Array 1 25628-24868 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FZOY01000015.1 Tropicimonas sediminicola strain DSM 29339, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
     25627	    32	 100.0	    34	................................	TACGCTACCCGCGACGGCCTTCTGGCGAACGAAA 	
     25561	    32	 100.0	    35	................................	ACCCGCAGCTCCGGCTTGCGGCCTAGCAGCTCGAT	
     25494	    32	 100.0	    34	................................	TTCGTGGATGGACATGGAGACGTTGCCCGCGCCG 	
     25428	    32	  96.9	    35	................T...............	ACGCTGTGGAAAGGCGACGAGGACCAGAAGGTCTC	
     25361	    32	  96.9	    34	..A.............................	GACCCAGAGCCGGGCTGGATGGCGTGGGTCAATT 	
     25295	    32	  96.9	    34	G...............................	TGCGCCGCCTGCCGCTCCAGCCGGTCGGCCACGT 	
     25229	    32	  96.9	    33	G...............................	AGCGTGACCAGCGCCTTCGGCCGCATCTTCCGC  	
     25164	    32	  93.8	    35	G..............T................	ACGGCGATCACCATCGACGAGGACACCTACGGCAT	
     25097	    31	  93.8	    33	G...-...........................	ACGCTCAAGGAGTTGGTCGTTTTTCCGGTCCTG  	
     25033	    32	  96.9	    34	G...............................	CAGATGAACGTTGCCCTCGATTTCGTCGGCAACA 	
     24967	    32	  96.9	    35	G...............................	ATCCATCACGCGGGCGTCGTCTTCCGCGTCTTGGA	C [24963]
     24899	    32	  87.5	     0	G...........T..............A..G.	|                                  	
==========	======	======	======	================================	===================================	==================
        12	    32	  96.4	    34	ATCGCCCCCTTCACGGGGGCGTGGATCGAAAC	                                   	       

# Left flank :   GCCTGCACGGACTATGGCCAGCGGGTGCAGTTTTCGGTGTTCGAGGTAGAGGTCGAGCCCGCACAATGGACGATGCTGAAGGCGCGGCTGGAACGGGTTATCCGCCCGGAGTTCGACAGTCTGCGATACTACTACCTTGGCTCGAACTGGAAACGTCGGATTGAACACTTCGGTGCCAAGCCGGCGACGGATCTGGGAGGCGTCCTTGTCATCTGAAGTGTTCCGGCTTTCTGTTGAGCAAGGTGCGCCGGGCAATGCGTTCAAGCCACGGGCGAGCGGTATCGTTTCCCGTCTCAATGCGATTCCGAAGCGACTGGTCTTGCTGCGAACCGCAAGCGTGCCGAACACGGCCGAGGGGCTCGCATATCGGTTGTGACACTGAAGTCAAACAACGATTGAATTCGCCAGGTCTGATGGACTGCCTGGATTCGCCTTGCTGCAATGCGGTTCGCGACACGGTTTGAGCTTCTCGTTCTTTGACAATGGTATACAGATAGGCG
# Right flank :  AGGCAGCGGGCGAGCGGCGCAAGGTCAGGATGGCTCACGCGGGAAGATGCCGGAACGTACGAGGTATCCAACTGGGATGGCGAGACGCTCCAGACGACGCGCGGGTTGCTGAATGCGCTTGCGGCCGGACTGTCGACCGTCCCGGCGCGCGTCTCCCAGGCTCGAGACCGATATCCGTTGCGCCGGTTCACCCGGTCGGCGCTGCATTCGTGTGCCCAAGCGCCGCAGAGTAGGTCGACATCCAGCACCATGAGACGATCGGCGACGAACCCGAGCATCTCCGCCAGCAGGTGGGTGTCGGAGGTCACCGACAAAAGCGCGCGCAAGGCTGCGGTCTCTTATAGGCTGTCCTTGGTCATGGCTGATCTCCTCGGTGATGTGTCAGTTTGGCAATCCGAACCTTAGCCAAAGAACAACCGTGGCCGCCAAGCGGCCCGCGCTACCGGCGGGAAATACACCAGCCCTTGGGACACTGCTTGGATCCGTCTCCGGGTTGCCGT

# Questionable array : NO	 Score: 5.49
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATCGCCCCCTTCACGGGGGCGTGGATCGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-3.30,-6.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [6-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [31.7-50.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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