Array 1 8070-4320 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSAG01000055.1 Prevotella copri strain AF12-50 AF12-50.Scaf55, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 8069 30 100.0 34 .............................. ATCAGATGACCTTTATCGTAGTCTTCCACCTTGA 8005 30 100.0 35 .............................. CAAAATAAGTAACATTAAATAATTAGCAATATGAA 7940 30 100.0 35 .............................. TTCTTTCACTCGCTTACACCATTCGCCGCAGGATT 7875 30 100.0 33 .............................. TCGGTATATCAATCTCGCTTGCTAACGTTGCCC 7812 30 100.0 37 .............................. ATACATGACAAAGAAGGTAGAGAAACCAGTGAGCACA 7745 30 100.0 34 .............................. TAAGCCCTGCCTTTACTTGATGAGTAGCCTTCTT 7681 30 100.0 34 .............................. AAGTTACATATTCAATAAGAGAGGAGGTAACGAA 7617 30 100.0 38 .............................. TAAGGAACTGAAACACGTCTATTAAATTGATGCATACG 7549 30 100.0 34 .............................. ACTCATTAATACGTGAAAGGATGAATGAATCTGA 7485 30 100.0 35 .............................. TTGTCTATAAGTATAATGATCATTGCAAATCTTAT 7420 30 100.0 35 .............................. AATATTTTATGATCCTCAGAGAGGAGCATCTTTTA 7355 30 100.0 36 .............................. AATTAGCTTTCTTGAGTTTCTGCATGTCTTCTGAAT 7289 30 100.0 36 .............................. CTGGGACATCTGGCATGAAGGCAGAACGTTTGAGGT 7223 30 100.0 36 .............................. TCGAGCAAGAAAAGGTACAAACGGAATCTTCGAAAT 7157 30 100.0 36 .............................. GAAGGAGTCTGCCACTGCCAGCTGCACAATCATTCA 7091 30 100.0 35 .............................. ACGGCGCAAACGTTCATTATTCAATACTTCGTACT 7026 30 100.0 35 .............................. GAAGGTTTTACCGTTAACGCTGCAAACTTGCAGCC 6961 30 100.0 36 .............................. TATAATAAGAAATGATCCTAAGTTAACTAGGAAAAA 6895 30 100.0 37 .............................. TGCTATTAATAATGGCATGAGAATTGATGTTTTGCGT 6828 30 100.0 34 .............................. AGAACAAGCACAGAATAATAACGAAGACGTGCAA 6764 30 100.0 34 .............................. GTGCTCAGTCTGAACGTCAGCAAAAAGAAAATTG 6700 30 100.0 36 .............................. CCCCTTTCGGGGTGGCTTAAAACGTAAGCAAAGTTA 6634 30 100.0 35 .............................. GGGAGATAACACCTCCTGGTACAAATGATACGGCA 6569 30 100.0 35 .............................. ACAGAACGATGCTTAATCAAATGTTCGTGAGAAGA 6504 30 100.0 34 .............................. CTATGAATAGCAACCGGAGAAGTGCACTTAATAT 6440 30 100.0 35 .............................. AGCAACAGAGCATTAGCAGCATTGACAGATATTTC 6375 30 100.0 34 .............................. CCGAAAGATGGATTAATGAAATAAGTCGCTGCCC 6311 30 100.0 37 .............................. TGGCTATCTCTACGGCATCCAGCAAAGAGCTAAGTAA 6244 30 100.0 36 .............................. GGGCTTTTATTTGCTGCTTTTTGAGGTCCACTATCT 6178 30 100.0 35 .............................. TTTATCGTGCTAATTGGTACGGAGGCGGTTTTGTC 6113 30 93.3 35 ........T.T................... AACTGATGGATATGCTGATGAAGCATGGTAATCGG 6048 30 93.3 35 ........T.T................... ATAAGCAACCTTTGTGAATCCGTTGAGAAGTTCAA 5983 30 93.3 34 ........T.T................... GAAGATGATTGTTGCGAGTTGATTCGTAGCATCT 5919 30 93.3 36 ........T.T................... AACTGAGCGGTAGGCAAAACACCGTTAAAATAATCA 5853 30 93.3 34 ........T.T................... ACAAGTAGTTGGTGCCAATGCAGTAAAAGCTGCT 5789 30 93.3 36 ........T.T................... AACTGGATAACCGCGAAGAGGCTACTGTGATTGAGT 5723 30 93.3 36 ........T.T................... GTATTCGACCGCATTTCGCTGCCTAAGAAAACGTGG 5657 30 93.3 35 ........T.T................... TGTGGTAGCTGTATTGCTTGCCAAAACCAAAAGCG 5592 30 93.3 35 ........T.T................... AGTATTAATAACGTTGTCCTCCGCAGCCGCAAAAT 5527 30 93.3 35 ........T.T................... GTATCAAAAGAGTGAAACTCAGAATTGGAAGGAGA 5462 30 93.3 36 ........T.T................... GAAATGTCATGAGTATGAATAATAGTTGGAGACTGA 5396 30 93.3 33 ........T.T................... TAACATTCGGTAACTCTTACTGTACTGTTACAA 5333 30 93.3 37 ........T.T................... TGACGATATCTCCGTCCCATTGGCTGCCCTTGGTAAT 5266 30 93.3 36 ........T.T................... GCAAGCGGCATAACTATACACAGAGACAAGACTGGA 5200 30 93.3 36 ........T.T................... AGGAATATACTTCTGCTCCAAAGCAGTGCTTTATCC 5134 30 93.3 36 ........T.T................... TTACCCTGGATGGCACCCATCAGCAAGTTGCTATTC 5068 30 93.3 35 ........T.T................... GAAAATGCTTCTCGCCAAACAAGCCCAGATATACA 5003 30 93.3 33 ........T.T................... AATGATGATGTTATAAGAAACATACAATACGGA 4940 30 93.3 36 ........T.T................... GATGGTGGAGAACTTGGGTGTCCGAACAATCGAGAT 4874 30 93.3 36 ........T.T................... TTATCATCCTTGATTTCTTTTGCCTCAAACTTGGAA 4808 30 93.3 34 ........T.T................... ATGTAGGCTCTACACCTAGCATTATGACCTTTAA 4744 30 93.3 36 ........T.T................... ATGATAAATTTGGCGAGTGTGGTAGCGACTTTTACA 4678 30 93.3 36 ........T.T................... TCAAGGAAGGCACAACCACTGTAGAGGAGACCTTCA 4612 30 93.3 34 ........T.T................... TTCTTATCAGAAGAGAAGGCTGAGAAAGACTGCA 4548 30 93.3 35 ........T.T................... GAAGGACATCAGAGCCACTATCGAAAGCCCTGACA 4483 30 93.3 36 ........T.T................... TTTCATCAGGAGTGAGGCTGAGGCCTTTGTATCTAA 4417 30 93.3 38 ........T.T................... TAGATGCCTGCAACTTCAATATCAAAGGATTCTGTATG 4349 30 93.3 0 ........T.T................... | ========== ====== ====== ====== ============================== ====================================== ================== 58 30 96.8 35 GTTCTAATCGCACCTTTATGGAATTGAAAT # Left flank : CCTTTTAAAATGTATTGGTGATATGTATGTGATTATAGTTTATGATGTTGGTGAGAAGCGAGTAGGCAAAATGTTGAAACTTTGCCGCCAATATTTGTGTTGGATTCAGAACTCAGTTTTGGAGGGAGAATTATCTGAAGCTAAACTTCGGGAATTGCAAATGAAGATGAAAGCTATCATTGATGAATCCGAGGATAGTGTCATTGTTTTCACCAATAAAATAGGGTATAATATGAACAAACAGATTCTTGGAAAAGAAAGAATGTCTACCGATAATTTCTTATAAAGAGTTGTCGATGTGGTTCTATTTTTCCGTTTCTAGGTTCGGAAAAACCTCCAAAAGTGTTCTTTGACTTATTGAAACCTCCATAAATAGGCTGGTTGTCGTAAGGCCGCAGAAAAAATATCTTTAGGCATCGACATTTTTTCTGAAGATTTTTTGTATCTTTGCACCCACAAACCTATTGATTCTTCGAGCATCTATGCCTAAGGATTAACGG # Right flank : ATAAGCGTTTCTTAGAGGAAGATTTAGCTATCAAAAGTCTGATGTAGATTCGTACAAGATTATAGTTGATTTAGCGAATGATTATCAATGAATTAGATGGTTGTTGCATTGTTTTTGATACTAAAAACAGAAACACAAAACTGGACACCCTACCATAGGGATGATCTAGGGCAATTCATCTTTAATGGTTCTGCAGTCCCTGCTGATACAAGTAAAAATCACCATTCAGGGACTGGTCGATTTGTATGGTTGACAATGAGGACAATGAGTCTTTCAGAATCTGGCGATTCTACCAAAGAAATCAGTCTTGAAGAATTGATAGACAATTTCGTAGCTGATGATTTTTCTTCCATTATCAGCAGAGAAATTAGCAAAATCAGTCTATTTTTCTTTATTTAACTCCGAAATTGAGTGGAATATCAGAGAAAATCCATAAATTTGCATCCAAATACAATATTTTGTAAAGAATGGAAGATAGAGAACTATTACAGAAAAGTGCT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:0, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.76, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTAATCGCACCTTTATGGAATTGAAAT # Alternate repeat : GTTCTAATTGTACCTTTATGGAATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //