Array 1 140189-139106 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ACLQ01000019.1 Capnocytophaga gingivalis ATCC 33624 ctg1117755536039, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                              	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	=============================================	===============================	==================
    140188	    45	  97.8	    28	..................................C..........	TGGTAAAACAAATATTGTACATCTTCGC   	
    140115	    45	 100.0	    30	.............................................	CTTTCTTTGTAACCTCAGTTTCCTTATACA 	
    140040	    44	  97.8	    30	...........................-.................	ATCGCCCAAATGCTGATACCCTCAAGCTAA 	
    139966	    45	 100.0	    31	.............................................	ACCTTTCGGCTGTCAAGTCCTACTGAATTAG	
    139890	    45	 100.0	    27	.............................................	AACACGGGCTACGCTTTCCGGTTGGTG    	
    139818	    45	 100.0	    28	.............................................	ATTATTTCATAATCAAATGCTGTATAGT   	
    139745	    45	 100.0	    31	.............................................	GACTATCTAGTATATATTGTTTTTTGCAGTT	
    139669	    45	 100.0	    29	.............................................	TTAACATTACACGCCAAGTACAAGCGAGG  	
    139595	    45	 100.0	    30	.............................................	ATAACATTCAGCCTTATGGAGAATACCCGC 	
    139520	    45	 100.0	    28	.............................................	CTTTCAATCTGCAAGAAAAGTTCGCAGA   	
    139447	    45	 100.0	    30	.............................................	TAAAGAAGTATGGTTTCAAGGAAGATTGGG 	
    139372	    45	 100.0	    29	.............................................	CTCTATACAAAGGAAAAAGGTGGAGATAT  	
    139298	    45	 100.0	    29	.............................................	ACAGATGAAGATCTTACAGGTACGAGAGT  	
    139224	    45	 100.0	    29	.............................................	GTGTTCAGGGAAACCCCAACCCTAATTGG  	
    139150	    45	 100.0	     0	.............................................	|                              	
==========	======	======	======	=============================================	===============================	==================
        15	    45	  99.7	    29	GTTGTGAATTGCTTTCAAATTCGTAACTTTGTGATCTCAAACAAC	                               	       

# Left flank :   GAAGGTTTTTGAATAGTCTACATAGTTTAAATCCAACATAAAATTAGTAGGAGCTGTTTTTTTGTTATAATAGAATTTTTCTCCCTTTTTTATCTTGCATAGAAATACATAATTACCTTTCACTCCTGATATATTTAGTTCATATCTTGGAATTTTTTTAGAGGATCTTTCTATGACTTCTTTTTCAATCATGGAAAGAGTTGGTTGCACATTAAAATCTTTGAGAGTATCAGCTAAAGCAACAAAGTGATAATCATTATTAAATTTTTCAACCTTGGCGAATGGTTTTCCTCCATATAGGATTTTTCCATCTTCATCATAGGCTATATACTCCCCTTCAAAATCACTTACAGAATTATAAGAAGGAGAAAATACGGAGGGAGTACCACCATTACATCCTGCCAAGAATGTAAGAATTAAGCTTAGTTTTAAAATACTTTTCATTTTAATTTGACTTTGCAAAGATACAACTTTTAAAATATTTGTACAAATATTTTAAA
# Right flank :  CTCAATCTTTAAAAAGAGATTGATTGTCTGTTAGTTATCGTAAAAGTTCAAAAAGAAAAAACCTTCTCTTTTATTCTATCAAGGGAATAAAAAGGAAGGTTTTTCGTTTTCTAAAATTTAAAAAAGAGAGAGTTGAATGCACTCCTTTGGAGGAGCTTTTTTCGCCTGACAATAGAAGATTTCTATTCCTTCAAATTGCTTGTCGGTGATAGTCAGTATAGCTACTTTTCCATAAGGAGGTAGCCATTGCTTGACACGGTTGATATGTACCTCGGCATTCTTCTTGCCAAGGGGACATGCCGCTCATCGCAGCTGATAAGGATTACATTATTCTTCATGAGTTCCTGTATCAGCTGGTGAGAGAGGGTAATTTGGTAATGATCAAGCATCAGTAGCCCTATATCTTCTATAGGGACACTGCCTTTTTCTTCTTTGGTTTCAGGGTCAGTAACCTTTAATTGTTTGTCTTTCAGCTTCAAATAAGCTGGGTTACCTATATA

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.00, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTGAATTGCTTTCAAATTCGTAACTTTGTGATCTCAAACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         R [matched GTTGTGAGTTGCTTTCAAATTCGTAACTTTGTGACCTCAAACAAC with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-0.70,-2.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-20] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-83.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,4.87   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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