Array 1 28307-27129 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FJCJ01000024.1 Legionella pneumophila strain 2531STDY5467349, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	====================================	=====================================	==================
     28306	    36	 100.0	    34	....................................	ATCTCATATCCAGCCTCTAAATTTTTTAGTAAAA   	
     28236	    36	 100.0	    34	....................................	CAAGTAAATAACCTCTAAGGTTAATTTTGTATAT   	
     28166	    36	 100.0	    36	....................................	AGAATTAAGCACAAAGTATATAAATTATAAAGACAA 	
     28094	    36	 100.0	    35	....................................	ATCCCGAAAATCAAAATTTAGCATTTCCACGCACA  	
     28023	    36	 100.0	    36	....................................	TAATAGGATTATATGTAGGTAATTTACGATAATGAA 	
     27951	    36	 100.0	    36	....................................	TCGAAAGAAATGATTCGAAGCGCAGCGAATGGGGTC 	
     27879	    36	 100.0	    35	....................................	TTCAAGAGGTATGGGACATCTACATTGCACCAACA  	
     27808	    36	 100.0	    37	....................................	TTTATCCAAGCCAATTCACTCATATCATACAGCCAAT	
     27735	    36	 100.0	    35	....................................	CTATTGGAAAATGTTATAAACGATGTTATATCTGC  	
     27664	    36	 100.0	    36	....................................	AAACTTCTAGCTATCATAGCGAATTCTTTAATACCC 	
     27592	    36	 100.0	    35	....................................	TGTTGTACAGCTTTATTAAGATATCCGGCAGCAGC  	
     27521	    36	 100.0	    36	....................................	TTCGCATTGGTTGTGCCTATGATTGTTGGCAATGTC 	
     27449	    36	 100.0	    35	....................................	TCCTGACCCTTGTACTTTTGGGAATCCATTGCACC  	
     27378	    36	 100.0	    36	....................................	CGGTTCCACCCGATGTTTTAGCTAAAGCTGTTGCTC 	
     27306	    36	 100.0	    35	....................................	GGCTAAATTTCTTGGGGCACTGCCTAATTTATTTC  	
     27235	    36	 100.0	    35	....................................	CTGTCGGCATAACTCTGTATATCTCTGTGTAGGCC  	
     27164	    36	  86.1	     0	......................TT...T.A.....T	|                                    	
==========	======	======	======	====================================	=====================================	==================
        17	    36	  99.2	    35	CAATAATCCCTCATCTAAAAATCCAACCACTGAAAC	                                     	       

# Left flank :   TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCCTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCAGAGGCTATATTATTACTGGTGAAAAGGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGATTGAAATTTGTGCTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTGAAATCGTTATATGCTCGCTATTAAGACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCC
# Right flank :  ACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGCTAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTAGA

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CAATAATCCCTCATCTAAAAATCCAACCACTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:63.89%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [5-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.41   Confidence: MEDIUM] 

# Array family : NA
//