAAGCAACAAGCT 2517820 35 100.0 37 ................................... ACAGTCGTTAGGTGTAAGTCTGTTATTTTTTTTAGCT 2517748 35 100.0 38 ................................... CCTCGCCCACCCCATAGGCACTTGTAGCGCGCTGGCTC 2517675 35 100.0 36 ................................... ATCCGCACCAGTCTGGAAAAGTTCGGGCCGCTGCGA 2517604 35 100.0 41 ................................... ACGCAACTTAAAGTTATTCATGGCGGTGTTGATCTCGGAAC 2517528 35 100.0 40 ................................... CCCGGAATGCCTGCAATGACTCGCTGATCTCTGTCCTCCG 2517453 35 100.0 35 ................................... TTAGGTACCTGCCACTCGCTCAGCGCGATCGCCCG 2517383 35 100.0 41 ................................... AGGACGGACTGCCTGTTTTGGCGTTCAATCCAGATCCCAAA 2517307 35 100.0 36 ................................... CGCGGGGTCAGATGGAATCCAGATTGTTCCAACCAT 2517236 35 100.0 36 ................................... GCTCCGACGCTGACGGTGGCGGCGACGGGCATTGGT 2517165 35 100.0 35 ................................... GACAGAACTGCTTTCCTGATCGTGGACAAGGAGAA 2517095 35 100.0 38 ................................... GACGCCCGTTTTGCGCGATCGCCCCATTTTGTGCCACA 2517022 35 100.0 39 ................................... CCCTCTTTTCCGGTCACGCCAGCGGCGATCGCATCCACT 2516948 35 100.0 36 ................................... CCCGAACTTGGACGCGTTCGCTGCTGGTTCAGCGTC 2516877 35 100.0 36 ................................... GTGTCCAGGTCAATCCGCGGTTCCCAAACCTCGATC 2516806 35 100.0 34 ................................... TTCAGGTAGGGGATTCGCGCCCTGGGCTTGCTGG 2516737 35 100.0 36 ................................... GAAAGCGATTTGCCTCCATCCTGTTGTCGCAGCCAT 2516666 35 100.0 34 ................................... TGGTAGAACGCATCTTCCATTAGATCATGCTGAC 2516597 35 100.0 35 ................................... GACGACGTGCGACGCGTGGTCGGCGAGATCGACCT 2516527 35 100.0 35 ................................... AATACCTACAGCTTCTAAATCATCATAAAAATTGG 2516457 35 100.0 36 ................................... CTGATAGGCTGCTGGATCTGTTCGCTGCATAGCGCG 2516386 35 100.0 36 ................................... GCGGACATTGTCCGCAAGCTCGTCATAATGGGACGC 2516315 35 100.0 38 ................................... GCTATCTACCGCCGTTCGGGAAGGGCTTGTCCGCAGTA 2516242 35 100.0 36 ................................... ACCAGCGCGGCGGCGATCGCCAAAATCAAAACAGCG 2516171 35 100.0 34 ................................... AAAGGTCGTTTACTGGGCAATGAATTTTCTTGCT 2516102 35 100.0 36 ................................... GCGCATGAGAAAAATATTATTCGACTGGCGATCGCC 2516031 35 100.0 42 ................................... TGCCCTTGACCTTGGTGAACCCGGCCCGCCGGGCGATCGCCA 2515954 35 100.0 42 ................................... TTGATGGTCGCAACCTCCGTTACGGATGGGACTGCTATGGCT 2515877 35 100.0 35 ................................... TCCAGCGCTACTACGGGATAGGGGAGTGGGTGTTT 2515807 35 100.0 39 ................................... GGTGCAGGGCGCGCCGCTAGGGTCTACGCCCTTACAGAC 2515733 35 100.0 35 ................................... CCTTTGGAGAGCGAGGGAGCTCCCTCGCCGGGTGG 2515663 35 100.0 37 ................................... TTCGCGCGGCGAAGCTGCTCTGTTGCTTTGGCGATCG 2515591 35 100.0 40 ................................... GCTCCTGGAGCTACAACGGAGCGCAGGAATACGACGGAAC 2515516 35 100.0 35 ................................... TCCAAGCGATCGCGGTCATCACTGCCTGTCCCTGT 2515446 35 100.0 35 ................................... CCTATTCCTGTTGGACACCACAACAGCAAGGATGG 2515376 35 100.0 35 ................................... CAGCTCTCTAAGATCTGCCGATCGAGCCGCCCTTG 2515306 35 100.0 36 ................................... ATGGAAAGGTTGAAAGCCTTGAAAGCCTTGAATGCC 2515235 35 100.0 35 ................................... ACTAGGAGAGCGATTTAGTGGAACTGCCTTCAGTG 2515165 35 100.0 35 ................................... ATCCAGGACTACAACGTTTTTGTTTACAAGCTCAA 2515095 35 100.0 46 ................................... CCGCCACACCTGCGAGAGTTCTTTGCAAACCGAGAAAAGGTGCCAA 2515014 35 100.0 36 ................................... CCATGACGTTGGTAATCTTGGCGATTCCCTCCCCGG 2514943 35 100.0 34 ................................... TTGCCTGTTCTCGTCCTTGCGTGGTGCGGACAGA 2514874 35 100.0 35 ................................... ATCCAGCACTGCGTCCAAGGCCTGCGGAATCGTGA 2514804 35 100.0 34 ................................... TGGGCGGGTCGGCTTTGCTGGCAAGGGCGATCGC 2514735 35 100.0 38 ................................... TAACCTGTTCATACGATACTTTCTCTAAAAGCAAAAAA 2514662 35 100.0 35 ................................... CTGTTACCGGCGTCGCCAACCCCTTCAGCCGCAGC 2514592 35 100.0 38 ................................... GCGCTACCGGCAAACTGGGCGATCGCTTGATGACTGTG 2514519 35 100.0 37 ................................... TGATTAAAGGATTGATGATGGACGCCGAGAATGAAGA 2514447 35 100.0 34 ................................... ATGGTTGGAAGTGCGATCGCCATGATTGTTAGTG 2514378 35 100.0 39 ................................... ATTCCCGGACTCTCCCAGTCAGTTTTGCAGACTTGATCG 2514304 35 100.0 35 ................................... TCGTTGCGGGTCGCAATGTCGATTAAGGTGGCGAG 2514234 35 100.0 35 ................................... ATTTGCTTCGGGGGCGGCGCAAGCGTCGAGGATGC 2514164 35 100.0 36 ................................... ATTGCGCTTGCCATAATCGTTTCGCTCCGTTTGATT 2514093 35 100.0 36 ................................... GCGGTAGGGGCTGACAGATTAGCTCCGGCCGCTACT 2514022 35 100.0 36 ................................... ACAATGATCCGGAGCCTGCTAGAGGAGCAACTCGCC 2513951 35 100.0 35 ................................... GCAACTTCCTCTACTGGATGCCTAGGGTCGGACAG 2513881 35 100.0 35 ................................... AGCCGATCGGCAGTCCACTAGGTGCAGGGATTCTG 2513811 35 100.0 35 ................................... GATGTAGATTTTACATCAAACACAGATCCAATAAC 2513741 35 100.0 35 ................................... AAAGGATTTTTGCAAATCCTGTTTGTCAGCGTCCT 2513671 35 100.0 35 ................................... GATTTGAAGCCATTCGTCCGCTTTGGTCATGTTTT 2513601 35 100.0 35 ................................... TTTTTATTGGCGTGGCGATCGCCATTGCAGCAGAG 2513531 35 100.0 35 ................................... CTGGCGAAGCCATTCGTCCGCTTTGGTCATGTTTT 2513461 35 100.0 35 ................................... TTTTTATTGGCGTGGCGATCGCCATTGCAGCAGAG 2513391 35 100.0 38 ................................... CTGGCGGGGCTAGTGCCATTGGCGTTCATCCTTGTCCA 2513318 35 100.0 37 ................................... ACCCCGCCCTTTTCGCCAGCCCGCCGCTGGAACTCAA 2513246 35 100.0 36 ................................... GAAGAAAATCAAAATCGAAATCGAAATCGAGGGCAC 2513175 35 100.0 37 ................................... GACTGATCTTCAAGGTTGAAGGCAGCCAGAAGTTAGT 2513103 35 100.0 35 ................................... TAAACCTATCCTAGATAGAGATAAGAACGTGGCTC 2513033 35 100.0 36 ................................... GTCGAGGAATCCAAGCAGTCCCAATACAACCGTTCA 2512962 35 100.0 36 ................................... TTTTCGGCGGCGTTTTCGTCAATTGCGATCGCGTCA 2512891 35 100.0 39 ................................... TTTAAAGGGGGCGCTGGCGGAAATCCCGGCCAATGAAAA 2512817 35 100.0 37 ................................... AATTTGGCGCAGCGTTTGAAGAGCTGAACAAGTCCCC 2512745 35 100.0 36 ................................... TTGAATAGTGCGGTTCTTTTTCAAACCACCAAATCA 2512674 35 100.0 36 ................................... GGATGCGATTTCAGCACACATTGACGGTGGGCATGG 2512603 35 100.0 38 ................................... AGTCTATTATTAATACGCTGGGATCAAGCGCCAAGGAG 2512530 35 100.0 35 ................................... TATTTTCTGAGCCCCGAAATCCTAGGCTATCGGTC 2512460 35 100.0 35 ................................... TCAAAAGCTCGGCCCAACCGATTGCCGCGGCTGCA 2512390 35 100.0 38 ................................... CGGGCAGCCACAGCCCCGATCGCTCCTGTCACGGCCCC 2512317 35 100.0 34 ................................... ATACGTAAAACAGATTTTATCAATAGAGATAAAT 2512248 35 100.0 40 ................................... AGGCTAGATTTCTATGGTTTCCTTGTTCATAATAGTCTCG 2512173 35 100.0 43 ................................... AGTTGTAGATATCCCACGATAGAATTTAGGTTCTACCAGGCTA 2512095 35 100.0 36 ................................... CAGGTTCTGCATCAAATCAAGACGTCAAACTCTTGC 2512024 35 100.0 35 ................................... GTTCTGAATTTGGCTTTCAAAGTCTGCCAGTCTTC 2511954 35 100.0 35 ................................... TCTTTTATTAATACGCTGGGATCAAGCGCCAAGGA 2511884 35 100.0 38 ................................... ACTAGGTTAGGCTAGTGCCCTAGTTTAAAATAACACAG 2511811 35 100.0 37 ................................... ATCCAGGTTGACGCCGACCGCATAGTTGACCAGCTCC 2511739 35 100.0 36 ................................... CGCCAGCGGGAAGACATCGCGTTCAAAGAGCGAGTA 2511668 35 100.0 35 ................................... TGCTGGTGCAGCTGGAGACGCCGTTGTCCGGCAAG 2511598 35 100.0 37 ................................... CATTTGGAACGGGGTTCAGGACGTGGGGCAACCGCAC 2511526 35 100.0 34 ................................... GCCAATAAGCGCGATCGCGCTTATGTTCAAAAAG 2511457 35 100.0 37 ................................... TGGGAAAACGCGGCACAGCACAAGCTCCTGCGAAAAA 2511385 35 100.0 36 ................................... GAGCTCAAAACCAGGCAAAACTTTGCGGCGCAACGC 2511314 35 100.0 38 ................................... AGCTTCACAAGACAAAAACAGCTAGAACTGCACTCCCA 2511241 35 100.0 34 ................................... TGGTTGATTGAAATGCGTTGGGGTCGTTTTGGTG 2511172 35 100.0 34 ................................... CGGATGTTGGGTCGAGGAATCCAAGCAGTCCCAA 2511103 35 100.0 42 ................................... AAGATCAGTGGGTGCAGTACGGCGTGGCTGATAATGCTTCAT 2511026 35 100.0 35 ................................... CAAGGACTAGATCCCCGTGGCAACTGGCGGGTGGA 2510956 35 100.0 36 ................................... TCGTCGCCAGCGGCGTAAGTTGCGACCTGCGGGTCG 2510885 35 100.0 35 ................................... ATCAGGATCAGGCGTCAAACAATAATGGAGGTCTT 2510815 35 100.0 35 ................................... AATAAATCTATTCAGCGCTTTCTCTTTCTCAAGTC 2510745 35 100.0 38 ................................... GAGGATGGGCTGAGCTTTGAGGATGTGCTGATCCTCAA 2510672 35 100.0 35 ................................... CGCGTCTCTGGGAGCCGGACAGATACAGTTTGGGT 2510602 35 100.0 35 ................................... GTGTTCGTGCCGGTGCTGCCGACAAGGGCGATCGC 2510532 35 100.0 36 ................................... CTGGCGGGGCTGCTTACACTCAGCGTCAAGCCAAAA 2510461 35 100.0 37 ................................... CTGGCGCAGGCGGAAAACGTGCGCGCAATGGCGCTGA 2510389 35 100.0 35 ................................... AATTGTCACACGGGCGATCGCTTGCGGCAAAAGGC 2510319 35 100.0 35 ................................... TGATACCATTTGAGTAGAGAAATTAAGTGGTTGGT 2510249 35 100.0 38 ................................... AAAGCCATTCGCCCCGGCGAAAGGGTTCGTTATAAGCC 2510176 35 100.0 44 ................................... GGAAATAGACATGCGTTAGTTAACGCCTGTCTCACCTCCAAGGT 2510097 35 100.0 39 ................................... AATCGGCCAGTGCGACTTGGAAACTCCCGTTTGCTTCCA 2510023 35 100.0 35 ................................... CTGCCGCGGCACACTAGATCAATGTAGACCGGGCG 2509953 35 100.0 37 ................................... GAGTTTGTGCGGCTGCGCCAGCACAAAATTGATCGCG 2509881 35 100.0 35 ................................... CCGGGGCATCTGGCCCCGGCGGCCGCATCCACGGG 2509811 35 100.0 35 ................................... GGTCATAACTTGCCTTACTTTCACGATTGGGAACG 2509741 35 100.0 40 ................................... CGCTTGCCCGGAGGAGACTGGGGAGTGTATCAACTCCCCG 2509666 35 100.0 37 ................................... CGGTTCAGTTGCTCCACACTGTACTGGTCAAAAATAG 2509594 35 100.0 35 ................................... CCGGCTGTCTGGCGTCCTCCGGACGAAAACGGACA 2509524 35 100.0 36 ................................... GAAAGTAAAAATAAAGCAGCAATAATATACACACTA 2509453 35 100.0 36 ................................... GAACGGCACGATATCGACCAGCACCTTGGCGTTTAC 2509382 35 100.0 35 ................................... CAGCTCAAAACCAAACTTGCGCCCCACCAGCAAGC 2509312 35 100.0 35 ................................... CCTTTGAATTCTAGCTTTGACAGCTTGGAGTTAAA 2509242 35 100.0 41 ................................... GAACTCAAAGAACTTGCGTCCGGGCAGCTTGCGACGGTTGA 2509166 35 100.0 35 ................................... AGCATTATCGAGGACTGGCTTACCGAAGCCGAAGC 2509096 35 100.0 36 ................................... CGCTGCGGCTACTGCCCCGGCGATCGATCTATGACG 2509025 35 100.0 35 ................................... CCGTCAAGGCAGCACGAGGGCCGGGACGAGGGTTT 2508955 35 100.0 33 ................................... ACCCGTAGCCGCCCGTCTGGCAGTTCTTCCCAA 2508887 35 100.0 39 ................................... CCTACCAGAATGCCAAGCCACGGGAAAAAGCCCGCGACG 2508813 35 100.0 38 ................................... TGCCGGAAGGCTACGGGGCGCAGGACGCGCTGAATAAG 2508740 35 100.0 37 ................................... CGGGATTTGACCGACATTTTGCCGACCTTTTCGGCAA 2508668 35 100.0 38 ................................... CCTGGTGGAAAAGCAGAACCTGGAAGCAAACGGGAGTT 2508595 35 100.0 35 ................................... AAAGAGCTAGGCGTCAACCTGTCGTGGATGGGGAG 2508525 35 100.0 37 ................................... GGCGCAGCCTGGCGGGTCACGTTCGGGAAATAGAGCT 2508453 35 100.0 42 ................................... CGGCGTGACCGCATAGGGGTAGTAGTCCAGCAGGCAGCGCCG 2508376 35 100.0 36 ................................... AGCCACGGGCAGGACGGTCTGTACGCCCTGGGGAGT 2508305 35 100.0 35 ................................... GACATGAGCGCGTTTCAGTCGATGCCAACACCCGC 2508235 35 100.0 35 ................................... AGGCGATTGAGGACAAGCGCACTGGGCAGCCTCTG 2508165 35 100.0 42 ................................... GAGTCAGCAATTGACGGCGTACTACGGCGAATTTCTGGTCTC 2508088 35 100.0 35 ................................... CCGGGACGCCGTGCCACCCAGGCCTGGAGGGCCGC 2508018 35 100.0 34 ................................... GAAGGCAGGCGGCATCAAAGCGGCGATCGCCCTC 2507949 35 100.0 39 ................................... AGCAGAGATGACGAAATGATTTCCAGGGAGACGTTTGCG 2507875 35 100.0 38 ................................... ATACTAGCGTTAGAAAAAGACTTATGAAGCAACTTCGT 2507802 35 100.0 36 ................................... ATTGCGGACGGCTTCCACCGCTCCACCGTAGGGCGA 2507731 35 100.0 36 ................................... TTCCGGCTCTAGACAAAGCTGGACGCAGGTTGTCGA 2507660 35 100.0 36 ................................... AGATACACAAGACAAAAACAGCTACTAGCAGAACGA 2507589 35 100.0 35 ................................... CGAAGCATGAGCGTCGGGAGTATGTCACAAACCAA 2507519 35 100.0 36 ................................... AAGGCAGTGCAGCGTACCACCCGGTCACGTTAGATA 2507448 35 100.0 36 ................................... TTACGTCAATCGCGTAGTCTGTCGTGGGGGCATAGG 2507377 35 100.0 38 ................................... TGCGGAAAACGGTTCCGAGATCAACACCGCCATGAATA 2507304 35 100.0 36 ................................... GGGACGATTTCGGTATCGATCACCGTAAACGTAGGC 2507233 35 100.0 35 ................................... TAAGCACTGCCATGCCTGAATTCAAAATTAAGGGG 2507163 35 100.0 39 ................................... AGATCGTGGGAACTGTCGAAGAAATCCAGCAAATCGAGG 2507089 35 100.0 35 ................................... CGGAATGGGGCTAGTCTGGGTTCAATCGGGCGATT 2507019 35 100.0 35 ................................... TAGCGGAGGAATCCGGCGATCGCGCCTACGCTCAG 2506949 35 100.0 39 ................................... CTACTTTCGTTACTCTGACCGCGGTTTATTCAGCTAAGA 2506875 35 100.0 35 ................................... GATTTGCCCGAAAGCTGGGGGGGCTTTGGGTGGGC 2506805 35 100.0 34 ................................... TGCTCCCCCCACGTTTAAGTTTAGGGTTTCGGGC 2506736 35 100.0 37 ................................... CTACGGTTGCCACTGTAGAGGACACCAGTTCCCTGAT 2506664 35 100.0 36 ................................... GAAACATTATTGAAGAAGCAGAGGAGGAATGGGGAT 2506593 35 100.0 37 ................................... GACGCGATCCGCTATGGCTGCGCTCCGCTAATTGAGG 2506521 35 100.0 36 ................................... ACGAAAAACGCATAGTCGCAAAAGCCCTGATCGATC 2506450 35 100.0 35 ................................... CCTTTGGAGAGCGAGGGAGCTCCCTCGCCGGGTGG 2506380 35 100.0 37 ................................... TTGGGTCGTTCGTCATTATGGATATCACTAGTAGTCT 2506308 35 100.0 41 ................................... AGGAGCAACTCCCTTGGTTAAAGGACTATCTAAAGGAGATT 2506232 35 100.0 37 ................................... GTAGAAGAAATCGAAATCGAGGACACAAAAGCGCAAG 2506160 35 100.0 38 ................................... CGCCCTTCCATTGCGATTCGATTGTTGCTACTGCCTGC 2506087 35 100.0 36 ................................... ATCGATCCCGACTACTGCGATCACAAGATTGCCGGG 2506016 35 100.0 35 ................................... CGGGAATTCGGTGAATTGAGTCTTTCGCGCTGGCG 2505946 35 100.0 35 ................................... TAAACCCAGTCTGGGGAGGAGGAGGGTTAAGCGGG 2505876 35 100.0 43 ................................... GAAAAATTCCGGAGTCTTTCCGTTGACCGTCCCCCCGCCCCCA 2505798 35 100.0 36 ................................... ATCTTACTAGCATTCAATGGTAAATAAACAAATATG 2505727 35 100.0 35 ................................... AGTTCATTGGCCGCCAGCGTGACGCGATCGCTCTG 2505657 35 100.0 42 ................................... ATATCTTTTACGCCGTTGAAATTGCGGGAAATAAACGAACCC 2505580 35 100.0 35 ................................... ACCTCCTATTGGCTAACTAACCTTACTTCGGTAAC 2505510 35 100.0 37 ................................... AAAGGGAAACAAAATGACCAAATTAAATTATGAGGAA 2505438 35 100.0 37 ................................... CGATTTCCCTATGTTGACGACAACTGCACCCACTCCG 2505366 35 100.0 35 ................................... CGCTTCATTAGGTCGAGGAAGGCGCCAGACGCATC 2505296 35 100.0 35 ................................... TCATACTAAGTTAGATAGGTAAAATAAGTCTTTAT 2505226 35 100.0 35 ................................... AAATTCAGGCGCGGGCGGCTGAACTGGGGATCAAC 2505156 35 100.0 35 ................................... TTAGACGGGCGATCGCTTGCGGCAAAAGGCCGCCC 2505086 35 100.0 38 ................................... ACGCAGTCTGTCGAATCGTTGCGGCAAACGGACTCGAT 2505013 35 100.0 37 ................................... TCAGGCAGTCCATCAGTCCAGCCGTACCGCTTGGCAA 2504941 35 100.0 35 ................................... TTTGTGGTAGTCACTTCCCTCTGTTGCGCTGTTGG 2504871 35 100.0 34 ................................... TTTTCGCTTACCTACGAAGGCAAAGACATTACGG 2504802 35 100.0 35 ................................... TGGTAGAACGCATCTTCCATTAGATCATGCTGACG 2504732 35 100.0 38 ................................... TTGGCTGGCTTCGTCGCGGGCTTTTTCCCGTGGCTTGG 2504659 35 100.0 36 ................................... AACAACAGCGTTGCTAAAAGCGGTGATTTTTTCATG 2504588 35 100.0 34 ................................... TTTAAGCGCAGCACGGGCTGCTCTGCGGGAGCCT 2504519 35 100.0 37 ................................... TTGGCTGGCTGGCTAAGCCAGGATACGAAAAGTTGGA 2504447 35 100.0 36 ................................... AGCCGGCACACCTTCGAGAAATCTTTGACCGAAGAG 2504376 35 100.0 35 ................................... GAGTATAGCGACAAGCTTCCTGGGTTAGTGGTGCG 2504306 35 100.0 38 ................................... AAGACCGACGAAATCCGCGAACTGCTGCAGCGTCGTGA 2504233 35 100.0 35 ................................... CTTTTATTGCTGCTGCTGAAATGCCTCGCTCAAAA 2504163 35 100.0 39 ................................... TTGCTTGTATTACTCCTGGCAAGGCGATCGAAATAAAAG 2504089 35 100.0 38 ................................... CCTTTGGAGAGCGAGGGAGCTCCCTCGCCGGGTGGGGC 2504016 35 100.0 35 ................................... ACCGTCCCGCCAGCAAGGTAGCCGGAGGGAGGAGA 2503946 35 100.0 35 ................................... GGGTTGGCGGGAGCGCTGGTCAAGGTCGGCGCAAT 2503876 35 100.0 34 ................................... TCCTGTCAAAGCTGATAATTCGCGGCCAGAGTCG 2503807 35 100.0 35 ................................... TGATAGCATTTGAAGGAAATTAAGTGTTTGCGAGA 2503737 35 100.0 36 ................................... TGCCCGTGCGCGGACGAATTGACCTGGCGGCACTGG 2503666 35 100.0 35 ................................... AAATGGTTCCGATTTTATTCCGAGTTTCGTCACGA 2503596 35 100.0 35 ................................... AAGCTGGTCGGACGCTGCAACTGGAGGCGACGGTT 2503526 35 100.0 36 ................................... CGGTTGGGTTGTTTTTTTCGTCGTTCAAATAGTTGG 2503455 35 100.0 37 ................................... ACTGGAAACAGCAAGCCTCGCAAGCCTCGCAAAAAGA 2503383 35 100.0 38 ................................... TAGACCACAGCTCCGCTTGGCAGTTTGAGCTGTTTGCG 2503310 35 100.0 35 ................................... AAAGACAAGATTCAACTGCAAAAAGTGGCAGGGAC 2503240 35 100.0 35 ................................... AGCAACGCTGTAATCCCTGAGGGATGGGCTCAGTG 2503170 35 100.0 35 ................................... CCTGACGACTGGGAGTGCGTTGAATGGAAAGCAGC 2503100 35 100.0 38 ................................... AAAAAAAAGGCTCTCTTAGAGCCGATTTAGACCCTAAA 2503027 35 100.0 37 ................................... TACAAAAAATTCCATATTTCATTTTCCAAAGCGGAGC 2502955 35 100.0 34 ................................... CCGAAGTTTTGGCCGTCGATATCGACGACGGTTG 2502886 35 100.0 37 ................................... AATCAGAAGAGAATTGACGCTTGTCCCAGTTCTTAAT 2502814 35 100.0 38 ................................... TTTTTCTCGCTTGGTCTGGAAAGGACTGTAGATCCAGG 2502741 35 100.0 37 ................................... TTGCCACGCACTTGCAGCCTGACGTCCTTGAAGGGAT 2502669 35 100.0 38 ................................... GGTCGGGCGGGCGGCGCAATGCGCCAGTTTGGACTGCT 2502596 35 100.0 37 ................................... GCAAGATTAAATTATGAGGAGCAACTCCCTTGGTTGA 2502524 35 100.0 34 ................................... ACATGAGCAAGAACGGCAAGAACGATTTGGCGAT 2502455 35 100.0 36 ................................... TCGGCGTCCAGGCAAAAGCTAAATTGTCGGGGTCGC 2502384 35 100.0 36 ................................... AGGAACAGTTACCTTGGTTGAAAGATTACCTAAGAG 2502313 35 100.0 35 ................................... CCCCCACGACAGACTACACAATCGACCTGGCGACA 2502243 35 100.0 38 ................................... TTGTCCAGCAGCAGCAGCGGTCGCCGCCACCATTGCAG 2502170 35 100.0 36 ................................... TCGCGGCACTTTGTCCACAGGCGTCAAACCGCGCCT 2502099 35 100.0 43 ................................... TGGGAGGCAGGGCGATCGCTCAACGTGCCGCGTGGTCTAGACG 2502021 35 100.0 38 ................................... TGCCGGATGGGACGAGCTGATCCGCCCTACGGGTTAGG 2501948 35 100.0 36 ................................... ATAGGCAGGCTTTCAGAAGCCTTGAGAATAGCTCGC 2501877 35 100.0 36 ................................... CCGTCATCGATCAACAGCAGCGCGTTCGCACAGGCG 2501806 35 100.0 39 ................................... ATAGAAGGCGAATCCTTTGTCGACTGGGTTCGGCTGTCA 2501732 35 100.0 37 ................................... GCAACGCGCATCCAAGGAAACGCAAGCCGCTGCTAAA 2501660 35 100.0 35 ................................... GGCGATCGCCCTGTACAAATCACCTGCACAAACCG 2501590 35 100.0 37 ................................... TTATTGAATAGAAAAATATCGTAGTTTGTGTTTGCCA 2501518 35 100.0 35 ................................... TGACCGGAGCAGTCAGGATGTTGATTTGGTTTGCC 2501448 35 100.0 34 ................................... GTTCAGAGCCTGCTAGAGGAGCAACTCGCCTTCG 2501379 35 100.0 37 ................................... ACTATACACGCTTTCGACTACAAAATCCAACCGGGTC 2501307 35 100.0 37 ................................... TTCCTGTCAGTCCTTCTGCGGTTGTTCCTGAGACCAA 2501235 35 100.0 38 ................................... CTTGCAGGATCTGCATTAAGCTTTTCTGCGGGTCGTTT 2501162 35 100.0 35 ................................... GTTGGACGTGCGGGGGGAAACTTCAGATCAAGCTC 2501092 35 100.0 34 ................................... GAATCGTCGCGGCGAAAGGTTGGCAGCACTAGCG 2501023 35 100.0 35 ................................... AAGAATGGGTAGTTAACTTAAACACAGCCCGCGCT 2500953 35 100.0 35 ................................... ATAACTCGCGTTTGCCGTCACGTTTTCTTTCTCGA 2500883 35 100.0 37 ................................... ATTCGCGCACCTATTCCGCTGCCTTGGCTGAAACCTA 2500811 35 100.0 38 ................................... TGCTTCTAGATCAACCTGGTAAAGCACGTCATCATCAG 2500738 35 100.0 36 ................................... TTGAAAAACTTAAAAAAAGAATTAATAGATTATCTA 2500667 35 100.0 36 ................................... TTCCCCTATTGAACTGTATGTCTATCTAAAGTACGG 2500596 35 100.0 42 ................................... CCCGAATTTACTGACGAACAGCTCTACGGAGCAAGCTCGCCC 2500519 35 100.0 35 ................................... AAGAATGAACCGCCTAGGCTGGTAACCGTAGGGCG 2500449 35 100.0 36 ................................... GTCGCCACAAACCGCGCTGTTGGCGCCGACACCCGA 2500378 35 100.0 35 ................................... GATGGCGACGCGGCGCATGGCTCCGGGATTCTGTA 2500308 35 100.0 35 ................................... AATCCATTCTTACTTCCTAAAGATAGGAAGTACTC 2500238 35 100.0 37 ................................... GTACGGATTATGCGCTCTTGTCGAATTTCGTGACGAT 2500166 35 100.0 35 ................................... GCTCCATCTCAAACTAGGAATAGAAAAAGCGCGGG 2500096 35 100.0 37 ................................... AAGTTTCCCCCCGCACGTCCAACCACTCTTTTAGACG 2500024 35 100.0 36 ................................... GCAGCACGTTCAGCAAAAGGACGCTGACAAACAGGA 2499953 35 100.0 38 ................................... AAACAGTCAAACTTTATATTAATGAAGGTATTTTACAA 2499880 35 100.0 36 ................................... TACTGTTCGTGCGCTTTCGCTGTTGTGGGCGAAAAC 2499809 35 100.0 35 ................................... TCGTAAATTGAGACGATACTAGGGGCGATCGCCCC 2499739 35 100.0 38 ................................... TCTTGAGCAACGGCTAAATAGGCGAATCACGACTAGAA 2499666 35 100.0 36 ................................... AGTTTGACAATTTTTGGGTTTGGTACTGCAAAGCTT 2499595 35 100.0 38 ................................... TGCCTGACCAAGTGGGGGAGTTCTTTTTAGAGGGCAGC 2499522 35 100.0 40 ................................... GGCGAAAACGCAATCCACCCGGCTGAGTTCTTTGCCAGGT 2499447 35 100.0 36 ................................... TATCTTGATCCTGCTGAAGATCGTCAAGTTGGTTTA 2499376 35 100.0 37 ................................... GCGCAAGCGGCGCATTCGGCAGCCGCGCAAATCACGG 2499304 35 100.0 37 ................................... CCAACCGGATGCACGGTTATCTGCCGGTTGCTCACAT 2499232 35 100.0 37 ................................... GAACTATTCAGCATTTAAATCATGCTGAAGAAGAGAA 2499160 35 100.0 37 ................................... CACCGAGTCTTTTGCGCTGGAGGGTTTATTTGTGTCA 2499088 35 100.0 45 ................................... TTCCTGGTCACATGGATATGCATTCCGCACTGATAGTTGTAGCGG 2499008 35 100.0 35 ................................... GCGATCGCCACTCCTTTGCGTTGGGCGATCGCCTT 2498938 35 100.0 37 ................................... TTCTAGTCGTGATTCGCCTATTTAGCCGTTGCTCAAG 2498866 35 100.0 36 ................................... TACAAAAACTCGTCATCGATCGAATTAAAGACAGGG 2498795 35 100.0 35 ................................... TTAATAAGGACTTATTTACCCTATCTAACTTAGTA 2498725 35 100.0 36 ................................... CGGAAGTGCGACCCTATCTCGTGCGATCTCGGATCG 2498654 35 100.0 37 ................................... CTTCTGGATCTGTTTCTGTTTCTGTATCTGTATCTGT 2498582 35 100.0 35 ................................... CGGCGGTTCCGGCGATCGCAACACCAGCTTCTCCA 2498512 35 100.0 34 ................................... CCGCGATCACCGTAATTGTCGACGCCCTTCAACG 2498443 35 100.0 35 ................................... GTATTCACCGAAATCCCCGCAGAGATCACGGTGCT 2498373 35 100.0 35 ................................... CCACTTCCTGTTCAGCTCCCTTCAATCCCCGAATC 2498303 35 100.0 35 ................................... TGCGACTCCAGCGAACCGTCTTGGGGTGATACGGA 2498233 35 97.1 35 ............................G...... TGTGAATACTACCGAAGAATGCACCTACAGGTTGG 2498163 35 97.1 35 ............................G...... CGCTATCTGGAATCCTGGAGATTGCGATTACTGGG 2498093 35 100.0 35 ................................... ATTGGTACTGGGCTATCTAGGTGGAATCAATCTTT 2498023 35 100.0 37 ................................... GTGAGAGTGTAGTGATTGAGGTACCCGATATGATGAT 2497951 35 97.1 35 ................................T.. GCTCTCACCACCACCACCACTCAACCCAAACTGGC 2497881 35 100.0 36 ................................... AAGTCACCAGCAGCGACCATTCCACCGTCTGCGTCC 2497810 35 100.0 41 ................................... TTGGGACGCTTGGTGCTTGCTGAGATTGAAGACGCTGCCAA 2497734 35 100.0 39 ................................... GAGGACTGGTATGAGGACTATCAGGCGACCAAGGGCGAA 2497660 35 100.0 35 ................................... GAGCATCAATGTATCGACGTACAAAGAGAGAGTCG 2497590 35 100.0 39 ................................... CGGCTATCTGAACCCGACTACTTGCAAGCACGCAAGTGG 2497516 35 100.0 35 ................................... TTGGCACCGACTGACTTGGGAAACGAACCGCTGAA 2497446 35 100.0 37 ................................... ACTGGATCCGTGTTACTCGATTCTCAGGTGCAGGTGC 2497374 35 100.0 38 ................................... GTACAGCGTTCGAGGAAGTCAGCGCTCAGTTCCGACTC 2497301 35 100.0 34 ................................... AATATATCCGACGACTACGCTGGGGGCTTCTACT 2497232 35 100.0 40 ................................... GTGAAAGATTTGGGCATTCCATCCTGGGCGGGGACAGCGG 2497157 35 100.0 36 ................................... GTATTGCCACGATTACTTTGCCCCAGAAAAGGTTAC 2497086 35 100.0 35 ................................... AGCCAGTAGGTTTGCCAATCCAAACGGGTCGATAG 2497016 35 100.0 36 ................................... TTGGCGCAAACAACGATCCTTTTATTGATAGGTTGG 2496945 35 100.0 37 ................................... TGGAGAGAACCTGCTCTTTGGCGCGTTCCTCCAGAGT 2496873 35 100.0 37 ................................... TCAATTGAGTTTGAACTCATTTTGCTCCATCTAACCG 2496801 35 100.0 36 ................................... TGCGCCCCAGGCATGATGCGGAATGGGCGAGAACTT 2496730 35 100.0 36 ................................... TAGCACAAGGCTGCGTTTGCGAACTCCGTTAACTAC 2496659 35 100.0 35 ................................... TGATTAAAGATTCCATGAGCCTCATAGTTGTGGTG 2496589 35 100.0 34 ................................... ATCCGGGGGCGATTATCTTTACCGTTGCAGCCCT 2496520 35 100.0 35 ................................... TGCCAATCGACCACTGTCACTGTGCCAGTAGTGAA 2496450 35 100.0 38 ................................... TGCGAGTACCAAGCGTAACGGAGTGCGTCGGGAAAGTG 2496377 35 100.0 35 ................................... ATTGTCTCGATCGAAGAGACGGATGTGGTGGATGC 2496307 35 97.1 0 ..........................A........ | ========== ====== ====== ====== =================================== ============================================== ================== 311 35 100.0 36 GTGCCAAACCTCTGATGCCGTAAGGCGTTGAGCAC # Left flank : CGTGACCCAAAGCGCTGGCGGAAAGCGTTTCAGTTGCTCAAGGGCTATGGCGAAAGTTTGCAATATTCCATTTTTCGCTGTCGCCTCACGCAGCGCGATCGGGAAAAGCTGCGATGGGAGCTTGAGAAAATCTTGACACCGGAGGATAGCTTGCTCATTGCTGGACTGTGCGATCGCTGCGTTGAACGAATTCAGTCATGCAATCGCCCTGAAGCCTGGACAGTCCGCCATGATTGTCACCGTGTTTTCTGATGCAAGGATCGGTGCGTGTTAATCAGAAGCATGGCAGTCTATCGGCTAAAAGCCTTGTCTTAAGCTGGACTGAAAGATATGCCAAGTCTGAACAGATCCTTGTATGCCTCCAATCCCATGAAAAACGGCTGGTCTAGAGTTTGAGTGATGGCTAGAATAGGAGTATATGAGTAGGTTGTCCTAATGCTGATTCAATGCTTGCAAAACTGGCTGGCGATGCTTGCTAGACAAGAGTTTCAGCATCCGGC # Right flank : TCTATAGCACTACGTATTTGGGTTAGGACGTTATCATAGAGCCATCAGGAGAGTTTAGGAACACCTATGCCCGCCCCCTACAGCTACGACTTGCGTTGCAAAGCGATTGAAGCCGTGAAACAAGGTCACCGCAAAGTTGATGTCTGTCGAATGTTCAACATCAGTCGCAATACCTTAGACCTGTGGTTGAAACGGGAAAAAGAAACGGGAGATTGCCGAGCGATGACTGGGTTTCAGCGAGGAAATCGGCATAAGATTACCGACTGGTCGCGCTTTCGTGAGTTTGTCAAGCAGCATGGGGATCAGACCCAAGCGAGACTGGCAACCCTGTGGGGGGATAATGTGACACAGCAGGACATCAGTCGAGCCTTGCGAAAGATTGGGTTTAGTCGAAAAAAAAGACCTATGGCTATCGGGAACGAGACGACCTGAAGCGACAGGAGTTTCAAGAGCGCTTGAGGAGTAAGCTGCCGCATCAGGTTGTCTATGTCGATGAAGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCCAAACCTCTGATGCCGTAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 3 2890289-2886054 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP070366.1 Thermoleptolyngbya sp. PKUAC-SCTB121 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ================================================= ================== 2890288 35 100.0 35 ................................... TTTTTGGTGGGCTGAATTGCCCCTGCGTCCATCAA 2890218 35 100.0 37 ................................... GAGTCCCTGAAATGCCGTCCACTTTGTTTATCCGCGA 2890146 35 100.0 42 ................................... CTGTTTCCGACATGCCCGACAGCCCTCCAGGGGTCATCGCAG 2890069 35 100.0 32 ................................... AATTACCTCCAGGTCAGTGTCGAAAATCTGAA 2890002 35 100.0 38 ................................... TGTATACTGTCTCGTTTATATAGGAAGTTGATCTGCTA 2889929 35 100.0 36 ................................... CAAAGGCTTCATGCTGGCGATCGCCGCCATTAAGGC 2889858 35 100.0 39 ................................... GGAACACCCATAACGGACGGGGCGCGCAAGAATCCTCGA 2889784 35 100.0 40 ................................... CCAATCCTCCCAAACTAAAGAAGAAAAAGAAGTAGAAGAT 2889709 35 100.0 38 ................................... AAGACTCTCCCTACGTAGTTTTTGCCTACAAAAGAATT 2889636 35 100.0 38 ................................... GTAGCAGACAGAACTAAAGATTGGGAAGTAATAGCAGA 2889563 35 100.0 35 ................................... TTTTTATTCTTATTGGCTTTTATGAATTCGTTATA 2889493 35 100.0 37 ................................... TGTTTGGGTATAAAAATTTCCTTGAAACAAAGCTAGC 2889421 35 100.0 32 ................................... TCGTTTATCTGTAGAAATAACTGAAGGCAATA 2889354 35 100.0 40 ................................... TCCTTGATTTAGATCAGCAATCCTACTGAATGCTGCCCGA 2889279 35 100.0 39 ................................... GATGTAGTGTCCTGGGAATAAAATAAAAGGCAGCCTACT 2889205 35 100.0 36 ................................... GGGGGATTGGAAATTGGAACGTAGCCGATGTCCTTT 2889134 35 100.0 36 ................................... ACTTGACGATGAAGGGTGGGATCTTGCGACTAAAAA 2889063 35 100.0 38 ................................... AAGAGATAAAAAAACCACAGCAGCTTTTAAACTGCGGG 2888990 35 100.0 39 ................................... ATGTTATTAAATTCTATACATTGAGAATGGAAATCTGCA 2888916 35 100.0 38 ................................... TTTGCCGTAGTTCTGTATCTGAAATCGTATTCTAGTTC 2888843 35 100.0 48 ................................... AGGCTGGGATCGGGTATTGCCGGACGGCACCCGCGTCCCCGCGACTGA 2888760 35 100.0 34 ................................... ACCCTTCGACCAAAAAGGGTCGCTTTACGCAAAT 2888691 35 100.0 38 ................................... TAGCTAAGGTTACTAGGTTGTGAGTAGGCAAGATAAAT 2888618 35 100.0 34 ................................... ATTTTACATGCTTAAATCCTTTGTTTGGAATCGA 2888549 35 100.0 38 ................................... CTGGCGGGTTTGTTGACCTCAAAGAGTTGCTCAATTTT 2888476 35 100.0 44 ................................... TGTATTTGCTACTGCTGCTATGGAGTTCTATGGTGTTAGATGTC 2888397 35 100.0 44 ................................... TATCTTCATCTAAAAGTGTACAAGGCAAGATAGCAGCTATTCTA 2888318 35 100.0 39 ................................... CTTCTTCTTTGGTATCATTTGAGGCTGAAGCTGAGCCAA 2888244 35 100.0 39 ................................... CGTTTTGACCTACAAGACAAATATCATCTCTCAGTTGAA 2888170 35 100.0 40 ................................... AAGCCCATAGGACGCAATCTTGATAGATGTACCTTCAGGG 2888095 35 100.0 36 ................................... CCCATAACTTTCATTTGAGATCCGCTTAACGAACTA 2888024 35 100.0 35 ................................... ACTGTTTCTACTTGAGTTTCATATCTAATAGAAAT 2887954 35 100.0 35 ................................... TTGCCAGAATATAAAAGACTAAAATGGCTTCCGGA 2887884 35 100.0 36 ................................... AATAAAGCTTTTACTTTTGCTCTTTCCAATGATGGT 2887813 35 100.0 40 ................................... ACCCAAAACAGATAACAACTGTCTAGTGGTACATCTACAG 2887738 35 100.0 36 ................................... TTTATGAGAGAACAGGATTTAAAGCTATAGTTCAAG 2887667 35 100.0 44 ................................... GATCAGCAATAATAAACTCATGTTGATCTAAGTATTTACAAAAT 2887588 35 100.0 41 ................................... CTATTACTTGGTTTTTTAATGATTAGACACATAGTTATAGG 2887512 35 100.0 40 ................................... GTCACGTGTCTGCTTGATTAGTACTGTTATTATTATTATT 2887437 35 100.0 38 ................................... CAATTGCTAATGTATTATTTGAAACAGCTATTGCTTTA 2887364 35 100.0 38 ................................... GACGACGAGTAGTTGTTGTAGTAGCAGGAGCAAAAGGT 2887291 35 100.0 37 ................................... TATGTAACTTGTTCTCGACCTCCTGGACGACTCTCTA 2887219 35 100.0 39 ................................... TTCTTTATTCCTTTTCGTAGCTCATCTATACCCTCGTTA 2887145 35 100.0 36 ................................... CTCATCTTTACTATCCAAGTAATTTATTATTTCTTT 2887074 35 100.0 42 ................................... CCGGGTTGGATTTTGTAGTCAAAACTGTGAATCGTCATTTTT 2886997 35 100.0 36 ................................... TAAAAGACAAGCTAAATCTTGGCTACAACGATAATG 2886926 35 100.0 38 ................................... AGCTTACTAGAAAGAAGTTTACATATGCTGTCTGACTA 2886853 35 100.0 36 ................................... TATCCCGCAAGATAATTAACGAGAACCAAGTAATTG 2886782 35 100.0 43 ................................... CCTAACTTCTGACTCTGCGCATGTCTTTATTTTTGTCGTTGAA 2886704 35 100.0 42 ................................... CAGCTTTAGATCTGAAGTCATACTCTAACTCTAAGCCTATAA 2886627 35 100.0 49 ................................... ACGACTGCCAGGTGTTTCATCTGGTGGGAGACGCCAAAGTTGAGCAGTA 2886543 35 100.0 43 ................................... CCATCTTCAAAAATGGAATATGGGATTTTGGATATACAACAAT 2886465 35 100.0 45 ................................... TTGCACTTTGAGGGTTCCTGAGCCTGGAACCACGCCAATAAAAAC 2886385 35 100.0 39 ................................... ACCAAGGATGCGTCTATTTTGAAGTATGCTAATGTAGCA 2886311 35 100.0 38 ................................... TGCGGGCCCGCTGGGTGGTGCCAGGCACCGAAATGTAT 2886238 35 100.0 41 ................................... ATCCAAAGCTTTACTACTGCGATAAGAGTCGTGGGCTAAAT 2886162 35 97.1 39 ...........................G....... AATAGCTTGCGCTAGTTCACGATCTGCTTGACGGCTATT 2886088 35 94.3 0 ...............T....G.............. | ========== ====== ====== ====== =================================== ================================================= ================== 58 35 99.9 39 CTTTCAAGCCCATTTCCCCGCAAGGGGACTGAAAC # Left flank : CCGCGCCCCTCCCCCCCGGCACCCTCGTTCACCTCACCATCCACCCCGCCGCCCTGAAACTGTTCCCCACCACAGAGGACGTGGTAGATGGAGCAAAGGGGCGATCGCTGCCCGTCGCTTGAAGAAAAAACGAAGAACGAAGAGGGAAAAACGAAGAACGAAGAACGAAGAACGAAGAACGAAGAACGAAGAACGAAGAACGAAGAACGAAAACCCGCTCTTCCGTCTTCCCTCTTTGTTCTTCCGTTTAACGTTTCTTTCATTGACTTTTCTGGCGACAGTCTCCTATGATGCGGGTATGGATACGTCATATTCCCATCTCGCCTGAACCTTGAAAGCCGCATAACTTCGTTGACCAGCGTTGATGCCTTGTTCAGTGGGCAACTCAGACGCTAGAAAGCTAAAGTTTTAAGAAGGAAAATTCATTTTTAGACTCCAAAAACGACCACCATCGATTTCTGCTTACGAGGCATTGCCAGGAGCAGGTTTCAGACGGTACT # Right flank : GTTTGGGAAAAAAGAAGAGTGAAAAACGAAGAGCGAAAAGTGAAGAACAAAGAACGAAAAATTGCTTTTCCCTTACACAGAAAACCGAAAAATCGTTAGTGTCTCAATTTATTCGCCACTCTCAAAATGACCAATCAAGAGCAACCATGCTGTAAGGGTTTCAGCGGTTGTCAGATCGAGGTGGCGAAAAACTAAGGACACGAACAAAAATGAAGAACGAAAAACGAAAAATCGCTTTTCCCTTGCACAGAGAACCGAAAAATCCGTTCTTCTCCCGTAAAGAAAAAATGAAAAACGAAGAACGAAGAACGAAAAACGAAAAATCGCTTTTCCCTTGCACAGAGAACCGAAAAATCCGTTCTTCTCCCGTAAAGAAAAAAATGAAAAACGAAGAACGAAAACCGAAGATCTGCCCTTCCCTCTTCGTTCTTCTATTCTTCGTTCTTCGTTCTTCGTTCTTCCCTCTTCCTTCTTCCTTCTTCGTTTTTCTCCTCGCCGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAAGCCCATTTCCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA // Array 4 3622791-3636701 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP070366.1 Thermoleptolyngbya sp. PKUAC-SCTB121 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================================================================================================================================== ================== 3622791 35 100.0 46 ................................... TAGCTTTTGCTAGGAAATATTGCCCGGCACATTTAAACCCAGGCAA 3622872 35 100.0 39 ................................... GCAAGTCTATATTTAACTGCTGATTTTCTAACTCTAAAT 3622946 35 100.0 45 ................................... AAACCAGGGGCAGAAACTTATCTGAGTGAGCTTGCAGAGCCTTAA 3623026 35 100.0 37 ................................... CTATTTCCAGATGGCAAGGAGATCATTGTTACTGATT 3623098 35 100.0 42 ................................... TATACTAGACTTAGAATTATCTATTTCTTGGACTAGTCTTTG 3623175 35 100.0 40 ................................... TAAGTAAGAGTAAGCTTGCCTTTCCCTATCCCCCTAGCTA 3623250 35 100.0 33 ................................... GAAGTAGAAACGGATTCATTACATATGTGCAGT 3623318 35 100.0 37 ................................... TCGGTCTAATAGAATTCAGACTAATCAGATTAGAAGA 3623390 35 100.0 41 ................................... TTCTACCGTGGGATATCTGCAGCTCATAGATACTGCTTCAT 3623466 35 100.0 39 ................................... CTAAAGTGCTAACCTATAGTCGGATCAGAAAGGAGTAGA 3623540 35 100.0 36 ................................... AAACTTTTTGATATTTAATAGATAGTGCCATATCTT 3623611 35 100.0 43 ................................... TTAAAGTTTGTGTGCTAGAACAAACTTTGGGAGGATAAGCAGA 3623689 35 100.0 34 ................................... TCTACTAGTAGTTTTTTATGCTCGCTAGAAAACT 3623758 35 100.0 35 ................................... GCGGATTTTCGGCGCGTCGTCTGCGCCAAAGCCTA 3623828 35 100.0 43 ................................... ATGTACAGTATTCGGTGTAGTACCTGTTTCCGATGAAATTATG 3623906 35 100.0 43 ................................... GCTTTCGAATACTCCAGGCACGTCATAAATTCGAGAAGAGAGT 3623984 35 100.0 43 ................................... CTACTATGAACTCTTTTGGAGACAAAGCATAATACTCTCTTTT 3624062 35 100.0 35 ................................... CTTAGCTGTTCTTGTGTGATTTCTCTTCTTTGATT 3624132 35 100.0 40 ................................... ATTCCGCTGCCTTGGCTGAAACCTACCCGGCTATCCTGCC 3624207 35 100.0 35 ................................... AATAGTCATATATAGAATATTCTTCTTCCTCATCT 3624277 35 100.0 39 ................................... CACGTGTAGCAGGAGATTCCCCGCTGACAGAATCTTAGC 3624351 35 100.0 36 ................................... CTTCAAAACTACTTAACGTGTATATAATAGCAGAAA 3624422 35 100.0 38 ................................... CAAGGCAACCGCCGAGGGGCGATCGCCTTTGAGTTAGA 3624495 35 100.0 35 ................................... ACTCCTTAGCAGGATATATTACCCAACAGCCGGAA 3624565 35 100.0 37 ................................... GATCTCTACTCCGTAATATTCTATGTCCGGATGTAGA 3624637 35 100.0 37 ................................... AGTAAGTTCTGTATACTCGTTAGAAAGAGTTTTGATT 3624709 35 100.0 41 ................................... GAATATTCCCAGAACTCCAGCAGCGCAATCGTGAGAAAAGA 3624785 35 100.0 38 ................................... TTTTAAACTCTGCTATCAATTATTTTAATGAACTAAAG 3624858 35 100.0 38 ................................... GTGCTGCCGGCGATGGGGTTGGCGGGGGCGCTGGTCAA 3624931 35 100.0 38 ................................... GGCCGTATAGCCCGCATTGGTATTGCGTTCCTTTTTAT 3625004 35 100.0 39 ................................... AAAGTTAGGTTTTCTAACTGTCGCTTGAGGAGGTCTTCC 3625078 35 100.0 40 ................................... ATTACCGTAGATGTTGGTGAGCTAAAAAAAAGCCGATAAA 3625153 35 100.0 37 ................................... AGTAAATTAGTCACATGGATATGCATTCCGCACTGAT 3625225 35 100.0 42 ................................... TTGCGGTTTTTGGGGTATAGATAAATGGCGATCGCCCGTCCA 3625302 35 100.0 41 ................................... ATTACTTTAGAATCAAAGCTGTGAATAGTGATTCTAATTCA 3625378 35 100.0 42 ................................... CAGGAGCTTATCCAGAAGAAGAAGGGGCTTAAAATATATGAG 3625455 35 100.0 37 ................................... GAGAAAGATTTCAAAAAAGACATCAAGCAATTAAAAA 3625527 35 100.0 40 ................................... TTTACTTTCGTGGATGAGATTATAGCTATAGGTATAAACC 3625602 35 100.0 40 ................................... TCTTTATGAATACCGATAAGGCCACTAGTAGCTGCTGCAA 3625677 35 100.0 47 ................................... TGAACTGAGGGCGCTATACAACCAGGTTCGGCAGGAGATCGAGGCAG 3625759 35 100.0 34 ................................... TAGTTTTCATTTTGATCTACTGTTAGAAAAAAAA 3625828 35 100.0 40 ................................... ACCACTATTTCGCGCTCTCCTAACACCCCGTATATGGGAA 3625903 35 100.0 32 ................................... CAGAAATTATTACTCCTCCGTTATTATAAGAG 3625970 35 100.0 32 ................................... TCTCTATACAGTAATAATTTCGTCCGGGCTTT 3626037 35 100.0 39 ................................... ACTTTGTACATTTTTTACCCTCTTTTAGTTAAAGTAAAG 3626111 35 100.0 31 ................................... CATCAGGTCGGCTCCCGGCATAAAAGGCGGG Deletion [3626177] 3626177 35 100.0 34 ................................... TCCTAAATCAATGACTAATCAAAAAGAGATTATT 3626246 35 100.0 31 ................................... ATTAGATGTCTATCTAGACTCTAAGTATGGA Deletion [3626312] 3626312 35 100.0 37 ................................... CGGGTACTGATAATCAATAGCTCCGAAAGTTCCACTA 3626384 35 100.0 41 ................................... TCTGAATCAAGAGTTCCTCCAGAAGCAAAACTACAAATAAA 3626460 35 100.0 37 ................................... TTTCTACGCGGTTTTCGCGGGACGCGGGCTGTTTTAT 3626532 35 100.0 42 ................................... CCTATAGACCGTCTTTATCTGTACTTATAAAAATAGCTAGGT 3626609 35 100.0 41 ................................... TTTCTGCACAACCGGTAAACACATTAAAAGAATCATATGCA 3626685 35 100.0 38 ................................... TAGTAGAGCTAGCCATATTATTCTCCTTGGCAATAAAT 3626758 35 100.0 36 ................................... AAGTAGGTCTAGCCATAAATTAAATGAAATTATGAA 3626829 35 100.0 42 ................................... ACACGGTGGAGCGATTAACCTTCAGTTCGCGGGCGATCGCCA 3626906 35 100.0 42 ................................... TTTTGATAGAAACTATGTGTCTAATTATTTACAGAAAACCAA 3626983 35 100.0 36 ................................... AAATAAGTAGTTATATTATTAGAAGCAAATCAAATA 3627054 35 100.0 34 ................................... ATTGAAGAAACGCAGGTTCTGCAAAATATGGACA 3627123 35 100.0 39 ................................... CATAGGGGTAGTAGTCCAGCAGGCAGCGCCGTACATAGG 3627197 35 100.0 38 ................................... CGTTTTCGTCAATTGCGATCGCGTCAGCGATCTCAGAA 3627270 35 100.0 39 ................................... TTCTTTAGATACCCAAAGATCAATAAACAAATGAGTAGC 3627344 35 100.0 36 ................................... TTTAGACTTGCGGCTGATACTTTTAATTCAAGTATC 3627415 35 100.0 34 ................................... CATACCCATCTGGATCGAGACGAATCGCTTGAGC 3627484 35 100.0 38 ................................... ATATTTCCATAAAGGATACGGGGCCAGAAGCTACTAAT 3627557 35 100.0 35 ................................... TTTCGCACTGGTTCTCAGCAGGCAAGTCGCACCGC 3627627 35 100.0 32 ................................... TGAATGCTTCAAGGTTTAATTCATCCAATATA 3627694 35 100.0 36 ................................... TTGTATCTAAAGAGCTTGCAGAAGGATTCCATCTTG 3627765 35 100.0 36 ................................... ACAAGGCAACTGTCTTTGAATTGGAGCTTAGACAGC 3627836 35 100.0 39 ................................... TTCATTAATATAAAGTTTAACTATTTGATTGCTTAGATT 3627910 35 100.0 42 ................................... ATGGGAAGTACGCCTTCGCACGTCGCAACATGTGTGTGCCAG 3627987 35 100.0 35 ................................... TTTATCTTTGGATGTGTATAGAGAAATTATAAACT 3628057 35 100.0 39 ................................... GCTGCTAATAAAAATGGAGAAACAATATTTGATACTTCC 3628131 35 100.0 41 ................................... CTTCTTCTTTGGTACCATTTGAGGCTGAAGCTGGGCCAATT 3628207 35 100.0 38 ................................... CGATTCCTGATTGGGATCTATTGACTGAAGACCTAGAG 3628280 35 100.0 46 ................................... AGGATATTCTTCACCTTCACGCTTACGTTTACCAGAGTTAACACTG 3628361 35 100.0 43 ................................... TTTGAAGCTCAGTGGGTCAAAAGATCATACGCAAATAGGTATA 3628439 35 100.0 35 ................................... CTAGCTTTCGCTAGAAAATACTCTAATGAATACTT 3628509 35 100.0 35 ................................... TCTTCTGTTGCTAATATGATCATCCCAGGCATAAT 3628579 35 100.0 40 ................................... TGGTATTGATCTTGTTATCCTAACTTTAGGTGATCTAGGA 3628654 35 100.0 37 ................................... GGATGGATTTTGTAGTCAAAACTATGGATGGTCATTT 3628726 35 100.0 35 ................................... CATCCGACTCAAATAAACCTCTTAAGTAAGAGCAT 3628796 35 100.0 39 ................................... AGTAAATAAGTAAATAAGTAAATAAGTATGCTTGCCTTT 3628870 35 100.0 35 ................................... TTTAATGGTGAAGTTATCGATGAGGGTTTAGAAGT 3628940 35 100.0 41 ................................... GTAAGCCCAGGATCATAGCGGCCATTACTAAGGCTGATTAA 3629016 35 100.0 42 ................................... TTAGAGCAAAGTCTGCAAGAGACATCGTTGCATCAAGATTAG 3629093 35 100.0 42 ................................... GATTTTTTAAAAGTGTTACAGGAAAAAATTTAGATAGGTACT 3629170 35 100.0 36 ................................... ATCTGGTCATATAATTCAGTGTGGTAGTCGTAGGGA 3629241 35 100.0 41 ................................... CGGCTTTTTACTCGTGCAGAAAAACGAGTTTGGGGAAAAGC 3629317 35 100.0 42 ................................... TTTAGTACCTAATCCGATAGTTTACTCAACTAGTTTACTCAA 3629394 35 100.0 43 ................................... TGGTAAAACATGGTTAGGTAAAATTTATATAGAAGGAAAAGAA 3629472 35 100.0 42 ................................... TCTACTGTAAATACATAAGCATGATTTACAGGTAAAGGGGTA 3629549 35 100.0 40 ................................... AGAAACTCAATATATGTATATCCAATATTCTGCCTTTAAT 3629624 35 100.0 38 ................................... GCCACTAATCCTTTACCGTTTTCTGATCCAGAAGGTCG 3629697 35 100.0 43 ................................... ATGATCTAAGTAAAAAAGATCATGAGCAGGAATCTGAAGATGA 3629775 35 100.0 38 ................................... TTTATAGCACGCATAGGGATTGCGTTTAACCTGATGAC 3629848 35 100.0 40 ................................... TCTTTATAAGTCATATGACTTAGATCTTCTAGAGTATATA 3629923 35 100.0 37 ................................... CGATGAAGTTGATAGTAGCCAGCAGGCTCTCCGTCTT 3629995 35 100.0 40 ................................... ATTTCGTCATCTCTGCTCATTTCGTCGCCTCTGCTCTAGA 3630070 35 100.0 41 ................................... GCTACGAGTACACTGTCGAAGACATGGAAAGCGCCGAGCTT 3630146 35 100.0 34 ................................... CCTAATATCCCGAATATGGGGAGTGCATCCTCGC 3630215 35 100.0 44 ................................... AAGATTCTGATCCTGTTGGATCACTTGGAAGCAATTGCCATCAC 3630294 35 100.0 35 ................................... GCGATCGCGGACTCGCCCGCACCACATCTTGCGAA 3630364 35 100.0 37 ................................... AATTAACTAGTTTCGATTGATCATAGTTCCAAGAATG 3630436 35 100.0 40 ................................... TTCTGTATAGAAATCTAATTCTTGTTTTATTCCTTTTCTT 3630511 35 100.0 35 ................................... AAGATGGAGTTTTAAAACTCCTCCACTCAATGGTG 3630581 35 100.0 39 ................................... TTTAGCCATGTTACTCTCCTAAATACTAGAGGTGTGCAA 3630655 35 100.0 39 ................................... TTCTTGAATCCTGGTAACAGTTTAATTTCTGACTCCAGG 3630729 35 100.0 39 ................................... TTGAAGGATTTGATCTAGCTTCTGCTATAGCTAGAGAAT 3630803 35 100.0 35 ................................... ATAATACTCCGATTTTTTTGCCGTAGTAGGCGAAT 3630873 35 100.0 35 ................................... GTTAGTTCTAAAACACGAACTTTAAAGGATAAGCT 3630943 35 100.0 41 ................................... TAATCGATTTTATCAATTTTCATGATGTAGTACCGTAATCT 3631019 35 100.0 42 ................................... TTTTTGCCCTCGATTTTTGCAATTAAAACAACGTCACCATTT 3631096 35 100.0 36 ................................... GTAGCTTGGCACGTTGGGATGTCCGATTAATCCCAG 3631167 35 100.0 36 ................................... CTTTTGAGCCTTGTGTAGAGGCTTTATAGGCAGGAT 3631238 35 100.0 37 ................................... TTTAAATCATCTACTCCGTTGTTTAACCTTAAGAAAC 3631310 35 100.0 36 ................................... TCTCAGTATTACTGAGTTAGGTCTATCAAACATAAT 3631381 35 100.0 36 ................................... ACGGAAGGCGGAACGCCTTGCACATAACAATAGTAT 3631452 35 100.0 35 ................................... TTGTTTATCGATAGCAAAATCGTTATTAGCACTAG 3631522 35 100.0 52 ................................... CTCTGAGAAAGTGCCGGATCTCCCCATCGATAAAAGGCACGACTAGCGAACT 3631609 35 100.0 37 ................................... CGTAAAAAGTCTCAGAATGAACAACCTCTGGATATCC 3631681 35 100.0 38 ................................... TAACGCAGTTCCATTATCAGCATTATTGACAACAAAAG 3631754 35 100.0 39 ................................... TGAATATTCCAAGCACGTTAGAAAATCGAACAATGAAGT 3631828 35 100.0 41 ................................... TTTTTTATTATAGACTACAAAGTGACAGATAGAAGTAGACA 3631904 35 100.0 40 ................................... TTTTTATTTAGATGCATGTGCATTCCGGTTCTATTGTGTA 3631979 35 100.0 45 ................................... TTCAGGGCGATTTCTTCCTCAAAACCATCTTCTCCGGTACAGTCT 3632059 35 100.0 32 ................................... ATTCTACCGAAAACGCTACAGTTACAAAAATA 3632126 35 100.0 32 ................................... TTTCAATAAGTTTATCTAAGGCTTCTTGGGGA 3632193 35 100.0 38 ................................... TGTATATTCTTTAGACTCGTTACTGCAGAAAATATTGA 3632266 35 100.0 41 ................................... AGCCTGTGAGCCTACGGGTGTGTAACGTTCAGAGTTTTTTG 3632342 35 100.0 43 ................................... ACACACTGACGCTCGTGCGATCGCCCCGGACTTCCCCCAAATC 3632420 35 100.0 46 ................................... CATGATTAGAGATAGTGTTCCTTTCTTCTGCCATCCGTCCTCACAA 3632501 35 100.0 39 ................................... ATAATTTCCCTCAATTTCCCTCTGATTCGCTATTATGTC 3632575 35 100.0 40 ................................... GTCTTCGACGAGAGTACGAGCACCTTGAACGACAGTCCGA 3632650 35 100.0 39 ................................... AGGCTCCAGAGGGGGCAAAGCATGTAGAACTGTCAGCTT 3632724 35 100.0 37 ................................... TCGATCAGTTGCCCAAATTTATAGATTGGACTCTGCC 3632796 35 100.0 39 ................................... CTGAAGTGGACGAGGCGGCGGGCGATCGCGCTCTGTCGA 3632870 35 100.0 41 ................................... TTGGGGTAGCAACGTGCCACACAGCAGAGAACCGCACCTGG 3632946 35 100.0 35 ................................... TTTGGCAGAGTCAGCGGGCAACAGGGACACCGCTT 3633016 35 100.0 36 ................................... GCGCCAGCAATGGGACAGCCAAGCGGCGGCGTTTGG 3633087 35 100.0 37 ................................... GCAGAAGCTGCTACAGCGAGAAGGAAAACCCAAGCAA 3633159 35 100.0 40 ................................... CCGTTTGAGCGAAGATCGCGTTAACGATCGAGACGTTCAG 3633234 35 100.0 34 ................................... TCTTGCAGCGAGTTTCCCAGTTCGCGCACGGCGT 3633303 35 100.0 41 ................................... CTGCTGAGGAGTAACTGTGATGTCACCCACGTTAGCATCGG 3633379 35 100.0 34 ................................... GAAGTCATGAAAGTTCTCCAAATAGTTGATCCAA 3633448 35 100.0 34 ................................... ACGCTCTGGGGGGTTGAATCGGTTGATGTTCCGA 3633517 35 100.0 38 ................................... TTGGTAGATGAGCGACTCTAGCTCGTCGGGGTAGTCGG 3633590 35 100.0 35 ................................... AAAACCGTAAGGCGGCAAAAGCCCTTATGGATCAA 3633660 35 100.0 46 ................................... TACGACGCAGACGGCGACGTGTGGGATAACGCCAGACTCCCGGCTG 3633741 35 100.0 42 ................................... GGCGGGATATCAGACTGGTTTGCGTTTGACCCGCACGTCCAG 3633818 35 100.0 43 ................................... ATCGCGGCCCGGTTTGGCGGCACCGATGAGATCCGAGATTTAA 3633896 35 100.0 39 ................................... GCTAACCATTGAGGGGCTGATGGCAGACCTGCCCATGCA 3633970 35 100.0 40 ................................... AACTTGTTTAGGTCTGCCGTATTGCGTGATTACTTTCAAG 3634045 35 100.0 44 ................................... ATGCGTGACACCGATTTGGTGCCGTCAGCGATCTCAAGGATCAC 3634124 35 100.0 43 ................................... CGCCAACCCTGGTTTTTGAATGTTGTCCTCGTTATGATTTGAT 3634202 35 100.0 40 ................................... CTTGACGACGGGATGGCCGCCAAAACTCGCGGCAAAGGTG 3634277 35 100.0 37 ................................... AGAGGTGGAGGCAGCCGTCGCCATGCAGGCGTAGACC 3634349 35 100.0 43 ................................... ATCGCTCAGCACACACCGGAAATAACCCGGCGTGCCGTAGTTG 3634427 35 100.0 37 ................................... TTTTCAGAAAAAAGCAAGCCCCCTTCGTTCTAGTCCC 3634499 35 100.0 41 ................................... CCTTGTGGATCACGGTCATCGGTGTTATAAGTTGTCGTAGG 3634575 35 100.0 40 ................................... TCGCGTCGCAGGCGACTCATTAGGCGACTCATTATGATTC 3634650 35 100.0 36 ................................... GCCAGCTATTGGAAAGCCCATCACGGACGGGGCACG 3634721 35 100.0 35 ................................... ACCTTCATTTAGAAGCAAAGAGATGTCCGCGCATA 3634791 35 100.0 42 ................................... GGTTTCGCGGCGATCGCCCCCGTCAAAAGCGGGGCGTTCCCG 3634868 35 100.0 54 ................................... CGCCAACCCTGGTTTTTAATTTTGGTCCTCGTGATAGCGTAAGCGCCATCACGG 3634957 35 100.0 48 ................................... CAGTAGCGGCACACATCAAGATTTTCGCATCCCGGCTTGGGATGCCAA 3635040 35 100.0 40 ................................... TTTTCGCATCCCGGCTTGGGATGCCAGCCCTGGTTTTTTA 3635115 35 100.0 45 ................................... TTTCTTACTCTCGACCCTGCCGCATGAGGTGCGCCAGCCGTTTGT 3635195 35 100.0 37 ................................... GCTGATCCTAGTGGCTCCCGACCGACTATCTGCACAA 3635267 35 100.0 41 ................................... CGACTACGAGCAGGTTGAGGCGCAGTTGAAGCAAGTAAATG 3635343 35 100.0 39 ................................... AGGTCCGCCGTACTGTGCGATCACTTTTAAGTACCTCTG 3635417 35 100.0 38 ................................... CTGAATATCAAACTCAGGGAAATTCGACAGCGTAGCGG 3635490 35 100.0 37 ................................... AAGATGAATGAGGGCGATCGCAAGAAGTTCTTGTCAA 3635562 35 100.0 43 ................................... TTTTGGCAAACTTGTTCAGGTCCGCCGTACTGTGCGATCACTT 3635640 35 100.0 41 ................................... ACACCTCTCGACGTGGCAGCTTTAACCAGCGGGTTATCAAG 3635716 35 100.0 41 ................................... CTACGCATTTTCTGGGCATCGCCCGCGTCTTTGATAGTCCC 3635792 35 100.0 43 ................................... CTGCAGAGATTTCGGTGAACAATCTGGGATGATGATTAAAAAC 3635870 35 100.0 40 ................................... AGCCCACAGCAGAGGGGGCGTTATTGTCCAGCAGAATCAT 3635945 35 100.0 47 ................................... CACCATCTGGTAGTAGTTGAGGACTCCCCAAAGGGCAACGCCTACCA 3636027 35 100.0 39 ................................... TGGTCCTGTCTGTTCAAGATCTTTAAAGCTGTCAGCTTT 3636101 35 100.0 40 ................................... GACAGCGAGAACGCATTGGCTGAAATCGTCGCCGACGAAA 3636176 35 100.0 45 ................................... AATTCATCGCCTAAGCGACCTTCCAGATATTGGCGAATCTCTTGA 3636256 35 100.0 44 ................................... AAACTTTTTGCGTCCGTCACGTTCACGTTGCTGGTGCCGCAGTA 3636335 35 100.0 34 ................................... ACGGAATTCATCGCCTAAGCGACCTTCTAGATAT 3636404 35 100.0 37 ................................... ACTAGGGTGAACCACTCGTCCGGTATTGTCTCCCCCA 3636476 35 94.3 154 .............................G....G CTTTGGGAAAGAACGAAAAACGAAAAACGAAAAAGGAAACTGGATTTGCCCAGAATCGCCTCGCTCTTCGTTCTTCCCTCTTCGTTCTTCCCTCTTCGTTCTTTGTTCTTCCCTCTTCGTTCTTCGTTCTTCCCTCTTCGTTCTTCGTTTTTCC 3636665 35 91.4 0 .....C.......................G....G | C,C [3636668,3636670] ========== ====== ====== ====== =================================== ========================================================================================================================================================== ================== 187 35 99.9 40 CTTTCACCACCACTTCCCCGCAAGGGGACTGAAAC # Left flank : GCTCCACGAAAAAGTCAAACGACAGGTCAAACCCGCTGAAGACAATGTGCGGTTCTACTGGATTGCCGCCGACAGCCTGCCCAAAGCCCTGACGATTGGCAGTTCTCCACCAGAACCGCCGCCCCGAGCCTACATCATCTAATACCTTCAGAGCCAATCTGCTTTAACTCAGGACGCTCCGACACAATCTAGGGCGATCGCCAGATGAGTCATTCATCAGCGATCGCTCTTTTTGCTGCTTTCTTTTTTCTTTATCCTCTAGCGCTTGACTTTTAGAAACCAATCCGGGTTAATGGAGTTCAAGAGGGCATCGTCCAATCTCCACCGATCCTTGAAAGCCGCATAACTTCGTTGACCAGCGTCGATGCCTTATTCAGTGGGCATCTCAGGCGCTAAAAATTCAGGGTCTTAAGAGAGAAAAGTCGTTTTTGAACCCCAAAAATGACCACCGTCGATTTCCGCTCACGAGCCATTGCTGGGAGCAGGTTTCAGACGGCACT # Right flank : GCTTTGGGAAAGAACGAAAAACGAAAAACGAAAAAGGAAACTGGATTTGCCCAGAATCGCCTCGCTCTTCCTTCTTCCCTCTTCCTTCTTCCCTCTTCGTTCTTCGCTCTTCGTTCTTCGCTCTTCGTTCTTCCTTTTTCCTCCTTCCCTCTTCCCTTGGGCACTTTAAACAGGTAAGTGCCTCTCCCTACCGCCATGCCCGAATTTCCCAAAGAAGACCTGCGACAGCGCACGAAAGCCTTTGCCATGCGGATTATCAAGGTGTATACCGCTTTGCCCAAAAGCACCGAAGCTCAGGTTTTGGGTAAACAGCTACTCCGCAGCGGAACCTCTGTCGGTGCCCACTATCGAGAAGCAGTTCGCTCTAGGTCAAAATCTGAGTACATCAGCAAAGTAGGCGTTGGGCTACAAGAACTCGAAGAAGCAATCTACTGGCTAGAGTTATTGACCGACGCTGGGCTGGTTGCTCCCCAAAAAATCAGCAGCCTGATGAACGAGGC # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCACCACCACTTCCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA //