Array 1 3476-2234 **** Predicted by CRISPRDetect 2.4 *** >NZ_UODE01000035.1 Klebsiella variicola strain 2485STDY5477978, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3475 29 93.1 32 ............TG............... TTCCTGTTCGGCTTCGCGATTATTTCCACCTT 3414 29 93.1 32 ............TG............... AGACCGGTATGGAAGCGAAAACGGCAACCTTC 3353 29 93.1 32 ............TG............... AATTGGGCTACCGCATTATTCCACCCTCTGAT 3292 28 96.6 32 ..........-.................. TGGAGTTTTAGATAGTCATAATCACCGTCGTG 3232 29 100.0 32 ............................. CTAATCAGCGGTATATTTTTTCTAATCTGAAA 3171 29 93.1 31 .............T.T............. GACAGTCACTATGTTCGGTATGTTTAAAAGA 3111 29 93.1 31 .....T.......T............... CTCTGAGGATGATATGCACCGGCACAGGTGC A [3084] 3050 28 86.2 31 T...........T...T....-....... TGACTTTTAGTAGTGCTTTTTTTTGTTTTTT 2991 29 93.1 32 ..C..........C............... GCCATGCAACGTCTGAACGTCCGAAACATCCC 2930 29 100.0 32 ............................. AGCAGTTCGAGGAATAGTGACAGGCAGTGCAG 2869 29 96.6 32 .............T............... GCAGCGGCCTGACGATGATCGATATGAACGGC 2808 29 93.1 31 .............G.A............. TTCCCTGCACTAAGACGCTGGTGGTCGCCAC 2748 29 96.6 32 ..........................T.. CCGGTTCGGATTTTGCGAAACAGGTGCAGGGC 2687 29 93.1 32 ............TC............... TGACTTTTGCGCAGCCTCAGGGCTCCGGTTTG 2626 28 96.6 32 ..........-.................. AACAATTTGAAGTTTCTGCGCCAGGTCGTTTC 2566 29 100.0 32 ............................. TGTGTGTTGGCGTTCGTTAAATATTGTTAGTA 2505 29 100.0 32 ............................. GAAAGTAGGGGCTACGCCGGAATTCCGAAGAG 2444 29 93.1 32 ............TG............... GCTGGATTTCCGTCAGTTGGTCAGCTGCTGCT 2383 29 93.1 32 ............TG............... TTCCGGACTCCTGTTTGCGGCAGTGGATTAAA 2322 29 100.0 32 ............................. CACTACCAGATCCGAATGGACACCCGTAACGA 2261 28 89.7 0 ..............C........-....A | ========== ====== ====== ====== ============================= ================================ ================== 21 29 94.9 32 GTATTCCCCCCGCATGCGGGGGTTATCGG # Left flank : GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAGGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACTGGCGCAGAACTCCGCCATCGCATGAGTATTAAAAATGCGACTGATGAAGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGGGGGCATGCGAATCATAACTGCGGTCTGGTTGAGGCTCACTGGACAGTAACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCTCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATTATCAACCGGTTATTTTTAGA # Right flank : CATAAAAACCGCAATGGTGGGGCTTTTGTTATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCTTCAGGATAACCCACATTCTGTCATATCTTGCAGGTTGCAATCAGAAAAGGCCTTACGTCGATAAATTCATGCCTTGAACTGGTAAGGAAGTATGACGTTATAACTCTGCATTTCTGGTTGATTAAGGTAGGGCGGCATTCCTGCTTTAAAAACAATCACTAATTTTGAACGGTAGTCGTCTTGATCCCAACTGCTACCTGATGGACTAGGCACCTGCAAAGAACCAATTTATACTGTTTATATATACAGTATTTTTAGGTGGTCGGAGGTTGTGCCTATGTTCTTAATTCCAATGGAAAATCCTGAGAAAATCGCCATCCCTTTATTTCTCGAGCGGTGTGCAGCTGGCTTCCCAAGCCCTGCCCAGGATTATACTTCCAGTGAGCTAGACCTGAACGATTATTGCATCAGGCATCC # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGCATGCGGGGGTTATCGG # Alternate repeat : GTATTCCCCCCGTGTGCGGGGGTTATCGG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.15,4.77 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], //