Array 1 1961-48 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIOUP010000019.1 Schnuerera sp. xch1 NODE_19_length_43218_cov_379.211168, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1960 30 100.0 38 .............................. TCAAGATGGCACTATCGAGGTTAAACAAATTAACAACC 1892 30 100.0 36 .............................. TTCCTGTAGTCCATATGCCGTCTTTATCGATACATA 1826 30 100.0 38 .............................. GTGAAGCTTCAAGAGTATCAGCCACGTCAACATCACAA 1758 30 100.0 37 .............................. TCGATACATACGTCGATATGTGTTCCTTGTGGACATC 1691 30 100.0 37 .............................. AAATCTAGTGTAGGCTTTATCTTTAGTCCTGCTGGTG 1624 30 100.0 36 .............................. GAAGCAGAATATTAAGCCTACAACTAGATGCTTCTA 1558 30 100.0 38 .............................. ACTACAAAATCCGCTTGGACACGAGCGTCGATATTAAA 1490 30 100.0 37 .............................. TATATTTTATAGAATAACACCTTAATCACCTGCCCTA 1423 30 100.0 39 .............................. TGATGAGGATCTAGCCACACTACATAAAATCTATTGCCA 1354 30 100.0 38 .............................. GAAGAAGAATGTAAGGAATGGTTCCTAGAAGAATATTT 1286 30 100.0 37 .............................. GGGAATTCTTTAATTAAATCGTCTTTTATAAAATCGT 1219 30 100.0 36 .............................. GCAACCAAACGTTGTAATTTCAAGGTTCTAAAAAAA 1153 30 100.0 38 .............................. ATTGATATGGCTGATATACAATTAGCAAGAATGATAGA 1085 30 100.0 37 .............................. TATTCCATTTCAATTGATCTTTGATTATTAATATCTA 1018 30 100.0 37 .............................. GCTTCTTCTAAATTGAGATAGGCGGGATTACGCTTCT 951 30 100.0 37 .............................. TTGCTCCTCTATTAGGCATTGTACCAGTTTGTTTAGT 884 30 100.0 37 .............................. TTGAAATAAGCCTTCCGTTACACTCGCTGCTTCTTTG 817 30 100.0 37 .............................. TATACAAGAACCAAAAGATAAAGTTGCTAATATTTTT 750 30 100.0 38 .............................. TTTTTTCGTCTGTTGCATAGTCGTTTGTGTCATACAAA 682 30 100.0 36 .............................. TCCAACCTTCACAACCATCTAAAATGCAAGGATTTG 616 30 100.0 37 .............................. GCTGGATAAAAGATGATGGTTATAAAGAATGGTTTTA 549 30 100.0 37 .............................. CGTCCAGAGGATATAAAGAAAAATGTTCAAGATTTTA 482 30 100.0 37 .............................. CTGTAATTGTCTACACTTTCTATTGCTTCGTCAAAGT 415 30 100.0 39 .............................. TCGCATAAGGGCCAATGGAGAAGGCACTATCTATACAGA 346 30 100.0 36 .............................. TGTAAAAAGGCTATGATATTGATTGTAATTCTAGTA 280 30 100.0 38 .............................. TATGCATAGGCAAACTGGAAACTGCAGAGTAACTATAA 212 30 100.0 38 .............................. ATCGTATAAACTGTAGACACAGTCGTATCAGCTTCTAG 144 30 100.0 37 .............................. TCGTCTCCTAATTCCTCTAAGGCTGTCATGCCGACAT 77 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 29 30 100.0 37 ATATCTAGACTACCTATAAGGAATTGAAAC # Left flank : ATATGATCCATATATTTCAAGATGGTAAAGGGTGTGAAATATTTTGTTTGTAATACTCGTGTATGATATTGGAGAAAAAAGAGTTGCGAAAGTTTTAAAAACTTGTAGAAGATATTTATATTGGATACAAAATTCTGTTTTTGAAGGTGAAATATCTCTTGCTAATTTGGAGAAACTAAAAATTGAATTAAACAGTATAATTAATTTAGAAGAAGATTCAGTTATAATATATCAATTTAGAACAACGAGGTATTCCTCAGTTGAAATAATGGGTATTAAAAAAGGTGGAGAAGATAATTTTCTATAGATATTAGTAAGAAAATTTGTCGTCGACCTTCAGTAGTGTAAAAACTACTGGAGATCGACGACAATTTATTTTTTATAAAAATACTGTTATTAACAGGGTTTGGTAGAAATATATTAATATTTAGTACTATTTGAAGATGATTTTAAAATTTGACAGAATATAAGAAGTGTAGTAATATCAAGGTATTGAATGG # Right flank : CTCGTCTCCTAATTCCTCTAAGGCTGTCATGCCGACATATATCTAGAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATATCTAGACTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 1 32053-31687 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIOUP010000018.1 Schnuerera sp. xch1 NODE_18_length_44137_cov_381.431071, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 32052 30 100.0 38 .............................. TAGAGAACGCCGGAGTAATGGGTGTACCTATCCCAAAG 31984 30 100.0 37 .............................. CGAAAACAAGATTGCTATGATAGATTCCTGCTTCTAT 31917 30 100.0 37 .............................. AGAATAAGAGAAGCTGAACTATGGGGGAATATTGGCA 31850 30 100.0 37 .............................. TAGCTAAACGTGTCAGGCTTTCCTGTTTGAACTGCTA 31783 30 96.7 37 .............................C GTGTGGGAAATAGAAGGAGAGCTAGCAAAAAGGTTCT 31716 30 83.3 0 .......A.C..T............A...C | ========== ====== ====== ====== ============================== ====================================== ================== 6 30 96.7 37 GTTATTAGATTACCTATAAGGAATTGAAAT # Left flank : CTATAAAAGAATTATTAGAGATTAAATCAAGAATAGTAAAAAGGGAAGATGCAAATTATTACAGATATATGGACCTTAATGAGTTTAAGGAAATGAAAGTTCTTCCTGACATATTGAGTTACGATAAAGTTGTTAGAACTCTCGGAAAGACTCACAAAAATAAAGAACAGAATTTCAAAAAATATAGAAATAATAAAAATATAAGAGCAAAGGTTAATAATAGAAAACAAAGCAACAACAAAAAAAGAAAAACTTTTGGAGTTAGTATCGATCTTTCAGATTGGGACAAGAAAAACAAATAAGGAAAATGACATATTCATGTTATCATCGACCCCCAATAGTGTAAAAACCTCTGGGGGTCGACGACATTTAATTATTTGAATGAAATGCGTTAATGGTGAGGGTTAAAAGAAAAAGACAAGAAAAGAAAAGCCTAGAAACCAAGCATCTTATTGTTTGACAAATATTTAAAAACGTAGTAATATCAATGCATAAGATGG # Right flank : TAATATTTATGAATATGTGATCTATTTTTATTTGATGTTTTTCCAAATGTAAAGGAGAGTGGAAATGAATTTGCTGAAACAATTTCCTGATAATATGCAACAATTCTTAATAGAATCATATGGAAATCCCGTATATGTTAATAAGCTTAGCGGAATAAAAGCTGACGGTGGATGTTACCGTATTGCTTTTTCAAGTTTCTCTGTAATAGTAAAACAGATGGTAAAACCACAGGAATACTTATTTTATGTTAAATGTAGACAATTTTTACAGAAATTTTGTAAGAATATTCCGGTCTTATACTGGTCTTGTAATGATGAAAACAGTTATTGGATTGTGATTGAAGATATACCTTATGCTCTTCCAAGGGAAAGGTGGCAGGCTGATGAACAGGTGCTTGAAGCATTGTTTCATTTTCATAGTGAAGCGTGGGAGAAAAGATTGCCTATCGAAAATTTTTACATACCCAAATGGGATAATGAATTAACAGAAGCTGTTTTAG # Questionable array : NO Score: 9.10 # Score Detail : 1:0, 2:3, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTAGATTACCTATAAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 2 44093-43253 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIOUP010000018.1 Schnuerera sp. xch1 NODE_18_length_44137_cov_381.431071, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 44092 30 100.0 37 .............................. TCAATATATCCATATCATAGGTATCCGAAATACATAA 44025 30 100.0 38 .............................. TCGGTCGGTAGTTTGCGTTGCTTGCTTCTAGTATTACA 43957 30 100.0 37 .............................. GTGACTATAACTAATACAGTAGCGGAATAACAATAAA 43890 30 100.0 36 .............................. ATACTTAGGCTAATCAACTGACTTGCTTTGGTTTTG 43824 30 100.0 37 .............................. TATATAGTATAACCATCTTCGCCGTACAAATTGTAAA 43757 30 100.0 37 .............................. CTGGATACACTTTCTCACCTCCTAATATTCAATTAAA 43690 30 100.0 39 .............................. TTTGCAGTCCTTAGCCTACATTTAAATTTATTTTCCCTC 43621 30 100.0 38 .............................. TTTCTATTACATACTCTGTTAAGTTTTTATTATGCTTA 43553 30 100.0 37 .............................. CTAGACCTAGCACATCAAGAGGGTTTGGTTTCAATGG 43486 30 100.0 38 .............................. TTTATACATCCGCGCCAGTGGCATCTACCCATTTTGTG 43418 30 100.0 39 .............................. CGGAATCATGAGAAACACTACATCCGAAGAAGTTAGCAG 43349 30 100.0 37 .............................. TTATCAAGTCCTGCTAATTTAATATATTTTTCAACCG 43282 30 96.7 0 ..........................G... | ========== ====== ====== ====== ============================== ======================================= ================== 13 30 99.7 38 ATATCTAGACTACCTATAAGGAATTGAAAC # Left flank : ATTGAAACTCGTCTCCTAATTCCTCTAAGGCTGTCATGCCGACA # Right flank : ATGCCAATTATTTTCATCATGCGTTCGTTTGCTTCGTTACCAATAGCTATTTTTTATGATTTTGACTTATAATTGTGAATCATATCTAATCTTTATGACCCAAATACAATAGAATACTCCTATAGAACAAGCATGAAAATAGAATTATCTAAATAAATTAGCATGTTTCTTTGTGTTTTGAAAAATTAGAGGTGTAATACGAGAGATGAGAATTATATCAATATTTAGAATGCCTTCAGATGATATTGATATTTAAAAAAAGGGTGTAGTTTTATAACTTGCTCTAAAAATAAGTTAGAGTACGATTATTGTATTTTTCGAGAGTGTACTTATAAAGAGGAGGGGGATTAGATTGAGTAAAAAGATTATTAGTTTTTTAGGTAATGGTAATTATAAAAAAACAAAATATGGATTTACTGATCAAAATGGAATGAAAAAGGTAGTTGAGACCAGTTTTATTCAGGAAGCTATTTCTTCATTAGTTGGGAAGGATGCTGAAT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATATCTAGACTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA //