Array 1 928076-926627 **** Predicted by CRISPRDetect 2.4 *** >NZ_RBMF01000001.1 Rothia sp. HSID18067 NODE_1_length_1165386_cov_111.104807, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================================== ================== 928075 29 100.0 47 ............................. TCCACCGTAACCACCCTATCGCCCGCCGGGGGCGTATACGACGGGGA 927999 29 100.0 32 ............................. CGAGCGGCTACAGGCCGCCGGGTATGACGAAT 927938 29 100.0 32 ............................. ATTTCCAGAGTGTACGAAGCGCGCGGCGCGGG 927877 29 100.0 32 ............................. GTTCGGGTCGCCGTTCGACTCAGACTGAATCT 927816 29 100.0 32 ............................. CAGCGGAAAGGCACGAGCTTACCCTCAAAGTT 927755 29 100.0 32 ............................. GCCATGAAACGCATGGGCGAAATAGCGAAAGG 927694 29 100.0 32 ............................. CGACGTGCCAGCTGTGCTGGACGAATTGGACT 927633 29 100.0 32 ............................. CGGGTCAGCCTCAGACAAAGCCCATGATCACC 927572 29 100.0 32 ............................. TCCCAGGGGCTCGACAACGGCAGCCCCGCACA 927511 29 100.0 32 ............................. CAGGCACCGGGAACATGCACCCAGCTGCTGTT 927450 29 100.0 32 ............................. GAACCCCATTCGACCTGAGTTGCAATTGCCTG 927389 29 100.0 32 ............................. ACCAGCGAGCACTCAACCTTGAAGCCCTCGGG 927328 29 100.0 32 ............................. TTGCCAAAATCCATGATTCTTTGCCTTTCTTT 927267 29 100.0 32 ............................. CGTAAGCGGCAAACCTTGCTGAAGAACATTAG 927206 29 100.0 32 ............................. ACTAGGGTGCGTTCTACCCCGTCGGGTAGGCT 927145 29 100.0 33 ............................. CGCCGCGGCACCGAAGTGAAGCAGGCCCGCGCA 927083 29 100.0 32 ............................. CGATTTGAAAATTCAGGATGGTAGCGATAACA 927022 29 100.0 32 ............................. GGCCCCTCCTTAGCAACAGCCACCCGCTGACA 926961 29 100.0 32 ............................. AACGTTGATATTTGGGGGCCTTTCGCTGAGGG 926900 29 100.0 32 ............................. AGCTTCTTGTGTTGAAAGACCTGCATTCGCAG 926839 29 100.0 32 ............................. ATTGTCTAGCCGTAACCCGCACCGTGTGAAAG 926778 29 100.0 32 ............................. AGTCACCCACCCTCCACGAACGATAACAGCCC 926717 29 100.0 32 ............................. CACCAGGTCATAATAATGTCCTGAAGAGTAAC 926656 29 86.2 0 .........A..C...........G.G.. | T [926629] ========== ====== ====== ====== ============================= =============================================== ================== 24 29 99.4 33 GTGTTCCCCGCATACGTGGGGATGAGCCC # Left flank : GGAATGAACGCGGTGGGGATCAAAAAAGCGGACATAATTACAGTGATGATGAGGGGGAACTATGATTGTGGTTGTCCTTTCAGCTTGCCCTGTTGGCTTACGCGGGGATTTAACACGCTGGCTTCTTGAAATTAGTGCCGGGGTATTCGTAGGAAAGGTGAGCGCCCGCGTGCGTGAGCACCTGTGGAACCGTATTACTACAACGTGTAGTGATGGTAGCGCGCTTATGGTGTATTCGGCTGATAATGAGCAGCGTCTTGAGTTTAAAGTGCACCGTCATCCGTGGGAGCCTGTCGACTTTGAAGGGGTAAAACTTATGATGCGCCCGTCTGCACCGAAAGAGGACCTTGGGCCACGAAAAGGGTGGAGCAAAGCTAGCAGGTATAGGCGTGCTTCCCGACGGCGATAAGCCCAAAAATCGTGTAGGGTTAATACTGGCTTTGGGCTCCAAACTAATTCTAAAACTTGGTGTGTGGGGATAAAACCCCATGTCAGCAAGT # Right flank : GCAGAACAGTCGCAACCGCACGGAAATAATCGTTTTTCCCACAACATGTGGAGATAAACCGACGTTTACTAGGGTATGTACCCTGCGGTTTTTGCGTTCCCCACATATAGACAGTCCGAGCGACTGCTGGCTGGGTATGATGTAGCTCCTCGTATTTTTCTATTCCTTACCTCACTGGTTTTAATAAAATATTTTGCGGATTCCGCCCTCAGCATGTGCTGTGCACCTGCGGGGAGGGGGGTCTATACTCTACAGTTAATAGAGAAGGCTCCTGATCGTTCCCTGCACCCGTAGGGTCTGCTAGAAAACGGCTTGCCTGCCCGAAATTTTTTGGGTGGGTTGGCCGCTTTCTTTTATTTAATTTTCTTTTGCTATGTTTTCTAACCGTCAGCTTCGCGTCTACTGTTTTTTCATGGTCTGCGGTGATAAAAGTAATTTTTTGTGTATTTTCGGTATTCGGTTTGTAAAACCCTGGGAGTTCGCTAAAAATTATGGGTAGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATACGTGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATACGCGGGGATGATCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.40,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //