Array 1 411170-411783 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZTY01000002.1 Clostridium baratii strain 771-14 contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 411170 29 100.0 35 ............................. GATTTAAAAAATTCATTTTCAGCACAAGTAGGAGG 411234 29 100.0 36 ............................. TAGTAAGTGTAATTACAAATGATTTCGGAAGTAAAA 411299 29 100.0 37 ............................. ACGTTTGGTAAAGGTTGGTGTTACAGAATAAAAGACT 411365 29 100.0 35 ............................. CGGAAACCTTGCATACCTCTCTCGCCTTGTTCCCC 411429 29 100.0 36 ............................. ATTAATTTCTGTACAGTTTCTCTTGTAATAGCAGTA 411494 29 100.0 37 ............................. CTTACAAAAATTTTTTCTGTAAATTCATTTAAATCAG 411560 29 100.0 36 ............................. TTATATCCAGCAACTTGAGCTGAACCACTGAATATT 411625 29 100.0 36 ............................. TTAGAACCCTTATACATATAAACAGTTGGGAATTGT 411690 29 100.0 36 ............................. AACAAATGTAAAGGATTACCATGTTTCTTAAATCTA 411755 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 10 29 100.0 37 GTTTTATATTAACTATGTGGAATGTAAAT # Left flank : GTGAAGAATATAAACCTTTAAAGGCATGGTGGTAAAATGTTTGTTATAATTACTTATGATATAAAAATTGAGAGAATAAATAGAGTTAGAAAACTATTAAGAATGTATTTAACGTGGACTCAAAATTCCGTTTTTGAAGGAAAGATAACAGAGTCTAAGCTTCAAAAATGTTTAAACGAAGTTAATAGCTATATTAATAGGAAAGAAGATTCTATTTATGTATATAGAGTTCAAAATGAAAAAAATATAAGGAAAGATGTTATTGGAGAAGAAAAGAATTTTGATGAATTATTTATTTGATAGTATAATGAAAATATAAAATTGCAGTAAATCGTAAAAATGATTAGATTGAGCAGAAGCCTTAAAAATCAAGGATAGGGGCAAATTTCATACAAATTAAAAAATAAGACTGAAGGTTTACTGCATTTACAGGGATTATTTTTAGAAAAAATAGTTTACAAACGGCTTGAAATGGTCAAAAATTGCTTATCAATTTTGGG # Right flank : TAATGAGAAAATACTGATATTAAATTTTTATTTAGTATCAGTATTTTTGTTGTTTTAAATTGGGATAAAAAATAAATATTCAAAATATAGTAAATTAAATTGTAGATAATGGTATAATTATTTACGAAAACATAGAAAAAATATATTTTTATATGTAAAATTTTAATTTAAAATAAAATTTATAGTAATTATATCCTAAATAGGTCCACAATTATAATTATAATATATTTGTAGAAAAGAAGAGGAGGAGAGAGATGAGATTTAAAGTGGTTTTTAAAAGTAAAAACAAAAAACTTCCTATAGGATATAGGACTTTATTTTCAAGTCTATTTAAAAGTATATTAGAAAAAAGTGATAAAGAATATTTTAAAGAAGTTTATTTTTATGAAGAAAAAAAGAATAAAAAAATTAAAAACTTAAATTTTTCAGTTTATCTTCAAAACTTTAAAATTGGAAGTAATGAGATTGAAGTTGATGGGGATATAATTTTAAATATAACT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [71.7-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 418721-420581 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZTY01000002.1 Clostridium baratii strain 771-14 contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 418721 29 100.0 37 ............................. TGGCATTAGGTAGAATAGACGCTTATAAAAAGAAACC 418787 29 100.0 36 ............................. ATTTCAAACAGCGACAGAAAATCAAGTAGGCAAAGC 418852 29 100.0 38 ............................. AAATAGGAGGTGAGAAAATGAGTAAATGGTGTAATATT 418919 29 100.0 36 ............................. TTGTTATCTAATAACAACAAATGATGGAGAAGAATA 418984 29 100.0 35 ............................. CTTAGTTCAGACCCCTATACGCAATACATGGCTAC 419048 29 100.0 37 ............................. TATGAAATTAAAGATTATCAATGTGTAGAAATAGATG 419114 29 100.0 37 ............................. CCTATCATTAAATTGTTATATTCCATATCAAAAGTCA 419180 29 100.0 36 ............................. TTTGGATTCATATTGTAATATCTAGCATAAGCTTTC 419245 29 100.0 36 ............................. CATCTTTCTGTATGTCCACCTCTTACTGCTATTTTC 419310 29 100.0 38 ............................. TTTAACTATAGGTAAGAATCTAATCCAATTTTCAGGCA 419377 29 100.0 37 ............................. TTCAAGGTGATGAATAGTAAATATACTTTAAAACTTG 419443 29 100.0 37 ............................. AATTGTGGAAAGCCATTTTGTGTGTGAGTTGCAAGTT 419509 29 100.0 37 ............................. TAAATGAAAGGGTAACAGGATCAGAATTTGAAAGTTA 419575 29 100.0 36 ............................. AGGGTTAAAATTGGAGGTTTTATATGTCTAAGGATA 419640 29 100.0 36 ............................. TTGTTTTTAAGTATTTCTCTAATGTGATAATACATA 419705 29 100.0 36 ............................. GACTTCTTAGAAGACGGAGAAAAGTGGATTAATTAT 419770 29 100.0 35 ............................. ATGACCGAGACTGCTAAACTTATGCTTAATTCTAG 419834 29 100.0 37 ............................. ACTATAAGAAACGAGTTCATCAATTCTTTAGTAAACA 419900 29 100.0 36 ............................. AATTCTGAAAATACTCTTCTATTCATTTCTCGCATT 419965 29 100.0 35 ............................. TATTTAATTAAACATTTAAGAAATGCGGGACATAC 420029 29 100.0 36 ............................. AATGTAGCAAAGCTACATAACAAAGCTATTTTATAG 420094 29 100.0 38 ............................. ATAAGTGAAAATATATATAACTTAGTAGGAGAAGTAGG 420161 29 100.0 35 ............................. AGGATTAAATGATTTTACTAAGACATTATTTACAT 420225 29 100.0 36 ............................. TAGCATTTTGAGATTTTACTCCTTCTTCAAATAGCT 420290 29 100.0 37 ............................. AAAAGATTTAAGATTAGAAAGTGGATTAAAGGTTAAG 420356 29 100.0 37 ............................. AGGCAATTTTAACTTTATTCTTAGAGGGGAAGATGGC 420422 29 96.6 36 ...................T......... AGACCTTGAATAAATGCAATTATTGCTTGTGAAGCA 420487 29 100.0 37 ............................. TTTAAAGATGGAGGTCTTAAAGATAAGCAAGTAAGAA 420553 29 89.7 0 ...................TG.G...... | ========== ====== ====== ====== ============================= ====================================== ================== 29 29 99.5 36 GTTTTATCTTAACTATGAGGAATGTAAAT # Left flank : ACTTTAAAAGATAGCTTGAAAAATGAAATAGATTATTCAAAAAGAATAAAATTAAAGGATGAATTAATGCAATATACGTTATCTATAAGTAAAAAGGAGTTTGAAGGAAAAATAAGAAAAGGAGCGAAATATGATGATTTCAAAGTAAATGATTATGAATCATTTGTTATATCATATTTTGATTATTCATTTGAAAAGGGTTTAGAAACGGATAAATTTAAAAATGGAAATGAATTTACGGATAATCAATTTTTATAATTAGTATAAACTTGGTAGATTAAATGATAAATTAATGATAATATTATAATAATATATTAATTTGCAGTGAATCTAAAAATAATAAGAAGCTAGCTAAAGCTAGTAAAATCAATAAGTGAGGAACACATTTGCTTGGTAGGGAAATTTAATACTAACGGTTTACTGCAAAAGAGATTAGAATAAATGAAAAATGATACTTGCAAATGGCTTGAAATGGTGACAAATGCTTGTATATTTTTGGG # Right flank : TTTAAGATGATGTTGATTCTAAATCAGTCACGCTCAAAATTAACTTAATTATATTAATGTTAATAAATTATAGTATTAGAAGATAGGGAAGTAGCTATAAAATAGCACGTCCTTTTTCTATATGCTAAAATATGTATATAAAAAAGAAAAGGAGAAAATCTATGAGTTGTATATTTTGTGAGTATGATAAAGAAGAATACATAGCAGAAAATGATTTATGTTTTGCTATTTTTGATAAATTTCCTGTTAATGAAGGACACGCTCTTATTATTCCTAAGAGACATTTCTCTAACTACTTTGATGCAACAAAAGAAGAAATTGCAGCAATATACGATTTATCCCATGAGGTTAAGAAGATTATTGATGATAAGTATAGTCCAGACGGATACAATGTTGGGGTTAATGTTAACCATGAAGGAGGTCAAACTATTATGCACCTTCATATGCACATTATTCCAAGATATAAAGGTGACATAGAAGATCCTAGAGGTGGTATTAGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTTAACTATGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //