Array 1 24129-23169 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QYBO01000002.1 Streptococcus mutans strain UAB-32 NODE_2_length_199804_cov_24.2108, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     24128	    36	 100.0	    30	....................................	TTTCGTATGCGACGACTCCTCGCCCGCGCC	
     24062	    36	 100.0	    30	....................................	CACCCCCAAGCGAGCGACTGCGAAGCGGAA	
     23996	    36	 100.0	    30	....................................	AAAGCAGGGGGATGTCATTATCATAGACCT	
     23930	    36	 100.0	    30	....................................	AGTCACTGTTTGCGACTATATTTTCAAACT	
     23864	    36	 100.0	    30	....................................	AGCCAACGGAGCATACCACTGACCAACCTG	
     23798	    36	 100.0	    30	....................................	CCTGAACTTATTCACGGAGTATTGAGGCAA	
     23732	    36	 100.0	    30	....................................	TGAATTATTGCCAAACTCACCGCGAGGTAC	
     23666	    36	 100.0	    30	....................................	ATAAACTGATTGTAATTAATATAATCTTAT	
     23600	    36	 100.0	    30	....................................	TAATTTATTATCACCTGTTCTGTACTCAAT	
     23534	    36	 100.0	    30	....................................	GTGTTGTTAGTAATCTATCACCTTCAGCAC	
     23468	    36	 100.0	    30	....................................	AATCATTAAGCGTCGGCGCTCAATGGAACC	
     23402	    36	 100.0	    30	....................................	ATACTAAGCAATTGAAAAGAGGAGTAGTTA	
     23336	    36	 100.0	    30	....................................	TGAAAAAGCAAAAGAAGCAGAAGCCATTGA	
     23270	    36	  97.2	    30	...................................T	CGGCATATATAATCCGTAAAGGCGGCACAT	
     23204	    35	  75.0	     0	..........CA.......A.TG..T-.A.T.....	|                             	A [23189]
==========	======	======	======	====================================	==============================	==================
        15	    36	  98.1	    30	GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   AGGAAGAGGAAGGGTATTGGGTTGAATTTCCTGAATTTGGCGGTGGTACGCAAGGGGAAGATTTGGAAGAAGCCATGAAGAACGCTCGTCAGATGTTAGAAAGTGTATTGGCCTCCTATCTAGATGAGGGAATGAAACTGCCTAATCCAAGTGAGATAAGGAAACTATCTGTTGAAGATGGCTTTGCAACTATGATTCAAGCAGATCCTAATCCTTATCTCAAAAATAACAAAGCTATTCGAAAGAATGTTACCGTACCTGAGTGGCTAGTACAATTAGCAGATCGTGATCAAGTGAATTATTCTGAAGTATTAACAAAGGCTTTGGAAAAGAAACTACAATTATAAAACAATAAAATCGCTAGAAAGATTGATTTCTAGCGATTTTTGAGGTATAATATAAGCAATCAAAACCTTTTAAAAAGGAATTATTTGAAGCTGAATTCTAGCTGAGATGAATGGCGCGATTACGAAATGTCGTGACGAAAATTGGTCCACGAG
# Right flank :  GCATTATGCGAAAGATTTTTAAATAAGCAAAAGACACTTGAAGCAATAATTCAAGTGTCTTTTATGGGACTTTCTTTAATTTTTAGGTAATGACCGTTCCGATGACTTCAATTGTATCATCTTCTTTTAAAATGATGTCATCATAATCTGGATTTAATGAGATGAGTCGAATTTCTTTGTTTTTTCGGTAGAGTTTTTTGACATATGCCTCATTATTTACAATAACAACGATAATTTGTCCGTGATGGATAGCTTTAGTCTTTTTAACAAAAATAACGTCACCGTTGTAAAATAAAGGTTCCATACTATTACCATTGACAATAAGAGCAATATCATGTTCTGGAATTGGTATTGGGTATTTAATGGTTTCTTGTTTTTCATGTCCAACCCAGATACCAGTACCAGCTGAAACTTCACCATAAATCTGAATGTTTTCGTATTGACGTCCAAAGGTTTGATACAAATCCTTAGCTTTTATCACATTATCCCAATGAATAATT

# Questionable array : NO	 Score: 6.16
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [11-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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