Array 1 58-452 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJBP01000176.1 Psychromonas sp. MB-3u-54 contig25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 58 29 100.0 32 ............................. TGGCGGGAAGGATGTTGTTGGAATGTTCGGCG 119 29 100.0 32 ............................. CGTCATGGAAACAGTGTTTTGTACGGCAGTTG 180 29 100.0 32 ............................. TTTTCATCTGTGTTTTTAAATAGTATATGACG 241 29 100.0 32 ............................. TGTAAACGCATTGTAATTTCAGGCTAGACTGA 302 29 100.0 32 ............................. CTATTGAGTTGCCAAAAAATGTTAGAAAAAAA 363 29 100.0 32 ............................. CCGAGCAAGAAGCGAAGGCAGCAGAAGAAACG 424 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 100.0 32 GTGTTCCCCGTGCCTACGGGGATGAACCG # Left flank : TCCCCGTGCCTACGGGGATGAACCGTCGCCATCTCATGTCGCACTTGCTACGTTATTG # Right flank : GCATGTTAGCGGTATTAGTGTCTTTGGACTTAAGTTTGTATTATATATTTATGAGATAATTTCATTATCCCCTTCAATAGAAGGGGTTGATGAAATTATATTGTGTACGCGGACTTATAATAGGATTCTTTACTCTGTGTAGTGCGCAGCGCCTCTGTGGTAGAGCCTTTAAGTTTATTACAAAAAAACAAAAAATATGACTTATGCGAGAAGACGTTAAGCATTTTATTGTGCCTAAAAAAAGAAAACACCGAACGTTTCCACGTTCAGTGTTTTCTCTATCATCAAGATATTCATCAAAATATCCGCTGAGATATCAGTCTAAAATTGCTTAACCAAACAGATTTTTGAGTTTATCGCCTAGTTTATCTTTTACTTTCTCTTCGAGCTTGTTTTTTTGCTCTTCTATTTTTTGTTGAGATTCTTTTTTAAGTTTCTCCTCCAGCCGTTTTTTCTCCATATTAAGCCGCTCTTTTATAGCGCCTTCGGTGTCCAACGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGCCTACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.30,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 42661-42994 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJBP01000125.1 Psychromonas sp. MB-3u-54 contig39, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 42661 29 100.0 32 ............................. CGGTTAAGAAAAAGCAACTGGCGCTCACTAAT 42722 29 100.0 32 ............................. TGATTAATAGTGTTATTTATTCGATCAAATAT 42783 29 100.0 32 ............................. TCACGCCATCAACCGACATTGTACTCTCTAAC 42844 29 100.0 32 ............................. TCTGTTAGGTATTTATCGTCTTTACCGTTATT 42905 29 100.0 32 ............................. TTTGAATGCAAACATAGTCGAATCTGCAAGTG 42966 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 100.0 32 GTGTTCCCCGTGCCTACGGGGATGAACCG # Left flank : GAGGAAGTGTTAGGCGCTGGAGAGATAAAACCACCAGAGCCTTACGAAGATGCACAGCCACCCGCTATTCCTATGCCTGAAACGATAGGCGATGACGGTCATCGTACTGCTTAAAAAGGTATAAATATGTCAATGGTCACAGTGGTAACAGAAGTTGTACCACCTCGTTTGAGGGGGAGATTAGCGGTTTGGTTATTAGAAGTCCGAGCGGGTGTTTATGTAGGTGATGTTTCAGCGCGAGTACGAGAAATGATCTGGTACCAGATTAGTGAACTTGCTGAGAATGGAAATGTTGTTATGGCATGGTCAACCAATACCGAATCTGGATTTGATTTTGTTACTTACGGTGAAAATCGCCGTATGCCGGTTGAGTTAGACGGATTAAGATTGGTAAAATTCAAACCTGAAATCAAAGAAAATTAAAAAGTTTTTGCTCTTTAAAAATCGGTGATTATTGAAGTACTCTATTTATCCTTACAAAACAATAATATATACTTAGA # Right flank : CTATTTATCTGATGCCGATAACTCAGACAGCAGTGTTCCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGCCTACGGGGATGAACCG # Alternate repeat : GTGTTCCCCGTGCCTACGGGGATGAACCGC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.30,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //