Array 1 28307-27129 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJCJ01000024.1 Legionella pneumophila strain 2531STDY5467349, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 28306 36 100.0 34 .................................... ATCTCATATCCAGCCTCTAAATTTTTTAGTAAAA 28236 36 100.0 34 .................................... CAAGTAAATAACCTCTAAGGTTAATTTTGTATAT 28166 36 100.0 36 .................................... AGAATTAAGCACAAAGTATATAAATTATAAAGACAA 28094 36 100.0 35 .................................... ATCCCGAAAATCAAAATTTAGCATTTCCACGCACA 28023 36 100.0 36 .................................... TAATAGGATTATATGTAGGTAATTTACGATAATGAA 27951 36 100.0 36 .................................... TCGAAAGAAATGATTCGAAGCGCAGCGAATGGGGTC 27879 36 100.0 35 .................................... TTCAAGAGGTATGGGACATCTACATTGCACCAACA 27808 36 100.0 37 .................................... TTTATCCAAGCCAATTCACTCATATCATACAGCCAAT 27735 36 100.0 35 .................................... CTATTGGAAAATGTTATAAACGATGTTATATCTGC 27664 36 100.0 36 .................................... AAACTTCTAGCTATCATAGCGAATTCTTTAATACCC 27592 36 100.0 35 .................................... TGTTGTACAGCTTTATTAAGATATCCGGCAGCAGC 27521 36 100.0 36 .................................... TTCGCATTGGTTGTGCCTATGATTGTTGGCAATGTC 27449 36 100.0 35 .................................... TCCTGACCCTTGTACTTTTGGGAATCCATTGCACC 27378 36 100.0 36 .................................... CGGTTCCACCCGATGTTTTAGCTAAAGCTGTTGCTC 27306 36 100.0 35 .................................... GGCTAAATTTCTTGGGGCACTGCCTAATTTATTTC 27235 36 100.0 35 .................................... CTGTCGGCATAACTCTGTATATCTCTGTGTAGGCC 27164 36 86.1 0 ......................TT...T.A.....T | ========== ====== ====== ====== ==================================== ===================================== ================== 17 36 99.2 35 CAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCCTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCAGAGGCTATATTATTACTGGTGAAAAGGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGATTGAAATTTGTGCTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTGAAATCGTTATATGCTCGCTATTAAGACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCC # Right flank : ACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGCTAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTAGA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //