Array 1 216629-217783 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAATEP010000012.1 Nonomuraea sp. FMUSA5-5 12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 216629 30 100.0 35 .............................. CGCTCGACGGTGGGCCGTTCGGCGGGGGAGTCCCA 216694 30 100.0 38 .............................. GGGATGGTGCGTGTCTGCAGGGTGACGATCTCGGCCTC 216762 30 100.0 38 .............................. CGGACAAGAAGCTGCCCAAGAAGAAGAAGCGGCTCGGC 216830 30 100.0 34 .............................. TCGCAGGTCGCGGGCGGGAACGTCCCGGTTCCGT 216894 30 100.0 35 .............................. CCGCATCAACGCCCCGATGGGCGTGGACGGCAACC 216959 30 100.0 36 .............................. ACGGCAGCCAGGAACCGGCCACCGCGATCCGCCGGG 217025 30 100.0 39 .............................. ATGTCGCTCATCACCGACAGCGCGGGCGTGGCCACGAGC 217094 29 96.7 37 ......................-....... ACCCGGCCTTACCCGTGATTCCCGCAGCAGCCTCAGC 217160 30 100.0 38 .............................. GTGAGTGTCGGGACGGGGACGGGATCGGGAGGGGCGAC 217228 30 100.0 35 .............................. AAGTACACGTACATGCTGAGCGTGTACGTGCCACC 217293 30 100.0 37 .............................. TCGAGATCGTCGAGGACGCGCCCGGCTTCCGAGGCGG 217360 30 96.7 34 ...............A.............. TCGTGCGCCTTCACCGCGTCCGCCGCCGCGTCGC 217424 30 96.7 35 ...............A.............. CCGTACGTGGGCGGGTAGAAGAGTTCGGGATCTTC 217489 30 100.0 36 .............................. GAGGAATGTACGAACCGGAAGCGCCCGGCGAAGGAG 217555 30 100.0 40 .............................. TGGAAAGATGCGGCCTTGACTACTGACCGTAGATCAGCTT 217625 30 100.0 34 .............................. ACCAACGCCAGCCAACCGCCGGACGGCAGCAGGC 217689 30 100.0 35 .............................. CGCTCAAGGGCGACAGGAAGCCCTACGACTGGGCG 217754 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 18 30 99.5 36 GTCCTCATCGCCCCTGCGAGGGGTCTCAAC # Left flank : CCGTCATTTGACCGTGAGCGCTCGCCTCGCGACCGGGCAGGGCCGTGTTCAAGTTTGTTCTGTGAGATCTGTGTGCGAGCCATCATGCTCGTCGAGCGGCTGAGTAGCCTGAACTCGGCAACGGCTCAACCTGGTAGATCCTGGGACATGTGGCGACCCTTTGAGGGCGCCTTCCCCCGGTGCGCTTCATCACCGTGATGGTTCGACAGCGGACAGTACTCGCCAGCTCCGGGAACCAAAGTGCTTCATTTTCGCTGTCCGTAGCGCTTCCGAGCCTTGCAGGGTGACAGGCGGCTGGGTGATGGGAAGGCTGCACTTGCGAATGCCCTTGGCGATGAATGAGCGGTGCAGTCCTCAGTGCTTTCTTTAAGATCGAGGAGGCTTGTCGATCATGATTTTGCAGCAGACCTACCGGGGTTCCTGCATTACCGGAGGTTCGCTGCAAAACTCCATCCTGGAACGTGTCTCTTGTCACGCTCTACCTGCGGCTTTATGTTGGG # Right flank : CAACCCGTCTTGCGCTTGCTTGTACTCGGCGATCACCGCCTTGGCGCTGGGCCTCATCCGCGAGCGCCTGGCGTTCTCGCCGCCGCCATCAGGAAGATGAGGATGGGTATCCAGACGCAAGGGAGAGCTGATCACGTCCGATACGCCTGGAGACGCAACCGATCTACGAGTTGCTCGTGATGGCAAACAAACTTCTCCATGCCCGGCGCGTTCATCAAATGGCGAGGGCCCGGCTCTCGGCGAGCTCGGGCCCTCGCGTGAAGGTTCTATCTGTTGGTGCTCATTCCTAGGAGCGTGTCGAGAGTGGCCCTGTCTGTACCTAGTAGCACGAGCAGTTCCAGAGTGGGCACACGGTATGTGTCACCCGTCTTGATCACCCGACAGGGGAACTCGCCACGATTGACGAGGCGATAGGCCGTGTTACGGCTCAGGCCCAAGGCTCTGGCGGCTGTGAGGAGAGGGATCACGGCTGGCAAGGCCGTCACCTCCGCGAGCGTAAG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTGCGAGGGGTCTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 1 343-44 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAATEP010000078.1 Nonomuraea sp. FMUSA5-5 78, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 342 30 100.0 40 .............................. CGGACGATCCGGCCGCGCAGGGTGAACGTGCGCTGCACCG 272 30 100.0 35 .............................. GCCCGCAGCACCTCTGGCCTCACGTCATCGTGCTC 207 30 100.0 38 .............................. GCAGTCAGGGAGGCCGGTACTGGTGCTATGCCGGCCTC 139 30 100.0 36 .............................. TCGATCGGGCCGCCGCGCGACCCTTCGGCGGCGGGG 73 30 96.7 0 ...............C.............. | ========== ====== ====== ====== ============================== ======================================== ================== 5 30 99.3 38 GTGCTCATCGCCCCTACGAGGGGTCTCAAC # Left flank : ACGTGGCCTACGACGAGCTCCTCTACCTGGAGGCGCTGCAGCTCACGCGTCGTTGCCTGGAAGGCGTTCCGTACAAGCCGTTCAAGATCTGGTGGTGACTTGGCGTGTACGTCGTGGTGGTTTACGACACCCTAGCCGTCCGGAACGCTGCGATCCTGCGGTTGTGCCGGCAATACCTGCACCACGTGCAGCGCAGCGTCTTCGAGGGCAGCCTCAGCGCGGCGCAGCTTCGCAGGTTCCACCACAAGGTGACCGAAGTGATCGACCCTGGGTACGACAGCGTGCTGGTCTTCACGTTTCCGCCAGGGACTACGCCTGAGCGACAGGAATGGGGAGTTGGGCAGCCCGCTCCCGACGACATTCTTTAGTATGAGGACTGCGGAATGATCATGGCCGATTGCAGCGAACCTCCGGGGGTTCTTGCACTACCGGAGGTTTGCTGCAAAAGGCATCTAGGATGCCGCATGAATAAGCCTCCTGATCTGCAGCTTTATATTGGG # Right flank : CGCGATCTTGGCGGCGGCGCGACGGTGGACGCCGGTGAGGTGTT # Questionable array : NO Score: 3.02 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCATCGCCCCTACGAGGGGTCTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 2 8701-9669 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAATEP010000078.1 Nonomuraea sp. FMUSA5-5 78, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================================== ================== 8701 30 100.0 37 .............................. CCCTCGACGGCCGTCTTCACCCACACCTTTGTCCCGG 8768 30 100.0 36 .............................. CCGTACAGCCCATAGGAGACGCCCTGGATGTAGCCG 8834 30 100.0 34 .............................. AAGCCTCTCCAGCCTTCTCTCGACCTGTTCTCGG 8898 30 100.0 36 .............................. CCGACCTGGACGCCGCGCTCGCGATCGACACGTCGA 8964 30 100.0 36 .............................. GTCTTGACGGGGACGGCGTTGTCGCCGGGGGCGCGG 9030 30 100.0 37 .............................. AGGGTGGCCGGGGCGATGTGCGCGTCGCCGGTGATGG 9097 30 93.3 36 .........A..T................. ATAACGCTCACTGGGCACCGCCTGTCTGAGCCTGAG 9163 30 96.7 36 ..T........................... GCGGGAAGGTGTTCGAGGAACGCCTGGAGCGGATGC 9229 30 96.7 36 .................A............ GCATGAGTTGGCTAGCCGCATCAGCGTGCGCGGCGT 9295 30 100.0 34 .............................. GAGGCGCTGGTCGGGAACGGAATCGTGATCCGGG 9359 30 100.0 36 .............................. CAGATGGTGCCGTCAGCCCAGCCCTTCGAGCAGGCG 9425 30 93.3 38 .C....................A....... ACATCGACTTTCGGCTGGACCGGCTGGTTCAGCTTGTC 9493 30 100.0 33 .............................. CGAGCGGTCCACGCCTGCCAGCGGGTGGGGCGA C [9500] 9557 29 93.3 53 .....G.............-.......... GCAATCTGCTTCCACTTCGGCGGCGCGGTGTCCGCAACATCCGCACCAGCCCT 9639 30 73.3 0 ACT.....G.G.....T........C...G | G [9663] ========== ====== ====== ====== ============================== ===================================================== ================== 15 30 96.4 37 GTCCTCATCGCCCCTGCGAGGGGTCTCAAC # Left flank : CGTACTTCCCTCGCTGCCGCTTCGCGAGGGGGAAGACCGGTGCACCATGCCCGATCGGGACCATTCCGTACGGCGCCATCCCGCCGTCATGGAAGTAGCGGCCGACGACGGGATTCTCGCGGTCGAGAACGTCGTAGACCAGGCCCCTGCCGGGCGCGAGCACCATGTCCCACGGGATGTCGGTGGCGGTCGTACTGACCTCTACTCGTACCCGCATCCTTGCCTCCACGCTCTTCTTCGTCCTTCACTTGATACAGATGGACGAAGAGCACGGAGGACTCGGCCCTGAGGTGAGTTATTGCAGGTAGAGCTATACAGGGAGCACGCTGGAGATCATCCATCTATGGTTATGTGGCGACACGCACCTCGGCAGAGGCGAAGGTCAGCGATCATGGATGTGCAGCGAACCTCCCAGGCTTTCTGCGCAACCGGAGGTTTGCTGCAAAACAGCTCGTTCGATCGTGCTTCTTGTCGTGTTTGACCTGCGGCTTTACATTGGG # Right flank : GCGCTCCAGAGAGGGGCGGGCCTCGGAAGGAGCGGGCCTCATTGCCCTGAGGCCCGGGGGCAGTGCAACGCTTGGCCTTTCTTCGCGCTCGTCCCTTGCCTCGTCCATCTGTAGTTGATGGAGGGAGAGAACGGTGAAACACGAATGGCATCGCCCCAGAGGGTCGGGAAGCACGAACGCAGACTTCTTCCCCCTCATACGGCTGAGCAGCCGCTTGAAGGAGCCTCTGACGTCAGAGGAGGAAGTACGGGCGGGGAAGTTGGCCAAGGTGATCGAGGAGCCGGAGTTCGAGGCCGACCGCGAGGGGCGGGCGATCGCGCTCATCGTGCACTTGTCGGACAACCCGCAGATGGTGGCCGAGGCACTGCTCGCCGCTCGACAGGGTTGTATCGATACCCGCGGCAACGAGGAGAAGTGCCGGGCCGCGCTCGTCATCGACGGTGGCTCAGCGAACATCCCGGAGACCAGGCACGACTTCGAATTGGCGGTGCGGCTGATCT # Questionable array : NO Score: 3.04 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTGCGAGGGGTCTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 22162-23910 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAATEP010000078.1 Nonomuraea sp. FMUSA5-5 78, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 22162 30 100.0 37 .............................. ATGAAGTGCGGGCACTCGCTGAGACGCTGGCAGGAGA 22229 30 100.0 37 .............................. GTGGAGGGGCAGCAGCAGGCGGCGGCCACGTTCGCGC 22296 30 100.0 34 .............................. ACCTCAACCTGACCGGCCACTACCGGTGTGCGCG 22360 30 100.0 34 .............................. AACGGGCCCGTCAGCGGCTCGCGGAGGTCAACGC 22424 30 100.0 36 .............................. GCGCTTGAACGGGTTCCACCGACGCGGCTCCGGGAC 22490 30 100.0 36 .............................. ACCGCCGCGAGGCCGACTTGGCGTACAGGCAGGCGC 22556 30 100.0 35 .............................. TCAAACGCGCGTGAGCGCGCGAAGGTCACGCCACA 22621 30 100.0 35 .............................. ACGGAGGGGCGGGGGCCGCATTCGTGCTGCCCGGG 22686 30 100.0 36 .............................. TACGGGTTCGGTGCGTTCAGGGAGTCGCCACGCCTC 22752 30 100.0 35 .............................. CGCGGGGTCATCGTTTCGCGTGGGGTCGGTCACGC 22817 30 100.0 36 .............................. GGCAGGTCTTCCCACGCGGGGCGGGTTGTGCGGGCG 22883 30 100.0 35 .............................. GCGTCCACCTTGACCTTGCGGTCCTTGATGTCCTG 22948 30 100.0 40 .............................. GGCGCCATCAGGGCCCACAGGACGGCGAGCTGCTTTTCGA 23018 30 100.0 38 .............................. CCGTCCTGCTCGGCTCCACCGAGAAGATGGGCACCGGC 23086 30 100.0 39 .............................. CCTTGTCGTGGCCGTCCCACAGATCGCGGATTACGGTGG 23155 30 100.0 38 .............................. GCGGTGTTGGTGCCGCCCATGTTGCCGAACCGCTCGAG 23223 30 100.0 39 .............................. TGGCGATCGGGGCGGACATCTACGTGGGCGACCGCGAGA 23292 30 100.0 34 .............................. CGGCCTTCCCCGCCATGTTGGCCACCCGGCCCTG 23356 30 100.0 35 .............................. ATCTCACGCGCCCAGCCGGGCCTCTTCTCGTCAAG 23421 30 100.0 36 .............................. TGGTCACGACAGCCTCAGCGACATGGCGAGGTGCGC 23487 30 100.0 38 .............................. ATGTACTGCCGGTACAGGGCCACCGCGAGCGTGTGCCC 23555 29 96.7 38 ..........-................... TCGACGGGTTCGATGCAGCGGACGGGTAGTACGAGCGG 23622 30 100.0 37 .............................. AGCAGCTGCCGCTTCACGGGCCTGGTACGTCCTTCAC 23689 30 96.7 33 ................G............. GGTCCGGCCCGTACACGGCGGTGTGGATCGCGG 23752 30 100.0 37 .............................. CGGGAGCCGATCAGCCACTGCCCGTCCGGCAGGAGGA 23819 30 100.0 32 .............................. GCGACGGCTCCCCAGTCTTGATCACGAATCCC 23881 30 96.7 0 ............................T. | ========== ====== ====== ====== ============================== ======================================== ================== 27 30 99.6 36 GTCCTCATCGCCCCTACGAGGGGTCTCAAC # Left flank : GCATGGAGACGCTTCGGCTGGCGCATCCCGACTTCTACTGCGCCAACGTGATCACATTCCTGTACTCCACCGAGGAGCTTCCCGATTCGGTTGAGAGCACCGCCCCCACACCCGAAGACGTGATCATCGACCGCGAGAACGCGCGGCTCGCTCGCCGGACGCTCAGGGCGCTGATCGGCAACGGCGCAGCACAGCGCTCGCAACAGCACTACCGCGCGTTGCTGAGGGACATCTCCGCGACCGTCCTCCCCAGCGGCCCGCAGCTGCTTGCGTGGGTGGCGCGAAGGTTCGACATTGACGAGAACCTCGCTGAGCTCTTCCTCCGAAGGCTGGTCAGGCTGGCGTTCTCGGCCGGATTGGACTGGGTCGCTGACAACTGTGCATGATCCATTGAGATCTGCAGCGAACCTCCGGGGGTTTCTGCACTACCGGAGGTTCGCTGCAAAATGCCATGTTCGGAGCCGCATCTTGCATAGGCTGGCCTGGGACTTTACGTTGGG # Right flank : CAGGGATCGCCTAGTCCGCATCCTCACTGCGAGGAGTGGTCTTGGGCTAGATCCGCTTCAACGGAGGGGTGGGTGGCCCTCGCGGTTTCTCCATCGTGGCCGAAAGCCTTGCCGCAGGCCGGTGAGCTGGATTTTCGTCATCCTTGGTGCGACCGTGGGCTGGTCACCGAGTATCCGTTCTCACAGTAGGTGGTGATGCCTCCTCGCAGGGTGGCGAGCGCCGCTTGCACGCGCCGCAACACGTAGGGCCGCAGCATGCCTGCCATTTCGGCTGGAGCGGTGAAACGGAAGTTCTGCAGCTCGGAGTCCACGATCTGCAGATCCGCGATCTGCCCGGCCTCAAGTACTCCGCCGTCGAAGATGAACATCAAGGAGTCGTCCCAGGGACCGTGTGGCGGCACCCAGTCGACCACGAGAGCGGGACCGATCTCGAGGTCGAGTCCGAGTTCTTCCTTGACCTCGCGCCGAGCGGCGGCGGCCGGCGGTTCGTTGCTTTCCGC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACGAGGGGTCTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //