Array 1 69361-73601 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANYI010000016.1 Sutterella wadsworthensis strain 1017h contig_16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================================= ================== 69361 37 100.0 36 ..................................... AGCTGCTCATAAATGCTGAAGATCATACTCTCGCGC 69434 37 100.0 36 ..................................... ATATTGTTTGATCCTTAGGGATAGTCCTAATACATA 69507 37 100.0 34 ..................................... GTAGAGTGCTTTGATGAGAACACACTGAGCGCTA 69578 37 100.0 34 ..................................... GATGAACAGGAGAGGGCTTGACAAGCTCTCTTGA 69649 37 100.0 35 ..................................... GCCTACACATATATACACGTAAAGTAGGCACAGCA 69721 37 100.0 35 ..................................... AAGGCATCTCAAGTCCTTCAGGGATATGCTTCCAC 69793 37 100.0 37 ..................................... TAGACTTACGCCATTCCTTCTGTACCTGAGGATCCTT 69867 37 100.0 37 ..................................... TCTTTGGTCTTTTGACCAGCAAGTCGATAAGCTGTTA 69941 37 100.0 37 ..................................... TAGAATGGACATAGTTAGGAGCGATACCTTGCTTCTG 70015 37 100.0 35 ..................................... TCTATCACGTTGATCAGTGCGCTGAAGTGAGAAGA 70087 37 100.0 39 ..................................... TATTTGTGCAGTTGTCTTAAAGCAGCTAGAGATTGAGCA 70163 37 100.0 37 ..................................... ATCATTATGGGCAATGTACTGAACAATCTCAGGAGCT 70237 37 100.0 38 ..................................... AAAATGATCGCATGGTAATGCGGTCGACCAAGCTTATC 70312 37 100.0 37 ..................................... CACATAAAAAAACGAAGCTGTTGACCAAAACGACTCA 70386 37 100.0 36 ..................................... AAAACGATTGCATGATAATGCGGACGACCAAGCTTA 70459 37 100.0 35 ..................................... TAGCTGTAGATACAAAAAAAGGCGACCAGTTCAGA 70531 37 100.0 36 ..................................... CAGGAGCAACAAAACCAAGCTCTTCGAGCTTAGATT 70604 37 100.0 36 ..................................... CTCATTGAAAATCAAATTGTAAGCGCGGAAAGGCAA 70677 37 100.0 35 ..................................... AAGTCTTTGAGAGTCAAACGAAAAGCCGCAGTAGC 70749 37 100.0 39 ..................................... AAGTCTAAGTACAGGCGCGGGCGCAACCCTGGAGATTCT 70825 37 100.0 35 ..................................... CTATCAGTAAGAATTAGATGGTCTGCAGTGCAAGT 70897 37 100.0 36 ..................................... GGAATTGGTCATGACTTCTGTGAAAAGTACATGACT 70970 37 100.0 35 ..................................... TCAAGGATTTTGGTGTCTGCTGGCTTATCCCTGGC 71042 37 100.0 38 ..................................... TACGGTTCTCATCAGCTAACCATTTATCTTTAGCGTTA 71117 37 100.0 35 ..................................... GCTTATTTTGATAAGTTGTTGGAGCGTTCTGATAT 71189 37 100.0 39 ..................................... CTGCCAACAGGCAAAACGCCGCCTAAGGTATTTGGATTA 71265 37 100.0 36 ..................................... AAAGGCCAAAGCTTCTCAAGCGTTGCACTGCGATAA 71338 37 100.0 37 ..................................... TAACAACTCCTTAGAAGTGATCAACCAAGCCAGGCAC 71412 37 100.0 35 ..................................... AAAAAACTTTAAGGATCATGATTGATTCTCTTCCA 71484 37 100.0 36 ..................................... TATAAAAAAGTCCTCGCACTACGCAAGGACTGATTA 71557 37 100.0 35 ..................................... TCTGATGCTTCCAATTGAAATAAGAAGAGAGAGCA 71629 37 100.0 36 ..................................... ACCGTTTCCGGTACGAATGTTCAGAACCAGACGCTT 71702 37 100.0 38 ..................................... TTCAGTTTGGCGACTTTTCTAATGTCAGTGACTTCCAG 71777 37 100.0 37 ..................................... GGGTAATAACGGTACTCTGCGTAACGCTCTTGATAGC 71851 37 100.0 37 ..................................... ATTCACGAGACTTAGAAAGCCTGCAACCAATACATTG 71925 37 100.0 39 ..................................... TTTACGCCGAAGCGTCCGATCCAATTTGGCGATTTTTCA 72001 37 100.0 35 ..................................... TCTTATTTCGCTCAGTAGCTAAAGCAGAATTCTCA 72073 37 100.0 35 ..................................... TGGTTTCTCGAAGTCCTTCGTCGAGCATGGTTACG 72145 37 100.0 40 ..................................... TTTTCGTGTACGACGATGTGCAGGATTACGAACTTGACAC 72222 37 100.0 61 ..................................... ACTTGCGGCGGCTGCGCAGGCTCGCAGCTCAGGCCCCGGCCGACTATCGCGAGGACATTTG 72320 37 100.0 37 ..................................... TCGACAAGGCTTTTTCTTTAAATGCGAAAACCACCGC 72394 37 100.0 33 ..................................... TGATGCCCGCCGAGCGAAGTGCCTGCACAAGAA 72464 37 100.0 36 ..................................... CCGGCTTTACTACGCAGGTAGCGTCCGGCCTTGCGC 72537 37 100.0 35 ..................................... ATTTTGCACGTCTTGCAGATCAGAAGCTAAGACTT 72609 37 100.0 37 ..................................... CAAACCCATGCCACAGGCTTGGGTCGCTTCCGGCTTA 72683 37 100.0 36 ..................................... AATCGTCTTGTTTGGGACAACTGGCAGAAATTTAAT 72756 37 100.0 36 ..................................... ACGGTTATCCTCGATGAGCCAATCAATAAGCTCATT 72829 37 100.0 34 ..................................... GAAGTTTGGCAGCTGATTGACAAGGCTTGTACAG 72900 37 100.0 37 ..................................... TACCTTTGCTTTAAGGTCGACCTCAGACCACTTAGCA 72974 37 100.0 38 ..................................... TGCACTTTCCGCCCCCAGCCGCGACCGGAAGCATCGCG 73049 37 100.0 35 ..................................... CCCTAAAGCGTAGCGAGCGCCGTAGGAAAACTTCT 73121 37 100.0 36 ..................................... CGAAAGGCCATCAAGGACCACGTCGACCCCGAAGAC 73194 37 100.0 37 ..................................... CAGTGGTTGCACTCGTCGCCGTTGTTGCAGTGGTTGC 73268 37 100.0 37 ..................................... ACGGTTGAAGAAAGCGGCACGACGGAAGCACCGATTT 73342 37 100.0 39 ..................................... TGGGGGGATGAAGAACGCCCTGTCGCCTATATCTCTAAA 73418 37 97.3 37 ..................................T.. TTTGTTTTGCAAACGATCGGAAGAAAACCCCTGCTGG 73492 37 100.0 36 ..................................... GGAGTGCTCGGTGAATCACTTCGCAGGAATGTGTCT 73565 37 78.4 0 ..GA...............A..A..C.A.G......A | ========== ====== ====== ====== ===================================== ============================================================= ================== 58 37 99.6 37 GCAGAGATCATAACGCTACGAGCTATAGCACTGAAAC # Left flank : GGTTTTGTGCTTTATGGCCAGAAAGGTCATACCCTGAAGGTTATAGTAGACATCAAATTACGAGCTGAAGTTCTTACTGTGGCAAATCTAATAAGAGAAGCCTGTAAAAAGGCTATCGTGCCTCATACAGCAGCTACGGAATCGCAATGCGCGCAATGTGAGTATCAAAATTTCTGTGCAGATCGATTCTAAGAAGTGAATACTTACTTCTAAGTAAGTAAATGAAAACCTCATTCTTTGGCCTAATCAAAGAATGAGGTTTTATATCAAAATATCCGGATATCTACTACTAGATAGTGGCCGGATTCAATCTTAGCTTTAGGGGATTTCAGCTCACCCGAAGGTGATTTCCTATAGCTCATAGCATTATGATCTCTAATCAGTATCTTACGATGTATTTTCGAAAATTACAAGGTTTTTTTATCAATCTGAGTATTTTCGAAGTATGGCACTCTGCAGATAGTTGCAAAAACCTTATAAATCAATGTGTAAGTTAGGGG # Right flank : ACACAGATTCAACAAATATCACTATTCAAGGCATTGCAGCAATTTCACCTTAAAAGCATGCGAGCGCTCTAGTGTTATAGACACACTCCACTGAAGAAGCCGCGTAGCAACGTCTACGCCAAACCCCCTACAATAGATGCCTCATGTTGATTCTGGAGGCTCCGTCATGGGCAAGCTCTATATGGGTTTCGATGCTGGCACGCAAAGCGTGAAGGTTGCTGTTTACGATGAACAATTTCGCCTGGTCACGAGCCGATCACTGCCCACATCACTCACCTATCCGCAGCCGGGGTGGGTAGAAATGGACGTCAACACCTATCTTGACAACTGCGTGGTTTGTATGGCTGAAACCACGAGTGAACTGCGGCGTTTGGGGTTCGATCCTAAAGACGTCAGTGCCATTATGGGTGACGGCATCATCTGCGGCATTGTCGGGATCGATGAAAACGCGGATCCGGTAACGCCTTACATCAACTACCTCGACAGCCGCACCATGGCTG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGAGATCATAACGCTACGAGCTATAGCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 35958-35085 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANYI010000018.1 Sutterella wadsworthensis strain 1017h contig_18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 35957 36 100.0 36 .................................... TTGTTCAACACTGTTCCTGCGAATCTTGGGAGAGCC 35885 36 100.0 33 .................................... TGCTTGATGGCAGCAGATTCTTCAGGAGTTAAA 35816 36 100.0 33 .................................... ATATCGTGTTAGACAAGAACGTGAAAATCTTGC 35747 36 100.0 34 .................................... CTGCCGAAAAGGCAGACGTTCAGGCGGTTGATGA 35677 36 100.0 34 .................................... TTGGAGGTTTCGTAAAGGCATGTACTGCCCAAGC 35607 36 100.0 33 .................................... GAAGCGTTGTTCAGTACCGTCCCTACGAATCTT 35538 36 100.0 34 .................................... GTATCAGCTAATTGAACAACGATGATCGGTGAAG 35468 36 100.0 33 .................................... ACTCCGGCAGCTCTCGGATGAGTTCGTAAAGAT 35399 36 100.0 32 .................................... AAATCGCAGTTGACTGAACAACCGGGGCAGCG 35331 36 100.0 35 .................................... ATCTCTGTCCGCGCATCCATGCTCAGTACCTTTAC 35260 36 97.2 33 ................A................... GCTGCAAACCAGCTAACCTGCTGGATGCGGTTG 35191 36 97.2 35 ..........A......................... AGCTCACGAACGCTGCCAACGCGACCAATAAGCGT 35120 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================== ================== 13 36 99.6 34 GTCGAAAGACTGCCCTGATTAGAAAGGGATTGCGAC # Left flank : GTTGCGCATCTTTGTGCGCAGAGGAGATTTGATGCACTTCATCATTGCCTACGACGTCACCAACCCGTCACGTCTTCAACGTCTTCACAAGGCTCTCTGCGAGTATGCGTTGCCCATACAGAAAAGTGTCTTTCTGCTCATGGGGAGTGAAGCGCAGTTTGCAAAGTGTTGTCAAAAGGCCGAGCAGATCATCGACTCGTCAAAGGATGATCTTCGGTTCTACGCCCTCCCTGAACGAGGCATCAAAATTGCTCTGGGGCAGGCACCGCTTCCCGATGGCATCTATCTATCCGAGTTTCCGGAGCTCTCTCAGAGCTGCTGAAGCTGAGAACTCCCAAGCTGGATCTGGAGGGATTTCATCCGTAAAATTGGTCAGATCATTGACGGCGGCTTGCTGTAAATATTTGACATCGATCAAATGCATAAAAATTCACTTTTTTGCCCTGATTGGACATTGCCGCATTTAATTGATAAAAATGAAATATTTTCGGAAAAGTAGA # Right flank : CTTTTTTCGCGGTCATCTTCGTCTACGATCTTTTGTCGAAAGACTGCCCTGATGTAGTCCATGACTATGTCCTGCCATCAGGGCAATAACGCTCTTGTTTTACGACCGAGTTGCTGCAGGAATTTCAGCTGGTGCTGACGCCGCCTTGCCGCCAATTTGATTGATATTGGCAGGCCTGATACTTGGAAAGCATGCTTATATGCCCATTCCTTGCATCCGTGCCTCGACGGTTTGATCTCTGCGGGCTAAGCTTGAAGGACTTGTGCTTTCTTTCCGTGGAGTCCGCGCATGCGTTGCTTCAAGCCTTTGAATTCTTCTCCTTCGCTTCTCGTCTGTGCCCTCGCCGGCGCCTTTGCCTGCGCGGCATCGGCCGCTCCGGCAGCCAATGACGTACAAAGCATTTGGCTTGCTCCAACAGGGACTTCACCCTTAAGCGCCAAAGCGCCGCTGCGCATTGAGATTTCCCCGGCGGAAAGTCAATGCCGTGCCGCCTACGGGGA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAAGACTGCCCTGATTAGAAAGGGATTGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //