Array 1 117313-119064 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLRG01000036.1 Streptococcus iniae strain QMA0186 NODE_1_length_210824_cov_75.2314_ID_913, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 117313 36 100.0 30 .................................... AGCGACTGGCTCAAATGGTGCAACTATCGT 117379 36 100.0 30 .................................... GCATGATCAGCGTTATAAGCGAAATAATAG 117445 36 100.0 30 .................................... ACCACCATCTTTTTGCTTGCTAGCTACAAT 117511 36 100.0 30 .................................... TTCTTTTCTGAAAATTTCAAATAAGTTTGA 117577 36 100.0 30 .................................... GCTGAAAAGACTGCTGTACTCGTTGGAATA 117643 36 100.0 30 .................................... CCTCACCATCAGGCAAAGACCTTGATACCT 117709 36 97.2 30 ..........G......................... AAAGACTTATAAGAGACTATACAAAAGGTA 117775 36 100.0 30 .................................... TCCACACTCGCCCATTAATGTGTGAGCATT 117841 36 100.0 30 .................................... ATGCACCAATCTCTAAAGACCTCTATCCAT 117907 36 100.0 30 .................................... TAGATCCCCGCATTTTTGACGAAAAAGCTC 117973 36 100.0 30 .................................... GCACTAGCAACAGACCAAGACTCGCACGGA 118039 36 100.0 30 .................................... TGCAACAAATAGCCTTATTATTGCTTTTAA 118105 36 100.0 30 .................................... TCCTTTTTGAGTAAAAGCTATTGTCTCATT 118171 36 100.0 30 .................................... GTTTGATGATGTTGTCTATACAAATACTGA 118237 36 100.0 30 .................................... TTTGATACGATCTATGTCAGCGAGCATTTG 118303 36 100.0 30 .................................... GTTTTAGCTTTTTTAAATTCTTCTTGCTTC 118369 36 100.0 30 .................................... GTGGCATTTTTGGAAATAGTTAGACAATTA 118435 36 100.0 30 .................................... AGGTGTCAAACTTATCACAGCTCTTGTTCA 118501 36 100.0 30 .................................... ACAATTATTTTATGTCAGATATTGATGAAT 118567 36 100.0 30 .................................... GTGTTCGCCGAATAAGTAGAATTAAGAAGC 118633 36 97.2 30 ..........................C......... CCTGCAAAAGATTCATATGCGATTAGTTAT 118699 36 100.0 30 .................................... CAAGTCTTGCAACAACAAGTATCCACTACA 118765 36 100.0 30 .................................... ATATATATCAATGGAAATACCAAAACGTTT 118831 36 100.0 30 .................................... TTAATTCCTTGGTTGTCAGTGTAATAGATA 118897 36 100.0 30 .................................... CGGTTTAGCTGCTCTTGAGAAGATTGTATT 118963 36 100.0 30 .................................... TACAACAGTACCTATAAGTGTGGCTACACC 119029 36 75.0 0 ................T.....TG..T.T.TTT..G | ========== ====== ====== ====== ==================================== ============================== ================== 27 36 98.9 30 GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC # Left flank : AACCAGAAGTAAAATCAATGATCGAAAAACTTGCTGCAACTATTACCGAATTAATTGCTTATGAATGTTTAGAAAATGAGTTGGATTTAGAATACGATGAAATCACAGTTTTAGAGCTAATTAAGGCCTTAGGTGTAAAAATTGAAACTCAAAGCGATACGTTTTTTGAAAAATGTCTGGAAATCGTACAAATATTTAAATATTTAACTAAAAAGAAGTTACTAGTTTTTATTAATAGTGGAGCATACTTTACTAGAGATGAATTTGAGAAACTGTTAGAATATATTAGTTTGTCTAGTCAACCAGTCTTATTTTTGGAACCAAGAAAGATGTATGATTTTCCTCAATATGTTTTAGATGAAGATCTTTTTATGCTAACTGAAAATATGGTATAATAGTATTAAGAAAGACAATAGTAATTAAAAGGATCATCAAGATAGAAGTCTAGCTGAGACAAATAGTGCGATTACGAAATTTTGTAGAAAAAATTTAGCTACGAG # Right flank : GGCAATATTTCCCATTTGAATAACTTACATATTCGGAAACCGCTTTCAAAAATAGTTTTTTTATGCTATACTGATAAAAAAGCTAAGTGAGGGCATTATGGAAAAAACCTTTTTTATGATTAAACCAGATGGTGTTAAGCGGGGGCTGATTGGTCAGGTTCTTGAACGTATTGAGCGTAGGGGTTTTGTGATTGAGAAGTTGGAATTGCGTCAGGCTGATGCAGCAATTCTGAGAAAACATTATGATTTTCTGGTTGATAAACCGTTTTTTCCAGAGATTGAGGCTTACATGACAAGTGGTCCTCTGTTGATTGGTGTTTTGTCAGGCAATCGTGTGGTCTCTTCCTGGCGTATGATGATGGGGGTTACAAATCCTAAAGATGCCCTGCCAGGAACAATTAGAGGAGATTTTGGGCAAGCGCCAGGAGACGATGGTGGCATTCAAAATGTGGTGCACGGTTCAGATTCTATCGACGCTGCAAGACGTGAAATTGATATCT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //