Array 1 19351-10059 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAENGN010000008.1 Parapedobacter sp. ISTM3 8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 19350 30 100.0 36 .............................. CGTCGTAGGTCAGACAGTCCGGTATCGGTTAGTGAA 19284 30 100.0 36 .............................. TCGTGTTCCGACGAGCGGCCGCGTCCCAAGCCTCGA 19218 30 100.0 35 .............................. GTAATAGTCTTTAGTCATCGACATCATTTAACCGG 19153 30 100.0 36 .............................. ATGATGAAGCTCGATTCCGTCATTCCTATGAATTTT 19087 30 100.0 35 .............................. TAGTTTGATAGCGGCATGTTGTTGCTCGCATAGTG 19022 30 100.0 36 .............................. TTGTTTGGATCAGTTGACGACTTTAACGCAAAAGTT 18956 30 100.0 36 .............................. TGGCCGGAAGAACTTGAAAATCGCGTAAACAAATTA 18890 30 100.0 36 .............................. TTGATTACACTACAAAGATACAAACTATTTTTAATT 18824 30 100.0 36 .............................. CAGGAACGCACTTCGCAATACGGTTGGACTTGTGGT 18758 30 100.0 36 .............................. ACGGAAGAAGCTACTACGGGCGCGGTTACGTGCAGA 18692 30 100.0 34 .............................. GCCTCAATTGCTTATCCAGTATCTTCGCCTGGTT 18628 30 100.0 36 .............................. TATCCTTATGAATCACCGTGAAGCGCTGGAGATTGT 18562 30 100.0 35 .............................. CAAAGATCGGGTAGACACCCCGGACGGGCCTAGGA 18497 30 100.0 36 .............................. GAAGTACGTGCTTTTGAACAAGACAGGGACAACGTT 18431 30 100.0 35 .............................. TACATACAAGGGCATACGTTCTGAATTGGAAAGGA 18366 30 100.0 36 .............................. ACGGTGGTTCACCTCCACGTCGCTGATGGTACGGAA 18300 30 100.0 36 .............................. CGTACTCTTAGCGAAATACCGCTCACCTTTGTACAA 18234 30 100.0 36 .............................. TGAGTTGCCTCGGAACGAAGTCTGAGCCAGTATATC 18168 30 100.0 36 .............................. TTGAGAAAGGAGACGCACAATGACAGACCTATTCGG 18102 30 100.0 35 .............................. CGGTAGTCTTGCGTGTTGGCCCCATGCAGCACGAG 18037 30 100.0 36 .............................. TGAATTGGAACTCCCGGGAAGTGGTAACCCAAAACT 17971 30 100.0 36 .............................. ACACAACGGAGGACGACCCGTGCAAGCCTACGGGCG 17905 30 100.0 35 .............................. CTTTTTCGAGTACTTCAATGAAGACTTCGAAGGGC 17840 30 100.0 36 .............................. AAGGATGCAAGGCAGGTAGATGTGAAGCGTAACGAG 17774 30 100.0 36 .............................. CAAGGTGAGCCGGGAGAACAAGGGCCGAAGGGAGAT 17708 30 100.0 36 .............................. AACAGAAACATCTCGCAAACCATAAAACGCCCTTAA 17642 30 100.0 35 .............................. AACACTACTCAACCCCGGCAGGCACATTCAACCCA 17577 30 100.0 35 .............................. TTTCATTATGTTTGCAACATGACTACTGTAGAAGT 17512 30 100.0 37 .............................. TTCAGAAATAGTCTTTGAATAAGCACCTTTCACCATG 17445 30 100.0 35 .............................. ATTCCAGCAGTACGTAATGCCCCACGAATGCCCGG 17380 30 100.0 35 .............................. TCCGATGCACGGCTTTTTTTGTGTGGTATGGAGCA 17315 30 100.0 36 .............................. GCACCACATAGACATTAACAGGACGGTAGCGGGGCG 17249 30 100.0 36 .............................. ATGCTTCATAATTATTCCTGTCTCCGTTCAACACGT 17183 30 100.0 35 .............................. ATCAGACTGCGGGGCCTCGTCGATCAATAACTCAA 17118 30 100.0 36 .............................. GCTGGAGGATGCAAGAGCTAAGGCCGAACAAATGGA 17052 30 100.0 35 .............................. ACACCACGGAGGACGATCCGTGTAAACCCGATGGC 16987 30 100.0 36 .............................. GTGGTTGAAGATTCCGTTCCCGCCACTCCGCTAAGA 16921 30 100.0 36 .............................. ATCGGATGAAGACTTTTTATGGACTGACGGTGCCGT 16855 30 100.0 35 .............................. ACAATTCTTGCTGATAGGCTTGTATCTTCCGTCTT 16790 30 100.0 34 .............................. AAATCTACAAGACGGGAAGTTACGTGTTGATGAT 16726 30 100.0 37 .............................. CGGTGTTGGCGTTGTGCGCCCTGATGGCTGACATCAA 16659 30 100.0 34 .............................. AGCGCGTACACCATTTAGCGGACGTGTAAAACCG 16595 30 100.0 36 .............................. ATTGAAAATCAAGGCATTACAAAGGCGGTGCCGGAC 16529 30 100.0 35 .............................. ATGATCCCTACAGGGGTATGGTTATCCCGCGCGAT 16464 30 100.0 34 .............................. AATTTACATAACCCGTTTTACCCGCCAAATCCCG 16400 30 100.0 36 .............................. CCTGTTTTGCATCGTCACTCAATTCATTGAATGAAA 16334 30 100.0 36 .............................. GATAGTTAACCTGAACAGTCGGCCCGATCGGATCGG 16268 30 100.0 36 .............................. AATAAATGGTTATTGGCTCAACATGCCGTTCCGACT 16202 30 100.0 35 .............................. CAAGTAAAACTGCCTTTTTTCAAAAATCAACTCTT 16137 30 100.0 36 .............................. TGCTGGCCGTGCCTGTGTCCGTTTACGGGTGCGGGC 16071 30 100.0 36 .............................. ATATACTTTTTTGCCGCTGTCCACTGCCTGTTTAAT 16005 30 100.0 35 .............................. CCGAAACAGTGAATTGCCCAACGCTGGCAATAGCC 15940 30 100.0 37 .............................. AGGAACGGGATCGATACCCGTTGTAGGTGCGAACTAA 15873 30 100.0 35 .............................. TTCTATGTCAAGGCCGTTCCATTCGGACGTGTCGT 15808 30 100.0 36 .............................. TGAAATCACGTAACATTATAGCCTTCGTTGAAAGTC 15742 30 100.0 37 .............................. CAAACGAAAGTATGCAAATAGGCCGATTAGGCCGCTG 15675 30 100.0 36 .............................. ATAATAGCCAAACATAAGGTTAAGCAAACAGGAATA 15609 30 100.0 37 .............................. TACGCAAGGGCAGCAAGACAACCTATGCCAAGTGGTG 15542 30 100.0 34 .............................. TTACAATACCTCAATTAAAAGTTTCAAATGTTCT 15478 30 100.0 36 .............................. ACGGTTACGGGATTACGACGGCAATCATGCTTATTT 15412 30 100.0 36 .............................. CGATGGACCTGGATGTGCTTACCACACCGGGCCAGC 15346 30 100.0 35 .............................. ATGCTTGTCGGTGAAGGAGAAGCGCTGGCCTACTT 15281 30 100.0 34 .............................. AACGTAGGGGATGTTTTGCAGGTCGGGATACGAA 15217 30 100.0 35 .............................. CTTTTTGGACGAAAAATATTCCGGGTGCACTTTTG 15152 30 100.0 36 .............................. CTCGATCCCTTTCTTACCTCCGATTTTCGGTGTGGA 15086 30 100.0 36 .............................. TATAAATTAGCGTTAATAAAGTCGATAGTCACACAG 15020 30 100.0 36 .............................. CTCAACGCGATATAATGCACTTAAAGCCTAAGCCCA 14954 30 100.0 36 .............................. ATTATACATTCACGTCGGGGGACGTATTCAGCAATT 14888 30 100.0 36 .............................. TTTCGTGACAATTAGAAAGCCCTGACGAGGATCGGA 14822 30 100.0 36 .............................. AAAACACCTATTGCAAGGATGCCAAGGAACGGGATC 14756 30 100.0 37 .............................. TGTACACCCGGTGACTAATCGGCGCTTCTCGGTGATT 14689 30 100.0 37 .............................. ATATGACACGGACTGGTGTGATTATATTGAAAATGTA 14622 30 100.0 35 .............................. AAGCATTGGCTAACCAAAAGCCAATTCCGTTTTAG 14557 30 100.0 36 .............................. TTTAAATTTTAGTTGGCCCCAATAGATATTTTAAGC 14491 30 100.0 36 .............................. AAAGCAAACCGCGTTCATCGCGGATGCCACCTACTA 14425 30 100.0 34 .............................. CGTATTTGAGGTGGAGAGGGACGACCTGTTGTGT 14361 30 100.0 36 .............................. AGTGTTATAAGTTTTTTCATACCCTAACAGTTTTAG 14295 30 100.0 36 .............................. CAAAGATGCAAGCATACGCATATGCGTTGTACTTGC 14229 30 100.0 36 .............................. TTAAGAAGCGGCTGGACGACGAATCTAACCATGCTT 14163 30 100.0 39 .............................. TTTAGCGGACGTGTAAAACCGGCATCTTTTCCGTCCATG 14094 30 100.0 37 .............................. TTTTCGCGAATTATCTCATTGACCAAATCTTCGTAAC 14027 30 100.0 36 .............................. ATGATCCATACAGGGGACTGATCATCCCGCGCGATG 13961 30 100.0 36 .............................. CCCCTTTTTGTCCCGTCCCCTATTCCCGCCACCTAC 13895 30 100.0 35 .............................. TGTTGTTGAGACGAGTTTTCAGCGGCTGCTTTAAT 13830 30 100.0 36 .............................. CCGGATAAATTAGCCATCAGTTGCTGTTCCTGGCGA 13764 30 100.0 37 .............................. ACGGGCATAGCTACTACGGGCGGGGTTACGTGCAAAT 13697 30 100.0 34 .............................. CTATATCGTACACCGGATTGAAGTACTTGATATG 13633 30 100.0 35 .............................. TGAAACGGCCTGCAAATTGGCCGAAAGCGTTGATT 13568 30 100.0 36 .............................. TGCGTATTTATGGAGTTCTAAACCACGCGGGTAAGC 13502 30 100.0 36 .............................. AGGGTTACAACCCTTAGCAGCACTGGCGACAATGTT 13436 30 100.0 36 .............................. CAAACTACTGGTAACAACGGGGGCGTGCACGGTGCC 13370 30 100.0 36 .............................. CGGAACCAAATGACCAAACACAGCCGGGGGTGAACC 13304 30 100.0 35 .............................. CAATGCTGGACACGTCACGTATTTAGGTGAAAAAA 13239 30 100.0 36 .............................. CTCCTATCCCTAAGACAGTCGCGGCCTGAATAAATC 13173 30 100.0 37 .............................. TTTGTGCGAATATCCGCGCGGCCTCGACTGTGTCGAA 13106 30 100.0 36 .............................. TTGCCTAATAAATGCGGATATCTTAACCGCTGAATA 13040 30 100.0 34 .............................. CTTAATGCTTGGGCTGAACCCCTTGTGGGCAATG 12976 30 100.0 36 .............................. ATCACAAAAGATATGCTGCCGCCACCAATACACCCA 12910 30 100.0 36 .............................. ATGCCCGTAACCCGTTTGTCGGATTGTCAGATTGCG 12844 30 100.0 37 .............................. CTATTTCAACCTGCCCATCCAGCCTTTCGAGCACGTC 12777 30 100.0 36 .............................. CATGCTGGATGTGATGCGGAAAGGAGGCCGGAGATG 12711 30 100.0 36 .............................. AATTATAAAGTTGCGAAGCGCCAATTGTGCGACGCG 12645 30 100.0 35 .............................. ATTCGTAGGTGGCGTGAAAAATTTCCGGTTTACAA 12580 30 100.0 36 .............................. GTCGTAGTCCTGGAATATCGTGGTTAGACTGTTCTT 12514 30 100.0 37 .............................. TCCCGAAAGGAAAAGGGATGTGCCGGGGCCGCCTGAG 12447 30 100.0 36 .............................. CCTTACTGTGCATCTGTGCATCTGTGCAGGTGCCCC 12381 30 100.0 35 .............................. AAATAATTTACCTGCTCTATAACTATCATTTTCAT 12316 30 100.0 35 .............................. CGCTTAATGACACAACAGCATCTTTCGGAGCCTTG 12251 30 100.0 34 .............................. TCATGGTGGTCACGCTGGTGCGCTTCCCGTTTAT 12187 30 100.0 34 .............................. GTCATACAGCTGCTGGCTGATGCTGTTGTATATC 12123 30 100.0 35 .............................. GAATATCGCCGCTGTTGTATCGGGCGGGTACACCT 12058 30 100.0 34 .............................. TAGTATAATTTGTGTGCTTTATAAACCATGCCGG 11994 30 100.0 37 .............................. CTATTGCCCCTGATCGCAACCGCAACGCAGCACACAC 11927 30 100.0 37 .............................. TAGCCATGCCCACCGCTATACGCGTCAACGTGCGTTC 11860 30 100.0 36 .............................. TTCCGTTATCCCGATACACCAGCCCAATACCTGCCA 11794 30 100.0 36 .............................. TTTACAGAACGTGATTTTTAAAAACCCCGCATTTTG 11728 30 100.0 36 .............................. TAGTACTCAATGCATAGCCGTGTAGGAGACATAGAG 11662 30 100.0 35 .............................. ATCCTGTGCTAAGTTATCCGCACACCGATCTAATC 11597 30 100.0 37 .............................. CGTAAACGGACACAGACGGTCAATGCATAGCGATATG 11530 30 100.0 36 .............................. TGTAGTGGGATGCTTTAGAATGCTTTCGGCGTCTTA 11464 30 100.0 36 .............................. TAATGTACGAGAACGAGGAGGCTCACTGCTATCTAC 11398 30 100.0 35 .............................. CCTTACCGCCTGCACGCAGCTGGACGCACATAGGG 11333 30 100.0 35 .............................. CGGCATTTTCTCCGCCCGCCCGGAACGGTAATACG 11268 30 100.0 36 .............................. CAAAAACAAAATAAAATTCGTGCCAACCCGCCCGAA 11202 30 100.0 36 .............................. TTTTTTTGTTGTGGTGTCGGGCGTTGTCTCCACCCC 11136 30 100.0 35 .............................. GATATTCATCGACGAGAACCCGCCGTCATCCAAGC 11071 30 100.0 36 .............................. TTTTTTGTTGTGGTGTTGGGCGTTGTCTCCACCCCC 11005 30 100.0 35 .............................. ATCGTAAGGAAATGTCTTTCGAGGATGCCCAGGTA 10940 30 100.0 36 .............................. ATTGAACAATACAAGGAAAACGCGAGACGAAGCAAG 10874 30 100.0 37 .............................. AATGGAGACTCATACTTCACATGATCAGCCGGAGACA 10807 30 100.0 36 .............................. ATATTACTACTTGGAGGGATATAAAGATACTATTAC 10741 30 96.7 34 ..G........................... CATGAGCGTAGAGACTTGCATCCAGACGCTTCTG 10677 30 100.0 34 .............................. CTCCAACCGGCGAAACAGCAAGCATGCAATCCCC 10613 30 100.0 35 .............................. ATTCAAAAGCCGCGAGCTAATAGGCTGGTTAGAAG 10548 30 100.0 36 .............................. TGCAAGGTTTGGAACCTAAATTCAAAAGTCAGATGA 10482 30 100.0 36 .............................. GGAAATATGCCGTAGTCATTGGACAAAAACAAAGCA 10416 30 96.7 37 ..........A................... CGCCGTACCGGTACCGTGAGCACTGTTGCCAGTGACG 10349 30 96.7 34 ..........A................... TCTGTGCAGCCTTCCGGCGCCCTCTTTGTAACTA 10285 30 93.3 36 ..........A........A.......... TGTACAACATCCGGGTTCAACATCTCCGGATCGTAG 10219 30 96.7 36 ..........A................... CGGGCAATAGCAAGATTGGCGACTGGTCAATATCCG 10153 30 96.7 36 ..........A................... TACATAGATGCGGTGGCCGCACAGTGGATCTGGTCA 10087 29 83.3 0 ....-......G....G.C.......G... | ========== ====== ====== ====== ============================== ======================================= ================== 142 30 99.7 36 CCTTTAATCGCACCATACAGGAATTGAAAT # Left flank : ATAAACCTTTTAAGGCACGTTGGTAATGTATGTGATTTTGGTATATGACGTAGGCGAGAAACGTGTAGGAAAAATGCTGAAATTGTGCAGGCGTTACCTGCACTGGATACAAAACTCGGTATTCGAGGGTGAAATCACACCTGTGAAACTAAGGGAATTGCTTGCTTCGGCTAAGAAAATCATGGATATGGAATGTGATAGCATCATTGTATTCAAAAGTCGGGAAGAAAAGTGGTTGGATAAAGAAGTGGTGGGTAAAGAGCGAAATGAGCTGGGAAATTTTCTTTAACAAGTCGTCGATGAAGACGAAAGCAAAAGGTTCTTTGACATCTTGAGCCTTAGTTGGTGCAGAAATTGCTGTGTAGATTGCCGTGAGCAAGGTTGTCGATGCTCTGGGATTTTCTGGTTATTAGGGGTCGACTACTATTTATGTCAATTCTATTGATGTAAATTTCATTATTCGACCCTAAATCGACATATTTGTGCGCCGTTTATTACGG # Right flank : CACGAAAATCGAAAGGTAGATATTGCGGAGCAAGCTGACCTCCTGCGAAGGGCTTTAAATCGGAGGCATCAACTGCTCATGGGCGTTGTATAAGCATGTTATAACGGCGGATGCTGCCCCCTAAGATTTTCAACGGATTGTGTTGCGGAGCATGTTGGCCCCCGGTGGGCGTTCGTAACGGAGCAACTGATCCCTGGGGCTTAGGAAAATCCGGTAGGTTTAGGTTGATTTGTTGGTATGTTTTACCATCAACCATTGAAACCCCTGGCTGAAACCCCTGGCAGGGGAAACCAAGACACACGAGTCAGACTAAACAATCATTACGGCTGCACCGCATCGCCCGTACGCTCAAGATCAGCAAGAACATCGTAAAAAGGCTATCTACGCAAGTTAGCCGAGGGGAAGGAAAGCCACACAGTGTGCAAAATTCAATCTTCGTCTAAATCCTCCTTATATAATATCCATTTTTCATCGGTTTTCGGCGCTTTGCGCATAGGGAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTTAATCGCACCATACAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 1 20297-20065 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAENGN010000013.1 Parapedobacter sp. ISTM3 13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 20296 35 88.9 30 ...........C.CA........-............ TTGTTGAACTTAGATAAGAAAGCAATGTCA 20231 36 100.0 30 .................................... CCCCTCTGTACAGTGCCTTCTCAAGCCAGC 20165 36 100.0 30 .................................... TATTGCGATTCTCATCCCTGAATTTCTGAA 20099 35 83.3 0 ...........C...........G...G.T.-..G. | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 93.0 30 GGTGTTACAGATCACAATTTGAAAGGTATATACAAC # Left flank : TACCGATTCGTGTTTAAGATACCGAAACCTACAAAGAAACCTTATCAGCTACAGTTTCGATAATCGGGCGTGATTGGGCGACCGGTATGTCAATCGTTTTCTGAAAAAATTGGACGATATGGTTGGCAAAATTCAGACGCACCCTTATCTGTTTCATGCTGTACCTGTGAACCCGAGATATAGAAGGTGTGTCATTTCCAAACAAACGTCTCTGGTCTACGAAGTCACCGATTCAAAAATTATACTCCTGTATTTGTTTGACAATCGCCAAGAGCCACTATGGGATTAGGTATTGATTAAGCTTTCGTACATAACAAACGCCCTGTAAGCTCTGTAAAATCTTTGAGGCTGCTTGTACAGCCGCAAGGTGAGGTCAGGTTAACACTCACTGAATACTTTATTCTATTGCGAATTTGCTTATTCGCTAACTTGCCGTAGTGGTGGAAACCAATTTGAAAGGTATATATAATCTTTGGCCCAGCGGTCGGTTTTTGAAACAA # Right flank : AGGCAGCACATCTTTCAGAAGTAATGGAAAATGAACAGGTACTGCTTCAGGCGGCAAAGGTAGCTGTCGTGGAAGGCCAACTGCGCAAGTCTAAATCCCGCTGTGAGATTTTGGGAATTAACCTATTTAAACTGTAAATACAAATAGTCGCTTGTCACTAGTTCTCCGGCTTCGTTATATGAGGTCCAGGGAGATAGCGTAATTTCAATGGTATATCGCCCCGGTTTCAACGCAGATTTCTCCGTGACGCACCAGAAAAACGTGGAAACTCCCTCCAATAGCTGGTCGTCCACTGTTGCTTCGATTTGACAGTCCGGCATTCCGGAATCCGTGCCGAATGCGTCAAACCGCCTGACACCCGAAGACTTGCCATTCGAAAGAGTGCCTAAAGGCTGTCCATTGACAGATAGATTGTTCAGCGTTTTGCCGCTTGCGTTGTGGAAATCGATAGCGATACCGCCCAGTTCGTTTTTCTGGCAACCGGCAAGAAAAAGGGCTGA # Questionable array : NO Score: 2.51 # Score Detail : 1:0, 2:0, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTGTTACAGATCACAATTTGAAAGGTATATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //