Array 1 396817-394048 **** Predicted by CRISPRDetect 2.4 *** >NZ_RBXE01000003.1 Streptomyces sp. 1114.5 Ga0151194_13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================================================================== ================== 396816 29 100.0 32 ............................. GCGCGGAAGGCCGCCGACGAGGAGCCGACCCG 396755 29 100.0 32 ............................. CCGGCGTCGTACGCAGCCAGGGCCCGGACGTG 396694 29 100.0 32 ............................. GCGTCGGAAGGCGACCCACACCCTGTTTCGGG 396633 29 100.0 32 ............................. GCGGCGGTCGTGGACGAGGCTGGCGTGGTCCA 396572 29 100.0 32 ............................. CCAGTTGGACGTTCCGGCAGGTCAGACCGCGC 396511 29 100.0 32 ............................. TAGTGGGTGTCCGTGCCGACCCGGTATCTGTC 396450 29 100.0 32 ............................. AACCAGCGTGTCCAGCGGATCGGGCAGGCCGG 396389 29 100.0 32 ............................. TCGGTGGTATAGCGGCAGGTGGAGCAGCTCTT 396328 29 100.0 32 ............................. CACCCTCCGACGCTGCCGATTCCATGATCAAA 396267 29 100.0 32 ............................. CCGCCGACGTCAGCATCACCACCACCGTGCGC 396206 29 100.0 32 ............................. CACGCGATGTGGACGGCGGCCGGGATCGTGGG 396145 29 100.0 32 ............................. CTCGTGGACGCCGCATGATCCGCACCACCACC 396084 29 100.0 32 ............................. GGGCACGGCCACGAGGTCATCACGGCCGTGGC 396023 29 100.0 32 ............................. GCGCAGGCCGTCCGTCACCAGCTGCACGAGCA 395962 29 100.0 32 ............................. CAGCACCTGAGACGAGAAGCGCTGTGCCTGGG 395901 29 100.0 32 ............................. CAACTCGATCCTCGCCGGCACCTCCCTGGTAC 395840 29 100.0 32 ............................. GTCTGGGCGGCGGCCACCAGCGCCGGGAGCGG 395779 29 100.0 32 ............................. TGTTCGATCTTGTGTCGGAACTGCCCCAACTT 395718 29 100.0 32 ............................. CGCAACCGCTGGCCGTTGCCGACCATCGGCGC 395657 29 100.0 32 ............................. TCTTCCGGGGCCGCTGGGCTGTTTCAGATTCT 395596 29 96.6 32 ............T................ CGCGTGCCAGCGGGGATTGGCCGCGGCATGGG 395535 29 100.0 32 ............................. GCCTGCGCGCGGAAGTGTCGCGCCCGGGTCCG 395474 29 100.0 32 ............................. GAACCCCGGCCGGTCACCAGAATCCGTAACCC 395413 29 100.0 32 ............................. GGGGCGTGATGGTCAACAAGCTCACTCAGCTC 395352 29 100.0 32 ............................. GTGAGATGTTCTTTGTCGATCCGGCGAACATC 395291 29 100.0 32 ............................. CAGCCAGCCGTTCGGGTTGCGTCGATCAGGCT 395230 29 100.0 32 ............................. ACCGCCGCAGCCACGGTCGTGCCGGTGCCCCG 395169 29 100.0 32 ............................. AGCCGGGCCGATGCCTGGCGGAGCGCGGCCGC 395108 29 96.6 32 .................A........... TGGACCTTCGCCGGCAGGAGGAGCCAGCGGGG 395047 29 100.0 32 ............................. TAGCAGGTCACGCATCGGTGCGTGGGCTCGGA 394986 29 100.0 32 ............................. TACACCGGGTTGCCGGTGGCGATGTCGATGAA 394925 29 100.0 32 ............................. GTCGTCCTGTGTGACCGGTACATCGCCAGCTC 394864 29 100.0 32 ............................. TTGCCGGTCCCGGGCCCGTGGCCGGAGGGGGT 394803 29 93.1 31 ...........................GA TCCCGAGGAGGACGGGCCCGAAGATGCCGAG 394743 29 96.6 32 ..........T.................. GACGCGGTCGAGCGAGTGGCCCGCACCGCCGA 394682 29 96.6 32 ..........T.................. TCCTCCCCCAGCACGAGGAGACTGCCGTCGTG 394621 29 96.6 32 .................C........... GAAGGAGGCAGGCCATGAGCCAGCCTACCGAC 394560 29 100.0 32 ............................. TTCGGCATGACGGCGGCTCAGATCTTCGACTA 394499 29 96.6 32 ..........G.................. TCGCCGATGGACCCGCGCCTTACGTTCGTCGG 394438 29 100.0 90 ............................. GTGGTGGTGGCTTGACCAACATAGAGAGCATGCTCGTCCCCGCGCCAGCGGTCAGCCGCCGTTGCGCTTGGTGTCGCTGTAGCGGGGGAA 394319 29 86.2 32 ...........TA.......CA....... TCCTTCGGCACGTCGGCGTCCGAGGCGAGGAT 394258 29 96.6 32 ............................A GACTTCGAAGCCGCCCTTCGCATAGCTGGCGG 394197 29 100.0 32 ............................. TACACGGCGCTGATGACCGAGCAGGGCATCAA 394136 29 96.6 32 ...A......................... ATGAACGTCCCGACGATGGGCGGCTACTACAC 394075 28 93.1 0 ...C..................-...... | ========== ====== ====== ====== ============================= ========================================================================================== ================== 45 29 98.8 33 CTCGTCCCCGCGCCAGCGGGGGTCAGCCG # Left flank : CACCGAACTGGGCGACGAACGTGTGCCTCGGCACACCCAGCCAGTCCGCCCAGGTGCCGTACTCCCGAGTCTCGTCGACCAAGCACTCCCCGACATCGAACACCACAGCCGTGATCGTCATGGCCGCAGCCTAACGACGACGGGATGTTCTGTTTGGGGGCCGTTCTCTCGACGCCCGGCACCGCGACTTAGCCTCGCGACAACCAGCAGGGCTGGGCCTGGGGCATCGTGGCGGGTCGTCGGGGCTCCGCAAACGCCTGAGGCGCCATCGTGGATGCCCTCGTCCCATCCCTGGGGCCCTGTCCCCTTGGCCCCGCTCCTGCCAAACCGTGAGGCGGTGGAACTCCCGTACTGTCGCCCACGCCACCATCGGGAGACATGGCACGATGGGCTACACGCTCTTTGACACCACAACAACTCACCGAAGCCCAGCGCCTCGGCGACCGTCGATCATGGCAAAGAAATAGCAAAGGACGACGCTACGTTGCAGGTCAGAAAGC # Right flank : CCTACGGCGTGCGGCCGGGTCAGCGGCTCGTGGTGAGGACCGTTTCCGTCCAGCGCCGGAAGTGGGTGATCAGGGCGGCGGAGCGGGCCGTGCCGTGGGGGAGGGCGGGGAGGAGGGCGAGGGCGGGGAGGGAGGCGGTGAGGGCCAGGATCAGGGGGATGAGGGCCAGGGCGACGATGAGGGTGCGCTGGCAGGCGACCAGCTGGCGGGCGATGGCGGTGATCATCAATTGTCCTTCGGCTGCGGGGACTTGGGCTCGGCGCCTACGCTTTCGTCCGGTGGCGGCGTTGCGCCAGGGGCAACGTGTTGCCGATCGGCGGCAACGGAACGCGGCGGTGGCGGAGAAGGCCGGAGGGGTTGCGGGTGTTGGAGCGACGCGGGGAGGTTCCGGAGCCTTACGAGCCGCCGGAGCCGGAGGTGCGGGCGTTCGTCGAGTTCATCGGGCGGCTGTTCGCCGTGCTGGGCACCACGCTGACCAGGTACGCGGCCCGCTGCAGCCG # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGTCCCCGCGCCAGCGGGGGTCAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCGCCCGCGGGGGTCAGCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 419571-417116 **** Predicted by CRISPRDetect 2.4 *** >NZ_RBXE01000003.1 Streptomyces sp. 1114.5 Ga0151194_13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 419570 29 100.0 32 ............................. AACTCCGGCGTCAGTTTCGCCCTTGCCCGGGC 419509 29 100.0 32 ............................. GGGCGATTCGTCGGCCGGGTACTCACCGGCGG 419448 29 96.6 33 ............................A CCGGTGTAGTGCCGCATCACGACCTGGTAGCCG 419386 29 96.6 32 .............T............... GCCTGCACGATGTCGATCTCGCTGGACTTCGG 419325 29 100.0 32 ............................. CCGGACTGGAGCACGAACGCCTGGACGTTCGC 419264 29 96.6 26 .G........................... CGGTCGGCCTCGGCACGCGGGGATGC 419209 29 100.0 32 ............................. ACGCTCTGGATGCATTCCAAGGTCGGCGTGTG 419148 29 100.0 32 ............................. CCCCAGGGGCACGTTCCGGTGAAACTGAATCG 419087 29 100.0 29 ............................. GCCGGCGGCGGCCCTCTGCCGGTTGGTCT 419029 29 100.0 32 ............................. CCCCAGGGGCACGTTCCGGTGAAACTGAATCG 418968 29 100.0 32 ............................. AACCACACCCATGCCCGAACCCGCCCCACCAA 418907 29 100.0 32 ............................. TCGAACATGGTCGTCACGTGGTGGATGCCGGT 418846 29 100.0 32 ............................. CCACCGGACCCGCAGCCGCAGCCGCAGCAGCC 418785 29 100.0 32 ............................. ATCCTTGACGCCGTGGCCGCCTCCATCGCGGA 418724 29 100.0 32 ............................. CGGCCATGATCGATGATCGCCAGCTCGCCGAA 418663 29 100.0 32 ............................. GTGTCGGAGATCTGCACGATGTCAGTTCCCAC 418602 29 100.0 32 ............................. TCTCCGGGCAGCGTGGCGCCGATCGGGATGTG 418541 29 100.0 32 ............................. CCGGGCCCTCAGCTCGTCCGGGGTCTGGTTGC 418480 29 100.0 32 ............................. TTGTTCGAGCAGCAGTTGGCCGCCGCCGTCCA 418419 29 93.1 32 ....................A.......A GCGCGAGCGGCCGACCCACCCGGGCCTGGTCG 418358 29 100.0 32 ............................. ACGAGATCAGCCCGCTGCAGCGCGTCGAGTGG 418297 29 100.0 32 ............................. TACTTCCGGAGCGCAGCGAGGATCACCACGGC 418236 29 100.0 32 ............................. CCAGTCGATCGCGTCGCGGAGGCCGGTGAGCA 418175 29 100.0 32 ............................. ACCGACCTTCTGACGGTGTGTCTGCCGTTGGA 418114 29 96.6 32 ..............G.............. CTGGCCGCCGACGGCGAGCGCTACCAGGACCT 418053 29 100.0 32 ............................. GCGCTGCTGGTGATCGGCCTGCACGCGGACCG 417992 29 100.0 32 ............................. GGAGACCTGCGGTTCTGCCTGGCCGAATACGA 417931 29 100.0 32 ............................. TCGCCGGGCAGTTCCATCGGTTCCACTCCTTC 417870 29 100.0 32 ............................. CCCCGGCGCCCCTCCGCCGCCGGGGCCGCCCG 417809 29 100.0 22 ............................. ATCTCAGACGCCGCGGCCACGT Deletion [417759] 417758 29 100.0 32 ............................. ATGCTCTGGTTCGCCATGGTGATGGCGCCGGT 417697 29 100.0 32 ............................. CCGGATCTGGCGCGAGTCGTTCGCGCTGGTCA 417636 29 100.0 32 ............................. GCCGATGCCGGAAGGGCAGAGTCTGCACCCGG 417575 29 96.6 32 .................C........... CCCGAGCACAACACGCTCTTCTGCACCCGGAA 417514 29 100.0 32 ............................. GTGATCGCGGAGTTGACGCCCGCGAGGATGAC 417453 29 96.6 32 ............................A TCCTGACAACCAGGTCTGAGGAGGGAGTTGGG 417392 29 100.0 32 ............................. GTGATCTCGGTTTCGTGCTGGGCGTCCATGCC 417331 29 100.0 32 ............................. CTCATCGAGCTTGGAGTGACGGCAGGCGTGGT 417270 29 100.0 32 ............................. CTGTCGTCGGTGATCTCGGGCATCCTGCGCGG 417209 29 100.0 32 ............................. TGGGCGAACGTCACGGTGTTGGAGCCGGTGGG 417148 29 96.6 0 ........................C.... | T,T,T,T [417118,417120,417122,417127] ========== ====== ====== ====== ============================= ================================= ================== 41 29 99.3 32 GTTCTCCCCGCGCCAGCGGGGGTCAGCCG # Left flank : GAAGGTTGTGGCCCGCGTCCGCGTCGGGATCTCGGTTGCCGAGTTTCAGTCGGAGGCGTCAGGGAGGGCCCCATCGGGGCTTTTGGCTCCTGGCTCGACGACGCGCGAGCGCGCCGGATGACGGCTGACGATGGCGGCAGTGCCGGGGGCGGGGGCACACCTCTTTGCATCGGCCTTGCGGCACACGACCGTTCGTGCGCCGGTCAGCAGACGGGCGGATTTCCGGGTGGCGGGCGGAGGAACTGAGCAGCGGGGACCGGCTCTCCTGTAGGTGGCTCCGCCCCACCGGTGCCGCGGGAACGGGCCGGGGCTCTGCCGGAACGGCGGGCTCAGTTCCTCTGGGGGCAGCTATTGCCTCGTCACAGCGTCACCGGCCCGTGGCACGATGTCCCAGGCTCTTTGACACCTCAACAGACCGGCTGCTGCACAAGCTCACTTGCACCACGCCACATTTGGCAAAGAAACAGCAAAGCCGCCGCATCGCCCAAGGTCAGAAAGGG # Right flank : GTGAGCGTGGCGGAGTCTCGGCGATCGTGGCGAGTTCGGCCTCGTTCGTCTCGGTGAAGTTGGCGAGGATGGCAGATGAGTCCGGTCTCATCGGGCCTGGTGGTGTCTCACTCATCCCAGGCGGTAGTCGGCCGATTCGCGGCGCGCGCGGCTGGCCGTGCCCGGTTTTCACCTTTCAAGGTGGATTGAGTCTCATCTGATCCGGCTGGTCTCACTGGACCCGTGATGGTCGTCCCATTGACAGGACGCACGCACTCTCGGATCGACGAACTCTTGCAGTTCCACGGCACGGGCACCCGTCAGTCCCGCGACTCGCCCAGACCTTCAAGGTCTCGCGCGGAACGGTCTATCGCCACATCAGCCTCCCCACCGGGAAAGACGACCGGCAGGCACTTTGAACCGAGCCCGCTACCAGCAGCCGCAGATCCCTCCAGAGGTCACGACTCCACGACGCGCGGGCTGGCGAACGCCGAGTTGTCGATGACGACGTCCATCATCGG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCCCCGCGCCAGCGGGGGTCAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCGCCCGCGGGGGTCAGCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 423990-422378 **** Predicted by CRISPRDetect 2.4 *** >NZ_RBXE01000003.1 Streptomyces sp. 1114.5 Ga0151194_13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 423989 29 96.6 31 ............................A CCACGATCAACCTGGGCTCGGGTTTCCAGAC 423929 29 100.0 32 ............................. TAGATGGTGTAGCCGCGGGCGCGGAGGGTGGC 423868 29 100.0 32 ............................. GCGATCGCGGATTCGTTCCGGGTTGCGCCGAG 423807 29 96.6 32 ................G............ AGGACGGCGACGGCCAGGGCGACGCCGACGAT 423746 29 100.0 32 ............................. CAGCCGAGTTCATTGCCGACGACGTGCAGTGC 423685 29 100.0 32 ............................. AGGGCCGAGGCGTCCGGGGCGCCGGCGTCCAG 423624 29 100.0 32 ............................. ACCGTCTTGGTGAGGGTACGTTGCTGGAATGC 423563 29 96.6 32 ..................A.......... TTCACCAACCGGTTCGATGTGACGACGATCTT 423502 29 100.0 32 ............................. CTTCAGATCCCGAAGGACATCCGTGAACGCCT 423441 29 100.0 32 ............................. ACCTTCTTCGCGTACTCGGAGTCTCGAATGAC 423380 29 100.0 32 ............................. AATGCCCCGGACGGTGCTGGCCCCGCGCGCAA 423319 29 100.0 32 ............................. CTTCCGAGCTGCCACGGCACCCCGAGGGGTCG 423258 29 100.0 32 ............................. TGACACGTGTCGTGGGTATGCCGGACAGTTAC 423197 29 100.0 32 ............................. ACGTACACCCGCCACTTCGACGTGGAGAGCAG 423136 29 96.6 32 ..........................T.. CAACAGCGTGCCCTGCCGCATGTTTCGGTGGA 423075 29 100.0 32 ............................. GACATGGCTCACCCGTTCCAGTACCCCGGACG 423014 29 100.0 32 ............................. GACGACCGCATCCACCTCGTCCAGATCGCCCA 422953 29 100.0 32 ............................. TTGGAACGCGCGGTGGGCCGCGGGCCGACTCG 422892 29 96.6 32 ............................A CGTCCTGCACCCCCCAGACGTCCCCGGCGCTC 422831 29 100.0 32 ............................. GCGCGGGCGCTGGCGGGCGGCACGGTGATGTA 422770 29 100.0 32 ............................. CCCTCGATCTCGCGGCCGATCTCGGCGTCCTC 422709 29 100.0 32 ............................. CGGCCCGGCCCGTCCGGGCTGTGAGACTTGTG 422648 29 100.0 32 ............................. CGCCTGGGCCTGGTGCAGGGCAAGGGCCAGGA 422587 29 100.0 32 ............................. CCGCGCGAGCTGCGCGGAGCCTGCGGAGAGGC 422526 28 93.1 32 ..................C..-....... CGCCCTGACCTGGTCGAGTGCGACGACTTCGA C [422518] 422465 28 93.1 32 .....................-....T.. TCGGAAATGCGTGATCCTCCCTTGGATCGTCA 422405 27 89.7 0 ...........--..........A..... | A [422389] ========== ====== ====== ====== ============================= ================================ ================== 27 29 98.5 32 GTCCTCCCCGCGCCAGCGGGGGTCAGCCG # Left flank : TGATGGCTGTACGTCGGCTCGCTACTCCCCGTCGCGCACGAGCCCCATTCAGTTCCGGACGCACCCGTGGCGCAACAGGGAGGGCCCGATCAAGGCTCCTGGCTCAGCGACGACGTCACCGCGCCTGACGGCGATCGACGACGGGAGAGCACCGGGATCCTCCCCGGGGGCGCCCCCCTGCATTGACGTTGCGGCACCCGGCCGTCACGTGTGTGCAGATCAGCAGGCAGCCGAGTCTTCCGGACAGCGGACGGAAGTGCCGAGCAGCGGGAATTGACTTTCCCACGTGTGACTCCGCAGCAATGGCCGGCTGCCGCACAGATCGACCTGGGCTCTGGCAAGCGGGAGGCTACGTCCCGTCGCAACGTCACCGGCACATGGGACGATGTCCCCGGCTCTTTGACACCTCAACAGACCGGCTGCTGCACACGCTCGCTTGGCATCACGCCAGATTTGGCAAAGAAACAGCAAAGTCACCGCATCGCCCAAGGTCAGAAAGG # Right flank : CCGGAGAACATCATCCCCGGCCGTGGAGCTAGGGACGGTTCGCGAGGCCGTCGCCCTGGCGCTGGGTGGCCGGGCCGGTACCCGGCTCGCCGAGCACCTGGCGGTCGGGACCGGCCGGGACATCCAGATACGCCTGATCCGCTCGCTGCCGGACCCGCTCACCGGACGGGTCCGGGTGCTCGGCGTCGACGATTTCGCCCTTCGCAAGGGCCACGACTACGGCACGGTCCTGGTCGACATCGAGGCCGCCGTCCCGTCGAGGTCCTGCCCGAGCGGTGCGCCGATGCCCTGGCGGAGCGGCTCACCGAGCATCCCGGCGTCGACATGCTCTGCCGCGACCGGCCCGCTACTACGCAGATGGGGCTGACCGGGCGCCGGCACGGCGACGCAGGTCGCGCACAGGCTTCACCTCTGGCAGAACCTCGGCGAGACGGCCGAACGGCTGGTCGCCCGCCCGTGCCCGCTGTGGGTCCCGCCCATGCCAGAGAAGGGGCGGGTGG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCGCCAGCGGGGGTCAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCGCCCGCGGGGGTCAGCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 446458-446064 **** Predicted by CRISPRDetect 2.4 *** >NZ_RBXE01000003.1 Streptomyces sp. 1114.5 Ga0151194_13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 446457 29 100.0 32 ............................. CGGTCCGGCCGACGCACCAGCCGCCCATCGGC 446396 29 100.0 32 ............................. CGAAAATAGCCGTGTCGGCATGGCATGCGGCC 446335 29 100.0 32 ............................. ACTTAGCAGGTCGGAGCCCGTAAGCGTGTACT 446274 29 100.0 32 ............................. TTGGTGAAGTGCCGCATGGCGACCTGGTAGCC 446213 29 100.0 32 ............................. CGGTCCGCCTCGGTGAACTGGGGGCCCGGGCC 446152 29 100.0 32 ............................. AACCCGAGGATCGCGGAGATCGGCGGAATCAG 446091 28 93.1 0 ..............-.........T.... | ========== ====== ====== ====== ============================= ================================ ================== 7 29 99.0 32 GTCCTCCCCGCACCCGCGGGGGTCAGCCG # Left flank : CCGCTGCACCGGTGCCGAGCACCGAGCCCAAGCCCGAACCCGTCTCCGCTGCGGACCCCGACCGATTTTCCGCGGAAAATTCCGACCCCCTCCCGATGCCCGAGCAGCGCGCCGTGGCCCCGTCGACCGACGAACAGCCGGCGACCACCACCCCGCAGACCACAGGCCTCGGCAACGTCGACTGGCATGACGTCGAGGAACTGGCAGACGCCATCTGCCGCACCCTCTCCGCCGACGAGGCCTACCGCCTCGCCGACGCCCTCGCCAACCGCCTGCTGACCACCAGCAGCTGACAACCCCCTGGTGTCCCGCCCCCCGCCCAGTGGGTGGGGGGCGGGACACCACAACGCGTCGAGGCCGACACACTGTCAGACACAGGTGACACGATGTCCGGAGCTCCTTGACTCCTCAACAGCCCACCACATCGACAAGCACCCCGAAGCCGACGCCCCCTCAGTCAAGAAACAGCAAAGCCGCCACTACACCGCAGGTCAGAAAGC # Right flank : TTCGTACGGATGGTCCGGAGGTGTCCGATGGGAGTTTCCGTCGCCGGGGCCTTCCTGGTGTTGCCACGGCCTGACGGTGGTGTCAGGCCGGGTGGACGAGGCGGCTGTCGTAGGCGAAGACGACGGCCTGGATCCGGTCGCGGAGTCCGAGTTTCTGCAGGATCCGCCCGAGGTGGGCCTTCACGGTCGCCTCGGCGAGGTGCAGGGCGGCCGCGATCTCGGCGTTGGACAGGCCGCTACCCACCTTGACGAGGACGTCGCGTTCGCGCGTGCTGAGCCGGCTGAGTCGTTCGTCGTGGTGGTCGGTGCGGCTCCCGTGGGGGAGGTACGGCCGGAGGTCGTCGAGCAGGCGGCGGGTGATCCTCGGGGCGAGAGCGGCGTCGCCCGCGGCCACGTTGCGTATCGCGGTGAGGAGTTCCTCGGGCCTGGCGTTCTTCAGCAGGAAGCCGGAGGCGCCGGCGGCGAGTCCGGCGAAGGCGTATTCGTCGAGGTCGAAGGTG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCACCCGCGGGGGTCAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCGCCCGCGGGGGTCAGCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-13.10,-13.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //