Array 1 86579-84015 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGDT01000012.1 Dyadobacter jejuensis strain DSM 100346 Ga0180998_112, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================================================================================== ================== 86578 29 100.0 37 ............................. GATTACAGGCGTAGGTGTCCATTCGTTTAGTGAGCTA 86512 29 100.0 34 ............................. AACAGTTCGCCAAAGTGGTCGCAAGCGTCTTTTA 86449 29 100.0 36 ............................. TCTTTGTCGGTATACTTATCGGTCTTGATTGACCCT 86384 29 100.0 36 ............................. TTGTCTGCGAGTATCCTTTTACACTCCTTTGCCCAT 86319 29 100.0 36 ............................. AGTTGTTACCCACACTCTTTCAATACCAAAATCAGT 86254 29 100.0 36 ............................. CCAAAAGTAACTTTCTGTAGATTATATTGAGCGCCT 86189 29 100.0 37 ............................. CTATATGATTATCAATTAGTTATGGAAAATTTGGAAG 86123 29 100.0 37 ............................. TTCCATATTATAAAGTTCCAGCTATTAAAATTTTAGA 86057 29 100.0 38 ............................. TAACCATGCCTGAATTAATACCAGTGATAAACCCTCTG 85990 29 100.0 37 ............................. CGAGTTCTGATTTCTTAGCTAAGAAAACCGCACTAGA 85924 29 100.0 35 ............................. AATTAGAAGTGTAGCCGTTTGGGTTACTAGAGTTA 85860 29 100.0 35 ............................. ACGGAGCTAGCAAAGGAAACCAGAGGTTAGAGTAC 85796 29 100.0 36 ............................. GGAAGTGGTCCGGGCAGCAATAAACAAGATAGTAAA 85731 29 100.0 36 ............................. TGCCAAAAGTGGAGAGGTACTTGTTACCGCCAATGC 85666 29 100.0 36 ............................. TCCAAACATCTATTTTACATTCTATTACCAATCCCC 85601 29 100.0 36 ............................. CCTTAATTGCAGGTATGCGAATATACCAAGGTATGC 85536 29 100.0 35 ............................. GTAACTAGGTCTTGGGGCGACCTTGTTACCTAGTA 85472 29 100.0 36 ............................. CAATTACCTCGGCTTGGGTTACATTGGGGCGGTCAA 85407 29 100.0 36 ............................. TCTCATTACAAGACATGGAAAGATTTTCGAGACTTT 85342 29 100.0 36 ............................. AGCCAATAAGTGACTCTCTTAGTTGCGCACTAAGGT 85277 29 100.0 36 ............................. TTTCTTCGGGCCTTGATGGTTTCTTAAGCTCTTTCT 85212 29 100.0 36 ............................. TTGGGGCATCAAGAGGAATCGCAACGCCGCCCGAGC 85147 29 100.0 38 ............................. CCCAAAGAATTAAGCGATTGTACCAGCGCGCTGAGAAT 85080 29 100.0 36 ............................. CCCGTATTTCTAGATGTGCCGCCAATGTATTTTCCA 85015 29 100.0 36 ............................. TGGATTAACCTACACGGGCTCTTAACCCCTATCAAG 84950 29 100.0 37 ............................. CCATTATACGAGGACGGCAATACATGCCATAGCAAAA 84884 29 100.0 35 ............................. GAAAAGGATTAAGATATCCTTAGCCGACGTCGAAG 84820 29 100.0 35 ............................. GGTATTGGGCCGCAATGATTGGCCCATTTTCTGGC 84756 29 100.0 35 ............................. TAAGACTGCATATGGCCTTGGAACATCTATCTTAG 84692 29 96.6 35 ..........T.................. TAATAACCTGCTGCTTGGGCTTGTGTTAATCCGGG 84628 29 100.0 35 ............................. TTGCTTCTGCTTGGTCGTTGAGCGGAGCCGAAACG 84564 29 96.6 36 ................G............ ACGTATTTGGTCTATCACAGCTCAGCTCTGCATGCC 84499 29 100.0 36 ............................. GAGCGGATGAAGCACCGGCTTGTTATAAGAAATTAT 84434 29 100.0 35 ............................. TAGGTGGTTTTGCGCCAATCTTATATAATTTCAAG 84370 29 69.0 38 TC....G.T...TA.T..C.......T.. ATATTGTTCCCTTCGACTCCGCTCAGGGTACGGAATGG 84303 29 75.9 36 .G...T....T.AT...A........T.. AGCGTTCCCTTCGACTCCGCTCAGGGTACGGAATAG 84238 29 72.4 101 .G...T....G.AT...G....C...T.. AATGTTCCCTTCGACTCCGCTCAGGGTACGGAATGGCACTCTATCGTAATTGTGGGTACTGATTTAGTGTCCCCTTCGGCTCCGCTCAGGATACGGAATGG 84108 29 72.4 36 .G...T....T.AT...G....C...T.. AGCGTCCCCTTCGGCTCCGCTTAGGGTACGGAATGG 84043 29 72.4 0 .A...T....T.AT...G....C...T.. | ========== ====== ====== ====== ============================= ===================================================================================================== ================== 39 29 96.3 38 CTCTCAATCGCACCTGTTGGTATTGAAAT # Left flank : CTATGCCGTACTATATTGCTGTTTATGACGTAAATGAAAAGCGTGAAGGGAAAATGCTTAAACTTTTTCGGAGATATTTGACGTGGATTCAAAATTCTGTCTTCGAAGGAGAGCTTACTCACGCTCAGTTCAAATCATTAGAAATTGAGGCCGATCGACTAATGAAAGACAGTGATGGGGTGATCTTTTACCAACTCAGAGATGAACGATATGTAGATAGGATTGCGCTCGGAGAAGAAAAGGCTGAACGCACTCGTTTTCTGTGAGTTAGAACAATGTCTGATCGTCGACCTCAAAATTGCCCCCCATTTTTTGTGTCTTAAGAAATTTACCTTTCTCGAAACAGCCAATTAAATGTATAAAAAAACGCTTTGTAAGTCCTGAAAAGGCATGTCGTCATCCTCGGGCGTTTCAAGCGCTATTAAGGGATGACGATTTTTTTTGTTCTTTTTTGTCATAAAAACATTATTTACAAGCCATAATCCATATTTTTGCCCCGG # Right flank : AGCGTCCCCTTCGGCTCCGCTTAGGGTACAGTGGGACTTTAATTGCTAAAATTCACTTCAAAAGGTCCTAAAGGGAGTCGGGCATTATTGTACAATTTTAGGGAAGGAACTGGAAAGGGAGTCCAACCGTATCGTAGTTTTTGGGGAGACTCTACCGTCGACTGGAGGTGGATGGTATCGGCGCCCGATATTTGGGCCTTTACTCTATGAAAAATGCCATCTTGACCCGCTATTTCAAAGCCAGTAATGGGGCCTTCTACCGGTAGAAACCCTTTTCCGAACTCCTTGAAATAAAGCTGAATGTCGCGCCCGTTGATCCTCCATTTGGATAGTTCGGGGAAGCCCAATAAATTTTTCAACTCATACACATTTTTGAGGGCCAAGTGGGCAGCACGTTCACCTACTACTTGCTTATCTTTGGGGTGAATATCCTTTTCTTCGCCCAAGTCGAGGGTTACGACCATCTCAGTATGGCTTAGTTGCTTCTGGGTGAGGCGTTG # Questionable array : NO Score: 5.93 # Score Detail : 1:0, 2:0, 3:3, 4:0.81, 5:0, 6:0.25, 7:-0.13, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCAATCGCACCTGTTGGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.50,-2.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [42-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 1 92-3061 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGDT01000040.1 Dyadobacter jejuensis strain DSM 100346 Ga0180998_140, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================================================================================== ================== 92 37 91.9 36 GG..C................................ GTTTCTAGGTATTTCCTTTTCCTTGTGGCTGTTTCT 165 37 100.0 37 ..................................... TCTAGTTTCCCCATTGTGGCGACCAAGTCAGCTAAAA 239 37 100.0 36 ..................................... GGGCTAGACATCTACGAAATATACGCCAAGGCGAGC 312 37 100.0 35 ..................................... ATATCCTCGTAACGGAGCAAGACACGCAGCAAAGC 384 37 100.0 39 ..................................... CCGCTGGTGTGACTCATATATCACATTTTCAATTACCGT 460 37 100.0 38 ..................................... TCCCATTTTTGTTTTAATATCCACGAAAACCGCCCTAT 535 37 100.0 37 ..................................... TCCCGTATAGTGATGCCCGTGATGTGCAGGAAAGACT 609 37 100.0 36 ..................................... TGCCCAATTACCAAGGGCAAAAAAATGTGGTTAGGC 682 37 100.0 37 ..................................... CCAGTAAGGGTATAGTGTAAGTTCTGGAGTTGGTGGA 756 37 100.0 37 ..................................... CTTAACCAACCAACAATCATGAACACACCGCCAACCC 830 37 100.0 37 ..................................... CCGGCAAAATGTATGATTACTCTAGCGCCCTAAAGCT 904 37 100.0 36 ..................................... AGGTAGGAGGTGTTTGTGTCCCCTTTCAAGAACCAA 977 37 100.0 38 ..................................... AGAAAGAGGTCATTGATTTTGATGTCTTTTTGCCAACT 1052 37 100.0 36 ..................................... AATTTGTTAGCTGTTCGGATATTCCAGTTTTGCAAG 1125 37 100.0 36 ..................................... GAATATGAATGATTTCTATAATAAGATGCAATACCT 1198 37 100.0 35 ..................................... GAAAATTGGCTTTGATAGCTCAAGAATCTCCTCAT 1270 37 100.0 36 ..................................... ATCACAGCATATAGCTCAAAAACGTCATCAAGTGAA 1343 37 100.0 35 ..................................... TATCCAACTCGATAAACCTGATAAATCCTGATCAT 1415 37 100.0 36 ..................................... ACTGGCTTCTTTTCGGAAAAGACAGTGCCGACCGGA 1488 37 100.0 37 ..................................... AATCCATTGGGATAACCGTAGCTTCAACCCCGAAAGG 1562 37 100.0 38 ..................................... AACAAAAGACTTGCTTCGGAGGATCAAATTAAAAAGAT 1637 37 100.0 36 ..................................... GAAGGCGCTTATAATTAACATCCAGTGCGCTGCCGG 1710 37 100.0 36 ..................................... TATTGGTTTGCTTGTAGTATAGGTATTTTAGCCTTT 1783 37 100.0 38 ..................................... CCGTCATTCTCTACTATCTGGAATGCCGGGAAAGTTTA 1858 37 100.0 36 ..................................... GGTAAGATGGTACGATTCTTTCCCCTTTGTGTAACA 1931 37 100.0 38 ..................................... GTGTACAAATATTCAATATTGGACCCTTTTTGTCAGTG 2006 37 100.0 36 ..................................... ACACCCAACTCAATAGGCTTTATTCCGAGTCTGACG 2079 37 100.0 36 ..................................... AGAATCCTTAGCGGCTCGTTTGATTGATACTTAAAA 2152 37 100.0 36 ..................................... GCCACCATCTATTAACCCAATCAACCTGAACGAACC 2225 37 100.0 36 ..................................... TTCAACATCAACTACAATGAAGAACAGGAGATTTTC 2298 37 100.0 36 ..................................... ATTACAAAAAACGGGATGAGCCGCCATTCTGATGGA 2371 37 100.0 36 ..................................... TACTTCCAATCGTTGCCTAGAATTTCATGCTTAGAT 2444 37 100.0 37 ..................................... GTGTATCTCCTCGCTTAGCCTAACAGCCTCTGTTAGT 2518 37 100.0 37 ..................................... TCGACAAGATTAGGGATATATAAACCTTGTGATCCAT 2592 37 100.0 36 ..................................... TGCATCGTTTGTATTCTCCAAAGAACCTGTGGTTAA 2665 37 100.0 35 ..................................... ACAAAAAAAATCATGGCCAAGAAAAATGTAAATAT 2737 37 100.0 36 ..................................... GGCGACTGGATAGGTTCGTCCACTGCCTGAACTACA 2810 37 100.0 40 ..................................... TAGGCAATGCAGGATTCGAACCTGCGTCTTAGGTATCCGA 2887 37 100.0 101 ..................................... GTTCCCCCGCTTTTTTAGCGCAGTCGTTGCACTAATCCAATACTAACGTCTTTTTAAAATACAATTAATTCCTACCCCGCAAAAATGCGGGGCGGTTCCCG 3025 37 94.6 0 ....C.........................C...... | ========== ====== ====== ====== ===================================== ===================================================================================================== ================== 40 37 99.7 38 CTTCGAATACCAATTTCCAGATTAGATGGATTGAAAC # Left flank : CGTTGCTCTAATTCAATACTAACATATTCTTAAAATGCAATTAATCCCTACCTCTATCAAAAGTCAAAGCGATCCCTGAGCGGAGCCGAAGG # Right flank : GTTCCCCCGCCTTTTTAGCGCGGTCGTTGCTCTAATTCAATACTAACATATTCTTAAAATGCAATTAATCCCTACCTCTATCAAAAGTCAAAGCGATCCCTGAGCG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:-0.13, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCGAATACCAATTTCCAGATTAGATGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.30,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : NA // Array 1 503020-502411 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGDT01000004.1 Dyadobacter jejuensis strain DSM 100346 Ga0180998_104, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================================================================================== ================== 503019 37 100.0 37 ..................................... CCCCTTCTGTGATGAAGTGAGTACGCCAACCTACACG 502945 37 100.0 101 ..................................... GCTCTCCCGCGTTTTTGCGGGATCGGCAAGCCAATTTAAATGCATATTCCATTGCTAAATAATCTGAAATCGCTCCCGCATCCTGCGGGATGGACAAGCCA 502807 37 100.0 38 ..................................... CGGAAAACTAGAGTTACCATTACAGTCAGTCGATTAGC 502732 37 97.3 37 .........................C........... ATGGGAGCAATGTGACCAATAATAACATATGGGCTGA 502658 37 100.0 36 ..................................... AAATACACACACTATGTCAGTAAGGGCAACAGATTT 502585 37 100.0 101 ..................................... GCTCTCCCACGTTTTTGCGGGATCGGCAAGCCAATTTAAATGCATATTCCATTGCTAAATAATCTGAAATCGCTCCCGCATCCTGCGGGATGGACAAGCCA 502447 37 89.2 0 ..........C.........A........T..C.... | ========== ====== ====== ====== ===================================== ===================================================================================================== ================== 7 37 98.1 58 GTTCAAAAGCTTAATCCATTGTCAGAAGGATTGAAAC # Left flank : TGAACTGAATTTTCTCCTTTTTGCTCTCATAGTTCCACTAATTTAAGATTAAAAATTAAATTTTAACAGTGGCCCTAATTCTGGGGAGTATTATATTCGGTCATAGTGTGTTATTAAAAAGGGACGTCGC # Right flank : ACCCTCCCACATCGACAAGCCACATAAAATATTTATGCCCTAAATTGCTACTCCCTAACACTCAATCCACCGTCCATTTCTCCAGCAACTTCTTGGTGGTATTCGCCACATAGCGATTGGGGTCCGATAAAAGTCTTTCCAAATTTTTATAAACAATAGGATTGGCCATGTTCGGAGCCGAAAATAGCTTATAAACATAACCCAAGGCTGTGGCATTGAGCTGCCCGGCTTGGTAGTAGCCCAGGAGTTGGATTAGCACTTGGTCGTATACAGTTTCGGCCTCTGCCAGTTTCCATAGCATGTCCAGCTTTTTTAGATCGTCCAACTGGGGTATCTGGTTTACGAATGCTAGTTGGCTTCCCTCCTTGCTGAGAGCCTGAGGGTGTATCGCTTCCATCGCCAGACTGGCCACTGTTTCGTTTGAGGAGGTCAATTGGGTCAATAGCCGATCGAAGAAGGGAACGGAATTCCCAGGATGATCCGCCACGTAGCCCAATGCC # Questionable array : NO Score: 4.04 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:-2.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAAAGCTTAATCCATTGTCAGAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.60,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 1 1-1482 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGDT01000058.1 Dyadobacter jejuensis strain DSM 100346 Ga0180998_158, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 1 36 100.0 37 .................................... TTGACAACAATATCTTTCAATGTACCAGCAAAAGGAG 74 36 88.9 36 .................G.G.A.G............ GATGCTGAGAGACAGCAAATATGCTGCCGAGAAGTA TCGGACTGGCGGACC [96] 161 36 100.0 36 .................................... GTTTAAGCTAGAATGGAGTGTGTCCATTCAATACGG 233 36 100.0 38 .................................... GATGACAGCCAAGGCAATATGTACATAAGTGGTGTAAA 307 36 100.0 40 .................................... GATATGGGAGTATAACGCTATACAAAGACAGTCCAGTGAA 383 36 100.0 39 .................................... GTGCATAAGACTTTTCCGTCTATAAAGGAATTTTACAGT 458 36 100.0 39 .................................... GCAATAGCAAATCTATTTCTTTCCATGCATCTAAAAAAG 533 36 100.0 37 .................................... GTGCGGTTGAAAGCACCGTTAAAGTTAGCTCCTAACA 606 36 100.0 37 .................................... GCAGCCTTGTAAAGTACATCAACAACAAAAGAGTCCT 679 36 100.0 39 .................................... GTTAAAGACAATTGGGGATTATTATACCTCGGAGCTGAA 754 36 100.0 39 .................................... GGACAGATGTGTTGATCATAAGTTATATTACTAACAGTT 829 36 100.0 41 .................................... GCGTAGACTCTACTATGAACACATGGTTCTGCAACGTGCAG 906 36 100.0 38 .................................... GACAACACAAACAACATAAACACCGCCTCGGGTGTAAT 980 36 100.0 37 .................................... GGTCATTTATAAATATCATGGCAGCAAAAGGAGTAAA 1053 36 100.0 37 .................................... TTGACAACAATATCTTTCAATGTACCAGCAAAAGGAG 1126 36 88.9 36 .................G.G.A.G............ GATGCTGAGAGACAGCAAATATGCTGCCGAGAAGTA TCGGACTGGCGGACC [1148] 1213 36 100.0 38 .................................... GAAGTTTCCCCTAAAGACCTAGTGTCCTCCATGAAGAA 1287 36 100.0 37 .................................... TTGACAACAATATCTTTCAATGTACCAGCAAAAGGAG 1360 36 88.9 36 .................G.G.A.G............ GATGCTGAGAGACAGCAAATATGCTGCCGAGAAGTA TCGGACTGGCGGACC [1382] 1447 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 20 36 98.3 38 GTCTTAATCCTTGTTATCGTGGAAGTTGGTTGCTGG # Left flank : | # Right flank : G # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTATCGTGGAAGTTGGTTGCTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [16-32] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 7239-9883 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGDT01000007.1 Dyadobacter jejuensis strain DSM 100346 Ga0180998_107, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 7239 37 100.0 37 ..................................... TAGGTGTCGGTAATACTAGTTGCGTGCAAGTGATTTA 7313 37 100.0 36 ..................................... AACATCTTGTATGTGGCATCGTCAATGTCGATTTCC 7386 37 100.0 34 ..................................... CTTTAGGTGCTGCCATATCTATTATGTTTAAAGT 7457 37 100.0 38 ..................................... AAGGGGAGGGAGCCTCCCCTTATTTTTTATTCGTGGTC 7532 37 100.0 35 ..................................... TTTGAGGGCGTCCCCTACCGAAATAGGTTCATTAA 7604 37 100.0 37 ..................................... GGGAGACCTATTAGTACCTAACGAACTCGTTAGGGAT 7678 37 100.0 37 ..................................... AAATCCCCTCGTATTTGAGGATGAATTTTTCCAAATG 7752 37 100.0 36 ..................................... CATCTAGCAGCGTTTGAATATCTTTAACTACTTCTA 7825 37 100.0 36 ..................................... TATATTGTAGTCATTTTAAAAGAGTTTGTGGTTAAT 7898 37 100.0 36 ..................................... TCTTCTTGATTTTCTAACCAACGTGTGGATATGTGA 7971 37 100.0 36 ..................................... CCCACCACCTGAGTGGTTTGAGTTAATCTTGGTACT 8044 37 100.0 35 ..................................... ATAGACGTTGTTAGGAAAATTAACATCATAATGAC 8116 37 100.0 37 ..................................... CAAGTATGAATTTTTTCAAACTCTTCGGAACTCATTT 8190 37 100.0 39 ..................................... AGTATCATGTATAGGGATCCTTCGAAGATCCCTTGCATC 8266 37 100.0 38 ..................................... CTACCGGATGTACGTGACGGTTTGAAGCCGGTACATAG 8341 37 100.0 38 ..................................... GCCGCTGAATAGCCAATCTGGTGTTTCGTTTGGTTCCA 8416 37 100.0 37 ..................................... ATGGTAACCGAAGTTCCTTGCTTAATAAACTTTACTT 8490 37 100.0 37 ..................................... GGTTATAAGATAGATACTGTTATGCAACAACACTACG 8564 37 100.0 40 ..................................... TTTCTCGACCACTTTCTTGGTGAAGACCACGTGGCGGCCT 8641 37 100.0 38 ..................................... CGTTGTGTTGGTTAGCATAATCTTGGTCCCCAAGATTA 8716 37 100.0 35 ..................................... CTTCTTTTGTGAAAGACCTAAACTCACCCCGTAAT 8788 37 100.0 38 ..................................... CCGGGTGATTAAGGATATATTCAGACTCCTGCCTGCCT 8863 37 100.0 41 ..................................... CAGCGATTTCATTAAGCATAATACTACAAATTTAAAATTAA 8941 37 100.0 35 ..................................... TACGTCGCCTTTAGCAAGGCGGCTACAGACATAGT 9013 37 100.0 40 ..................................... CACTAAACTCGAACTTATCCCAAAATTCGTCCGAGCTTAT 9090 37 100.0 36 ..................................... TCGGCGTGAAATGTTCCGCCGTGGGTGATGATTTTG 9163 37 100.0 40 ..................................... TTTGAGGAAGCTTTTAACTCCGATACTCCATTATGGAATG 9240 37 100.0 40 ..................................... CTTAACCAGGTCCTTACGCACCGCACTTTTGTACGCGCGC 9317 37 100.0 42 ..................................... CCTTCTGCGTTTCGGAGCCTCTTCAGCTTTAGAGGCTTCTTC 9396 37 100.0 35 ..................................... AAAAATTTGTTTTTCGCCCCCTTCATGGACTCGAA 9468 37 100.0 36 ..................................... ATAGTTGTCATAGTAGTAAAGATTTATGAATAAGGT 9541 37 100.0 35 ..................................... TACTTCTCGGCAGCATATTTGCTGTCTCTCAGCAT 9613 37 89.2 36 .............C.T.C.C................. CTCCTTTTGCTGGTACATTGAAAGATATTGTTGTCA GGTCCGCCAGTCCGA [9628] 9701 37 97.3 37 A.................................... CCCTTATGGTTCTACCTTCGTAAACTGGAGTTTCCAC 9775 37 100.0 35 ..................................... CTAGTGCGTATTTCTTAGCATTCGTGATGCCGTAT 9847 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 36 37 99.6 37 CCCAGCAACCAACTTCCACGATAACAAGGATTAAGAC # Left flank : GGCGCAGTATTTTGTGGACGCGAATATACACGGTGGATTTTCCCTGGCCCATGTTAAAGAAACCCTGGTCATTGGAGACATGGTGCGCCTACATCTAGAAAAAATAGATAAGGATGATCAAAGTTTTTATAAGGTGAAGCGGGTAAAAAAAACCTCCGAAAAGCCTGCATCGATACACCGCAAAGCCTTTGTTGGGATACCCAAGGCATTGGGCCGATTGGTATTAATAGAGGATGTACTAATACCCCGCCACATGGCTGAAGGTATGAATCTTCAAAAATCCTATTCTGGAACGGCGCTAGTCAGCTACGATTATACCCGAAAAAAATGGGGCTGGACAGCCCTAGAAATAAATCCGCTATAGCTTTAAACTTTACCTTCAATTCCTTAATTTTAAACAGCGTATCTATTTTTCGATTTAAAATTTACCATTTTGAATATTAATATTTTAATATTTACCACCCTAAACAACTCAATAACAATAAATTACAAAAACAGCT # Right flank : CTGATAGATGACCGACTGCGTCAGCATCGATCGATACCCAGCAACCAACCTGGTCCGCCAGTCCGATCCCCATAACAAGGATTAAGACATTACGCTTCGACTCCGCTCAGCGTACGAGACGTTATCCCAACAACCACCCTGGTGCGCACCGGCCGATATTGTTTACAACAATCATAAAAAAAGAAAAGGCCAAGCCGAATGCCGATAGCCGACAGCCGTATGCCGCCCATCAACCTGGTCCGCCAGTACTAACCCCATAACAAGGATTTAGACATTACGCTTCGACTCCGCTCAGCGTACGGGACGTTATCCCAACAACCACCCTAGTGCGCCAGTCAGATATAAATTACAACAGTCATAAAAATAGAGAAGCAAAGCCGGTAGCCGAAAGCTGACAGCCGACAGCCGCTCATCAACTTGGTCCGCCAGTCCGATCCCCATAACAAGGATTAAGACATTACGCTTCGACTCCGCTCAGCGTACGAGACGTTATCCCAACA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCAGCAACCAACTTCCACGATAACAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 1 236758-240101 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGDT01000008.1 Dyadobacter jejuensis strain DSM 100346 Ga0180998_108, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 236758 37 100.0 39 ..................................... CCATTACCTCTATGCTGTACAAACTCCTGTTTTTCACAT 236834 37 100.0 36 ..................................... GTAAGACTCGTATACACTTGTATAATTATGTGTTTT 236907 37 100.0 35 ..................................... GTACATATCGTCATAAACACGGTTGTAGTCGTAAT 236979 37 100.0 37 ..................................... CGCAACTGGTTAGGTAGTCTCCTTGAATGATCATTTT 237053 37 100.0 36 ..................................... TCAATAGGAACTCTTTGGGTTTTCTATGAACATATA 237126 37 100.0 36 ..................................... GGTTTGCTTTTCCGCTATTATAGTCGTTTTGATTCT 237199 37 100.0 36 ..................................... TAGAAGGTGCTCCGACAATGAGTAACCACCCAGCTG 237272 37 100.0 36 ..................................... AACAATGAAAACTAAACAGGATAGACTCAAGTATCT 237345 37 100.0 36 ..................................... ATATCCTCTTTCAGGTCGTTACCAAAAGATTCTTCT 237418 37 100.0 37 ..................................... GAGGCTCATTGAGTGATGAGTCGGTCCATGATAGAAC 237492 37 100.0 36 ..................................... CTCAGTGGCCGGACTAAACTAACCTCATACCCTTCT 237565 37 100.0 37 ..................................... CGTCCGATATGGATGTGATGCCAAGGGAAACTAGAAA 237639 37 100.0 38 ..................................... TAAATAAGTACTGATCGTGATTTTCTGGCTCATACCAT 237714 37 100.0 36 ..................................... GTCCCGGATCGTGGCGGCAATAAATAGCGCATCCCG 237787 37 100.0 37 ..................................... ATATGGACTCAACGGGCTTTTACACCGGCGGGGAGTT 237861 37 100.0 36 ..................................... AGCTTTTTTGGAAAGGTACTGGACACTTCCGGTTCA 237934 37 100.0 36 ..................................... ATTAGCACCCATGAGTTGGTTGGCCCCGTGTTGGTT 238007 37 100.0 36 ..................................... CGACGTCAGTGAAAAAAGCAATTAACGGAGATTATC 238080 37 100.0 36 ..................................... ATCGATTTTATTGAGCAGACCAAAGACCTAATTAAT 238153 37 100.0 37 ..................................... CAATTTCGTTGCGTTCCTATCTTCGTGTAAGACTGCA 238227 37 100.0 36 ..................................... CGACATCAGTGAAAAAAGCAATTAACGGAGATTATC 238300 37 100.0 36 ..................................... TAAGTATATTACACACTATGGAAGTTACAAAACTAT 238373 37 100.0 36 ..................................... GGGCTTAAATTCAGAATTGGCAATACGATCAAATAC 238446 37 100.0 36 ..................................... AAAGCAACTTTCGGAGTTGCTAAACTATGGGAGAAA 238519 37 100.0 37 ..................................... GGGGCCAGCCAGCGCCAAACGTCCCCAGGCTTCGCCT 238593 37 100.0 39 ..................................... ACGACAAAATCCAAGATAGCATTATCGATATGTATAAGA 238669 37 100.0 37 ..................................... TTCACTCAATCGCATCATTTTTTCAAATGGGTCTTCT 238743 37 100.0 37 ..................................... GGCGTTATGGAGCGAGGAATTACCTTCAATTTTCCCT 238817 37 100.0 36 ..................................... TCGGGCTATTCCGAAATCAAGGAGGCGGAGTATATT 238890 37 100.0 36 ..................................... GGGTACTCAATGACAGGTGAATTCATTGGAGTGACA 238963 37 100.0 39 ..................................... AAGTAACCTCATGCCAGCCATCGACATCCAAAATCCGCA 239039 37 100.0 38 ..................................... CTCCCGTCATTCATATATGGGACCGGGTCTGTAATGCA 239114 37 100.0 35 ..................................... ATCTTCCCAGTGTTACTATCTTCTATACCATCCCT 239186 37 100.0 37 ..................................... GTAATCCAGCCCTAACCGAATATTTTCAGTAATCAAG 239260 37 100.0 36 ..................................... CTGTTGGTAAAGGCTACCATCTTCTTTGTAGAACGA 239333 37 100.0 37 ..................................... CTTTAGCATGGTTTTTTGATCTTCGGTCATAGTGTGT 239407 37 100.0 36 ..................................... TTGGTTAGTTATTTTACAGGGCCATGAAAGACGAAA 239480 37 100.0 37 ..................................... ACTCTTTGGCTCTATGTAAGGGCACTGTCCATCCTGA 239554 37 100.0 36 ..................................... TTTTTTGATTACTAAGAAAACTATTACAATCGCTGC 239627 37 100.0 36 ..................................... CTAACTCATTGTCTATGTAATAATTGAAATTGATGC 239700 37 100.0 38 ..................................... ACGAAAACAAAACCATGAAACAAATAACACTAGAACAA 239775 37 100.0 35 ..................................... GGCCGGAGACTTCGACGACGCTATAGAATTGATAG 239847 37 100.0 36 ..................................... GACATCTAGAAAATTGATAAAAGAAGCCCGCCCGGC 239920 37 100.0 35 ..................................... TTATAAACAAATTCGAGGGAAAAGCGAACAGAATT 239992 37 100.0 36 ..................................... AGAAAGAGCGACAGACGACCGTAGAAGGTGACAAGG 240065 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 46 37 100.0 37 CTTCGAATACCAATTTCCAGATTAGATGGATTGAAAC # Left flank : CCCCACTGGATTACAAATTCGCTGAATACAAAAATAAGGTCTACGACACCTATAAGACTCAGCTATACTGTTATGCTTGGTTAATTGAGCAAAATTTTGGAAAACCGGTGCACAAAGGATTTTTGGTATATACTAGGAGTAGGCATAAAGTAATAGAGGTACCCATCACTGAAGCGGATAAGGATGGGGTAAAAAAGGCGGCAGCGGACATTTTTGCCATTATAGAACAAAATCATTATCCACGTGCTACCAAATATAAGGCGAGATGTTTATCTTGCACCTACAAAAATATATGCATCAAATGACGTTTTCCGGCCACCAATTTATTTTAGAACAGGCAAAAAAGGAACATAAAAACCTGACTAACAAAGCTTTAAGCTTACGGAATACGAGCATTTTAGATACAAAAAACCGTTCATTGACCTATTGTAAATTTAAAAAAGCGGAACAGAAAAACTACCCTTACCTATTGGTATTCAGAAAGATACATAAAAATACGA # Right flank : GTTCCCCCGCTTTTTTAGCGCGGTCGTTGCTCTAATTCAATACTAACATATTCTTAAAATGCAATTAATCCCTACCTCTATCAAAAGTCAAAGCGATCCCTGAGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCGAATACCAATTTCCAGATTAGATGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.30,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA //