Array 1 420775-421150 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWUJ01000011.1 Paenibacillus sp. MAEPY1 contig11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 420775 33 100.0 35 ................................. CTTCTTCGGCAGTCGCTTGACCACTCTCTCAATCC 420843 33 100.0 35 ................................. TCATCGCCTGCTGAGACACCTCAAGTGGTGCCTGA 420911 33 100.0 35 ................................. CGCTTTGGTGTAGGCAGCAAAAATAGCCGGATCAT 420979 33 100.0 37 ................................. TTCCGGAAGATTAATTCTCAACGGTCTGGAGACACCA 421049 33 97.0 36 .........C....................... GGCTAAGCCGAAACGATCCGTTTACGAAGATCGAGG 421118 33 93.9 0 .........C...........T........... | ========== ====== ====== ====== ================================= ===================================== ================== 6 33 98.5 36 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : GCAGAATGCATTCAGGAAGTGAGAGCGCTGAACCCGGATGGTGTTCTGATTGGCAGCGGTGGACTATATAACGGTGTGGATGCAGCCAAAGCACTTGCGCTTGGTGCGGATCTGGCCGGGTTTGGGCGCTCTTTGCTCGAATCCGCAGTAGCTTCGGAAGAAGCGCTGGATCAGCGGCTGGAACAGGTTGAGTTCGAGCTACGTACGGTCATGTTCGGGATTGGCGCAGGGCGGATCGAGGATTTGCAGGGTACGCCACGTCTGGTGCAACGGCCTTAGATTGAGGGTTGAAATAGAGGTGCGAACCCTAAGCTCACACGATTTCCCTGGGGGATTCGCACCTCGAAGTTTGTCGTAAATGACTTTTTTTGTGCCCTTTTGGCAACACCAATGTTCAATTTAGGCTGTTTTTTATCATAAATGTAAATAAGATTTGTTGTAATTATTGGATACACGTAATAATGTCTAAATTTTGCGACTTTATTACGTGTGTTTTCGCT # Right flank : TGAAACAATCGACGATATCATCGAATATTATCGCAGTCGCAATCCGTATGGTGCACCAATATAATTAAACTCTTAAAGCGCTATACATTTCTCATGCTTTTTTTTACGTAATCAAAAGTCAGTAGTAACACCAAAAAACCGTCCAAAGTAATAATGGACGGTTTTTTGGTTTCTCTTTGAAAGTAGAAGGTGAACTATATAGCCCAGTCTGTTTTTTTCCCCTTATCGTCATCCGGTATGTACGTTAACACATCTGAAAGAGTATAGTCATTCCCTGTCATTGCCCCGAAGAGTGTTCACGATATTATTTAAGGTATCTAAATCAAGCCTTTTTGTTTTTCCTTCGCACAAATCATATGTAGCCTAATCATATTTTTATAGACATAGCTAATTCCACCTTTCACTTTAATCATAGCCTAGGGTTAATCCTGACTGAGCATATTACAGGAAATGCAAAAGAGATGTTGGAGTTAATTGTGGATACATTGAGTGGAATGGAT # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 1 49252-49082 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWUJ01000022.1 Paenibacillus sp. MAEPY1 contig22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== =================================== ================== 49251 34 97.1 33 T................................. TCCAGTGCAAATCTCACTGAGTACATCAAGCGC 49184 34 100.0 35 .................................. CATTGGTTGACACCGTAGTCTGTCAGTTGGTTGTA 49115 34 100.0 0 .................................. | ========== ====== ====== ====== ================================== =================================== ================== 3 34 99.0 34 GGTCGCACTCCGTATGGAATGCGTGGATTGAAAT # Left flank : TGCAGCCCGACATTCTGCTGTTCGACGAGCCGACCTCGGCACTTGATCCCGAGCTGACGGGGGAAGTACTGCGCGTCATCAAGCAGCTGGCGCAAGAGAATATGACGATGATGATCGTCACTCATGAGATGAGCTTTGCCCGCGATGTCGCGGATCGCGTCTTCTTCATGGATAACGGTGAAATTGCCGAGGCGGGACCTCCGGAACAGATCTTTGGCAATCCGAAACTTTCGCGTACGCGTACGTTTTTGCAGCGGGTGGAAGTGGAAGGGTAGAAAGTGGTTGGGAAAGTATGCAGGTGCGAATGCCAAGCTCACATGAAATCCCCGGGAGATTCGCACCTCAAAATTTGTCGAAAGGGTCCTATTTGTGACCTTTTGGCAATAGATTACTTGAATATAATGGGTTTCGTATATTAAACTAAATATAGTAAATGACAATATGACCGAAAACACGTAATTAGTATATATACATATGCTGTTGTTACGTGTTTTTTTCGC # Right flank : TACTTCAGAGCAGTAGTCGATGATATTTCTGAAGATACAAGCAGACGTTGCATGTCCCCTCTGTCTACACAAATATGCCCGTTCAGGTCTTTGTTATTATAAACACAATAATAAATATATAAAATTTATTACATATGGATATATTTGACATTATTTATAAGTATGTGTATGATTATTTCATACCAAATAAAGGAGTTGTTTGAATTATGAGGATGTTGAAAAACAAATTTTCTATCATTATGTTGGTGTCAGCAATGTTTTTTAGTTTAGTTGGTAGTACCTACGCTCAAGCTCAAAACTCTGTAGATGCGAATGGTATGACAAAAGAAGAAGTATTAGTTGCTAATCTGCTTATTGAGCATTTAAAAGTCGATGAAAAAACAGGGTTATTTTATTTCGTTGATGAAGCTCAGTTAAAGGAAACTATACTCAATCAAGCGCCTAATACCAGTTATGAACAGATAAGAAAAGATATTGACCAGGTTAACGGCCTCATTGAA # Questionable array : NO Score: 8.31 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTCGCACTCCGTATGGAATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.80,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.15,4.77 Confidence: MEDIUM] # Array family : NA //