Array 1 19575-17067 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADQUF010000031.1 Corynebacterium belfantii strain 04-16 NODE_31_length_30402_cov_31.643072, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 19574 29 96.6 32 ............................T CAGAGGGAGGAGGCCTAGTCTTCCCCCAAGCC 19513 29 100.0 32 ............................. CCTCACCCTTAAAGAAGCCGCACACCACTACA 19452 29 96.6 32 ............................G AGCTACGCTAAATTCTCCGTGAGCTGGTCAGA 19391 29 96.6 32 ............................G AGCTACGCTAAATTCTCCGTGAGCTGGTCAGA 19330 29 100.0 32 ............................. GCCCAGAATCTTCAAATCCGATCCAGCGGGGA 19269 29 100.0 7 ............................. GCCCAGA Deletion [19234] 19233 29 82.8 32 A.C...T...AT................. ACAAAAGGAGCCACACCATGCTCAAAGCATAC AAA [19225] 19169 29 100.0 32 ............................. CCCGGTCTGGCAGTCGAATATCGTGAGCGTAT 19108 29 96.6 32 ............................G TCATTTTTACCTTTTCCATGTTTTATGCAGTT 19047 29 100.0 32 ............................. GGACGATCAAGGCCACGAGGTTGAGGCCGGCA 18986 29 96.6 32 ............................G CGAGGCCGGCATCCATTGGCGCGTCATCGAGA 18925 29 100.0 32 ............................. CGCGTTAAACGCTTTTGGGTTGCAGGCTGAGG 18864 29 100.0 32 ............................. TCCGCCTGCTTACGTGCTTCCTCGCGCCGATT 18803 29 100.0 32 ............................. TCATTATGAGTCATTTGCTTCATAGTCGCAAG 18742 29 96.6 32 ............................G GAACCGTAATGAAAATCGCGAAACTCAACATC 18681 29 96.6 32 ............................T CGTGCCAAGAACTTTTGCACGGCAGGTTGAAA 18620 29 96.6 32 ............................G TTTTTGCCCCTAGGGGCTAAAGTTGAATAGTG 18559 29 100.0 32 ............................. TCATTATGAGTCATTTGCTTCATAGTCGCAAG 18498 29 96.6 32 ............................G GAACCGTAATGAAAATCGCGAAACTCAACATC 18437 29 96.6 32 ............................T CGTGCCAAGAACTTTTGCACGGCAGGTTGAAA 18376 29 96.6 32 ............................G TTTTTGCCCCTAGGGGCTAAAGTTGAATAGTG 18315 29 100.0 32 ............................. AAAAGAAGCTATTGCAGCAAGTAATAGACGAG 18254 29 96.6 32 ............................G CGCAATCACCATTTTAAGTCATTTGACTAAAT 18193 29 100.0 32 ............................. TGTGACCTCGCGCAATGGCAAAGTCTGGTACA 18132 29 100.0 32 ............................. TCGAGGCAGCACGCACCAAGGGCGCGGCCAGC 18071 29 96.6 32 ............................G TGTGCGGGCAAACCAGGCAGCGCCGATGTGCT 18010 29 96.6 32 ............................G GCGCGCGTGCCGACCCTGACTTCGTTGTAAAA 17949 29 96.6 32 ............................G CAGGAAATCAGCATGGTTGACCGTCGGACGCT 17888 29 100.0 32 ............................. CATTCGGGCCCGTCGCACTTCCACTTTTTCTT 17827 29 100.0 32 ............................. ACACCCTACCAGCATTATATGCACCATTTTGA 17766 29 96.6 32 ............................G CGACTACCAGCGGGCGAGCTTCCTCGGAGACG 17705 29 100.0 32 ............................. CTTCGATGAAGTAATCGAACGCGAGACCACCC 17644 29 96.6 32 ............................G GACAAGTCAATAATATCATGGCTTCCATTAAA 17583 29 96.6 32 ............................G CGGTGTATTTGTCCATTCCCTTGATGTGTTTT 17522 29 96.6 32 ............................G TGATCTCATATCACGCAGGTTGCCTTGCTTGT 17461 29 96.6 32 ............................G TCGCCCCCACATCGGCTGTCCATTCACCCGAT 17400 29 100.0 32 ............................. CGAGGCCTACTGAGACAAACCCGAGGTCAATT 17339 29 100.0 32 ............................. CTCACTACCGGTGAAACGGATGCGCTTCATGG 17278 29 100.0 32 ............................. ACCACGCCCGATGTCACAACGATGAAAAGCTA 17217 29 96.6 32 ............................G GTCAGGCCCTGTAGGGATCATAGAGACAAAAA 17156 29 100.0 32 ............................. TCTTCGCAGCAGTGACGTTAGGCCCGTGGGGC 17095 29 96.6 0 ............................G | ========== ====== ====== ====== ============================= ================================ ================== 42 29 97.8 31 GTTTTCCCCGCACCAGCGGGGATGAGCCC # Left flank : CTTACTTGGAAAGAAGCTGAGGCATTGGCTGGAAACACAGTGCGTCTGCCAGCCCAAATGACACGTAGAGATTCGGATTTTAATGCCGTTATTGATTCGCTCGAAGCACAAACACCACCAGAATGGCAACGATCCGGTTTGCTTAAAGGCCAAGTTGCGTTGCTTTTCGACGAAAGAGGAGAGGCTCGTGTAGGTCGATTCCTAGTGCGTTATACCAATGAACGTGGATTAGAGGTGGAGGTCTGCCCAAAGGAAGACGCATAAAAGGAAACCCCGCTGGTGCGGGGAAGTATGCCTATGTAAATCTTGTAAAGATATTAAAAAGGCTCATCCCTGATCGCAGGGAACAATGCCAGCCTATGGCTAGAAGAAAAGACTAAGCAAATTTGGGTGAATAGCTGATCCTAAAACAGTAGAAATAAAGATGAAGTAGAAAAATTGCTGAAACAAAGTTATATGTAGTAAGCTCTAACTGTCTCTAAACATGCAGCTTGATAAGG # Right flank : TTTAACAGGGACTTTGAGAACTGGACCGCCGTGATTCCTTGCACTAGCAGGGTGGATGAATTTTTGTTGAAGAACGGGTTTTTGGATCTGTGTTTTTCATTCAGAGGAATCAGTAAATGATGGGTCTACTAAAAGATTTTGAAAAAACTAACTTTTAATATCTAAAGAGTGTATTCTGTGGAGAAAGAGCTTCCTAAGTTGGGAGTTTTAAAACAATCAGGAAGGAGTTGGTGGTGGCTTCGTTACTGGAGATCCGCTGGATTCTGGCTCTTGATACTCAAGGTAACCAGATTGCAGTTGGAATACGAGATATTTTCGCGGGGGAGGTGCAGGTTGCTTATATTCAGGGGGAGTCCCCGGCTCAAGACTATGCTGTGATGCGGCTTTTGCTGGCTATTTTCTGGCGTGCCCATTCCATGGATATCGACATGGACGTGGAACCTTTTGATTTTCTTGAATGGTTTAACAAGATGAGACGTCGTCTTGCTCGAAAAGGGAAA # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.04, 8:1, 9:0.65, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCACCAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.70,-12.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //