Array 1 13166-13377 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNHJ01000018.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00018.18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 13166 29 100.0 32 ............................. TATTTTTGAGTGTAAGCCGCATTCGCGGCGTC 13227 29 100.0 32 ............................. TGTTCGCCGCGCTCTTCACCGTCTTCTGCTGG 13288 29 100.0 32 ............................. GTAAGAAGATGGTCGAATTTGACTTCGACGCC 13349 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 100.0 32 GCGTTCCCCGCACACGCGGGGATGACCCG # Left flank : GATCCGCAGGAGGGACCATGACGCTGATGGTGGTGACGGTGACCAACGCGCCGCCGCGTCTGCGCGGCCGGCTGGGCGTCTGGCTGCTCGAGGTGCGGGCGGGGGTCTATGTAGGCGACTACTCTACGCGTGTGCGCGAGCGGATCTGGGACCAGGTCTGCGCCTGGATCGATCAGGGCGATGCCGTGATGGTATGGGCCGCGCCGACCGATCAGGGCTTTGACTTCGCCACAGTGGGGACGAACCGGCGAATGCCGGTTGACTACGACGGACTGAAGCTGGTTCGCTTTCTTCCGGCAGATCACCCGAGTCTTGCAAACTCCGCCCCTCGCGGGAAGCGGTAGACCCTTCGCCGATCGGTCTCGACGCGATGCGCGCAACAGCGCGCGTTTGTCGGTCGCGGCGCGGGCCCGCCGCCTCGGGGCCCGCGAACCGGCCGGATCCCCGGTAAGCTCTTTGACAACGGAATAGGCCCGGTAGTACAAGCGTTTGCAGGAAGA # Right flank : TC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCACACGCGGGGATGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2-580 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNHJ01000020.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00020.20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2 29 100.0 32 ............................. ATTGCCCTGTCGCGCGCGCGTGGGCGTTCATG 63 29 100.0 32 ............................. CCCCACAACGTGGAAATCAGCGATCCCTTGAT 124 29 100.0 32 ............................. CCGGACGCTGACGACTACATGCGCTGGACGCT 185 29 100.0 32 ............................. AACGCGCGCTTCTCTCCCCGCACTTCGTGCGC 246 29 100.0 32 ............................. GGAGAGAGCCAGGAACCAGAAGGCGGTCGCAT 307 29 100.0 32 ............................. ACCATTAGGACGATCTGCGACATGAGGTTGGA C [312] 369 29 100.0 32 ............................. ACTGTCCGCGTCCTCGAAGGCATTGCTCAAAT 430 29 100.0 32 ............................. GCGCGCACGATCGCAATTTCGAGACGGCGGAA 491 29 100.0 32 ............................. TATTTCCAGTCGCCGTATGATCCGGTTGGCGC 552 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 10 29 100.0 32 GCGTTCCCCGCACACGCGGGGATGACCCG # Left flank : GG # Right flank : GTATCATGTGGTGGTGGCCAACCCGCCGTATATGCGTTCCCCGCACACGCGGGGATGACCCGCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCACACGCGGGGATGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1502-1652 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNHJ01000020.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00020.20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1502 29 96.6 32 ............................A AGGCATGTTCCGGTGCGATTGCCGAGGTCGGC 1563 29 100.0 32 ............................. CCGCCGCGAGGTCCGGGAATTTCCGCTTGGCG 1624 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 GCGTTCCCCGCACACGCGGGGATGACCCG # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAC # Right flank : GGGGCGAGGCCTGAAGCGCGCGGCGGCGTCGCGATCATCCCCGCCAGAAGGAGCCGGCGCGTCCGCGAGACCGTCGACGGGCACTTCTACGCCCTGCGCAACTGGATCGAGCGGTGCTTCAACCGCCTCAAGAACGCCCGGCGGGCCGCCACCCGCTAAGACAAGACCGCGGCCAGCTTTCTTGGCTTCGTCCACCTCGCCTCAATCCGCCTGTGGGTCAAGGACCCTGTCAACACGGCCTAACCTTCTTTTCCTGTATCGCACGGATAGAAGGTAAGAAAAAACTAAATGGGGTAGGTTCAAGCCTCCAGCAAAACCGTCGCGGTTCAGAAGCAGTTTGAGGCCTCTTCTCTACCAATGGGCGGATCGACCATAACGGCCCCACCGCCGACACCGCTCACTTTGCGGATCATCTTATCGCCACCACCTTTCCAACCTCCGCGCGCCCTTCGAGGAAGGCGGCCCAGGCTTCCATCATGGCGCGCCGTTGCTGCACCATG # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCACACGCGGGGATGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //