Array 1 2730832-2731909 **** Predicted by CRISPRDetect 2.4 *** >NZ_LHSI01000001.1 Xanthomonas translucens pv. graminis strain CFBP 2053 Xtg-CFBP2053-G1-Mol001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 2730832 31 100.0 35 ............................... GGCTGCGGTGTGGTTGTATCAACCGGAGTTAGCGG 2730898 31 100.0 36 ............................... CGGTTGTCGTCCACGAGTCGCAGTACGTCCGCAAAA 2730965 31 100.0 35 ............................... TCGCTAGGGGTCACCGTGCGCAGATTCGAGATGGC 2731031 31 100.0 35 ............................... TACGGCATCAACGTGATTGTTGCGGTCGGCCACAA 2731097 31 100.0 34 ............................... GTCTTGGTCGTAGAGGCCGCGAAGCATGTCGTAA 2731162 31 100.0 34 ............................... AACGATCGTGGTGAGGTTGTGACCACACTATACG 2731227 31 100.0 33 ............................... CGCTTCAGCGCCGCGCGGATGCTGGTCTCCAGG 2731291 31 100.0 33 ............................... CCGCTTCCCCGCAGGGTTTTGGGCGCTTGGGGT 2731355 31 100.0 33 ............................... CCGATGGAACCGCAAGCCGCCTAAGATATCCCA 2731419 31 100.0 35 ............................... ATCTCTTGGGTCTCTGGGTTGGCGGGGCCGGTGTG 2731485 31 100.0 34 ............................... GACTTGGCGGTTACGGATACTGCTTTGCTCAATT 2731550 31 100.0 36 ............................... ATTTATGACGGAGAGCGATTTTTTCGGCGGCATGAT 2731617 31 100.0 34 ............................... GCGCAAACTCTGCCGGCTCAAGCACAAGCATGTG 2731682 31 100.0 34 ............................... TTTCTGGCTATCAGCTGCGCGGCCTGCAAGCGCG 2731747 31 100.0 35 ............................... GGCACCAAAGATCCTTGCGGCACAAGCTTTAGCGG 2731813 31 96.8 34 ....................C.......... GCGTTGGCAGTTCGTCGCGCTGGTGAGGTTTAAG 2731878 31 87.1 0 .....T.........A.C.......G..... | C [2731903] ========== ====== ====== ====== =============================== ==================================== ================== 17 31 99.1 34 GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Left flank : TGAAAAGGCCGCCGCGCCATGATGGTTTTGGTCAGCTACGATGTCAGCACGAGCTCCCCCGGCGGCGAAAAGCGACTGCGCAAAGTCGCCAAAGCCTGCCGTGATCTCGGCCAACGCGTGCAATTTTCGGTCTTCGAAATCGAAGTGGACCCTGCACAATGGGCCGCATTGCGGCAGCGCTTATGCGACCTGATCGATCCGGGCGTCGACAGCCTTCGCTTCTATCAGCTCGGCGCGAAATGGGAAGCACGCGTGGAGCACGTCGGCGCCAAGCCCAGCCTTGACCTCAAAGGCCCACTGATCTTCTGACGCGAACCGCAAGCGACCGGGGAAAGCCCGGCAGGTTCGCGCAACAAACCAAGTCATTGATTTAAAATAAAAACATCAACCTCTTCCACTTGCTGGTATGTCCGCGGAAGCCGAATTCGATTGCGTCTCCTAAGGGTTCCGCAAAAGTGCGGACTTTTTCCCAACACCCATCAGCACTTATGCTTAGGGCG # Right flank : CTGACTTGGCGACGCTGTGTCGTTCTATCGCCTTTGCCCACAAAAAAAGGCGCAGTCTCGCGACTGCGCCCAGCGTGCCGCGCCGGCCGGGAGAGAGTCGGCTGGCGCGATCCGTGACTGCGGTGTCCCTAGCGGGACGCGATGCGCATCACTTGACTTCGAATTCCTGCACCGTTCCGGCCGGCTGGCCGTTCACGGTGACCTCGGCCTTGTACTTGCCGGCCGGCCAGCCCTTGGCGTTGGTGAAGGAGATATTGGTGGTTTCCGCACCGGCCGTGGTCAGCGTCGCGTTCTGCTCGCCGGCGGTCTGGCCGTCCTGGAACAGCAGCTTGGCGCCGACAGCGGTGTTGGTGGAGGAACCCTCGGTCTTCACCGAGACGATGATGGTGTCCTTGCTGCTCAACGTGCTCAGCGGCGCCACCGTCTTGTCGGCGCCCGCACTGTTGCCCACGGTCACCGAGGCGACCGTCACCGTGCCGGCAGTGGCCGCGGCCGGCGCC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.30,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //