Array 1 17753-19172 **** Predicted by CRISPRDetect 2.4 *** >NZ_RMVH01000027.1 Macrococcus caseolyticus strain 124B dan_contig_27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 17753 36 100.0 30 .................................... AAAAACAAATGTATTAGCGTTGATGCCATT 17819 36 100.0 30 .................................... ACACTTTGGACTTATTAAGTACACAGTGGT 17885 36 100.0 30 .................................... TATAGAGAAAGTAAGAAAACTTTCCGGAGA 17951 36 100.0 30 .................................... TTTATAATACCTAACTGTTCAAAAAGGAAT 18017 36 100.0 30 .................................... TTCATTTAATACTGCATATGCTTCATTTTG 18083 36 100.0 30 .................................... AATGACAGGGAGTAACAACGTGCAGAATAA 18149 36 100.0 30 .................................... TCTACCACTCGTAAAAAAGTAGATATGACT 18215 36 100.0 30 .................................... AAGAGGTTGGCGAGTTGATAGCATGGAAGC 18281 36 100.0 30 .................................... GTTACTTTAATAACTTCATCAACGTTTTCA 18347 36 100.0 30 .................................... ATCTGTCATTTGCGATAATAAGAATTCTGA 18413 36 100.0 30 .................................... GTTTTTGTACCTCGCACTGCACGAACCTAA 18479 36 100.0 30 .................................... CGTTTACATGGAACTATGAACGTCCAAACG 18545 36 100.0 30 .................................... AGGTAAAACCGCGGGACAAGCTGGCATATT 18611 36 100.0 30 .................................... TGCAGAAGCAAAGAAACGACTGTTGAAACG 18677 36 100.0 29 .................................... TCAATACAAAAGAAACAAGATCATTGTAT 18742 36 100.0 30 .................................... ATTCCAAAAAATGAACTTCATGATCAATGA 18808 36 100.0 30 .................................... CCATCTCGAATATTTCCCTTGCCTTCTGAT 18874 36 100.0 30 .................................... CTACACCTTCAGAATGATAGAGAACATCAC 18940 36 100.0 30 .................................... TGCCGTAGCCAGTGGTAGTGTTAGATTAAC 19006 36 100.0 30 .................................... ATCTTTGAACATTTCTCTCATGTACTCTCT 19072 36 100.0 29 .................................... ATTCCGAAAGATTTCAATAACGTTGAGAT 19137 36 97.2 0 ..............................C..... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 99.9 30 GTTTTAGAACTATGATCTTTTAGAATGAAGTGAAAC # Left flank : TTTTTAAAATAGATGTTCATAATGATTTTAGTCATTTAAGTGCAATACAGGCGAGGAAAGCATGTATTGATTTGATGAAGGAAGAGAAAAAAGAAAATATTCTTTTTCTATTGTTTCCTGAAGCAAATCTGGGTATAAGGGACGTTAAATCCTTTATGGATTTGATTAAGAATTATGGAATGACAACGATCATGGTTACAAATCATCCATATTTTATGGTAGAAGCCGATTCTTTGGCTATGAGCAAGCATAATATGACTTTGTTTGATATTAATCAGGTTAGAGACGAATTTCGATTAATGTTCCCAAACGAAGAGATAGATGAGAACATTGTGAGACAAATAGCTATTAATGAATTTTCTCGACAATACTTTATTAAAAATGAGCGCTATATCAGATTTATTAATGAGTACTAGTCGTGTATAATAAATAATAACTATAAAAACTGTTTCATTCTCACTATAAAGAGTAGTTTACACCGCATAACTTCGTGTTTTGAG # Right flank : CTCGTGTTCTTCTATAATAATGATAATCAGAATACACTCATATTCCTCACACCTATTATTGGGATAGTCGGCACATTCTTCAGTTTCATGATAGAAAAAGGATAGCTAAGAGCATTTATTCTTTTATTAAATATTCTTGTTGCTATCAGTATCGGGTTAGTGATATTTTTGGTACATTAATATTTGGTCTATAGCAGAAAGGTGGAGCTCCATGAATTTGCGTTCAGGTTTAGTAATTTTCTTTTTTATTATTTTCGTTACATCAACAATCTACAATATTTATACAGAAATAATGAGTGACAATATCGCTGATTCATTAGGTGGATTTTATAGCTTATCAGTGCCGATGTTAGTATTAGCACTTTACCCGGAAGGATTAGACAAAACTTCTCGAAGTGTCGGAATGTTTGTATACAGATTACTCATATTTGTTTACGCTATTGTTTTACTTACTTTTATGATTAAGTACAATGCACCGTGGTTCTTATTATTCTTTGAAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAACTATGATCTTTTAGAATGAAGTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //