Array 1 2074289-2075458 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058331.1 Pseudomonas aeruginosa strain ACR22 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2074289 28 100.0 32 ............................ TGCCGGTAGCAGGGCATCAACAGACCAAACAC 2074349 28 100.0 32 ............................ GTCGACGTCGATGAACGCCGCGCACGGATGGA 2074409 28 100.0 32 ............................ TTGCTAAGCATCCACTGTGCCGCTCCTGTAGC 2074469 28 100.0 33 ............................ ACGTATCAGGCATCGTACTCGGCAAGGTGTTCT 2074530 28 100.0 32 ............................ TGCGGAAGGGGCCGGGCTGGCGCTGGCACCAG 2074590 28 100.0 32 ............................ TTGATGGCGTTGACCAGCTCCTGCACCTGGTC 2074650 28 100.0 32 ............................ ACGAAGTGACCGTGGTCCGCCGACAGGGAGGC 2074710 28 100.0 32 ............................ ACATGGGAATGCTCTCCTGGCACGAAGAAACG 2074770 28 100.0 32 ............................ GCCCGCTGGGGAAGCCGCAGTTATCCGGAGTA 2074830 28 100.0 32 ............................ AACCGCAGATGGCGCTGGACCGGGGCGTGCCG 2074890 28 100.0 32 ............................ AGGTTGACCAGCATGGCCGGCATCGACAGCGT 2074950 28 100.0 32 ............................ TCGGACAAAGACAGCCTCCGGTCATAGGGTAG 2075010 28 100.0 33 ............................ ATGCAGCCAGGGCTTACTCCGCTGCTGCTGGAC 2075071 28 100.0 32 ............................ TTGAGCTTGTCGTTGTACTCGTCGAGGCTCAT 2075131 28 96.4 32 .............T.............. ATACTGACTCAGCCAGGGAAAAGTCACTTGGA 2075191 28 96.4 32 .............T.............. AGCGTGCCATGGCGGCGGTAAGTCAAACCGTT 2075251 28 96.4 32 .............T.............. TCGGCGAGGCGATCGATCATGCGAATCAGCAA 2075311 28 96.4 32 .............T.............. ATCGACCACGACAGTGCTTCCCTGGTCTATTC 2075371 28 96.4 32 .............T.............. ATTGGCCGTGCAAGGTCCACCAGTCGATGCTT 2075431 28 96.4 0 .............T.............. | ========== ====== ====== ====== ============================ ================================= ================== 20 28 98.9 32 GTTCACTGCCGTACAGGCAGCTAAGAAA # Left flank : CATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCAATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCCGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGTTGCATCGCCCATCACAAGACCTTTCGCGCTCGAACGGCGAGGCTCACCGCCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGTTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : ACTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGAAAGGCGAAACAAGAGGCCAAGGCAAGCACGACGCCCGCTCAAGCGCTAAGCAACAGCTTCCCCCCTTAGTGCCGTGCAGGTAGCGACGGGAGCTGGGGGCCAGTGCACGCATTCACGGCCCGCCAGGCAGTCCCCGTGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTAAGAAA # Alternate repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 4892322-4890890 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058331.1 Pseudomonas aeruginosa strain ACR22 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4892321 29 100.0 32 ............................. GGGCTCTCGAGATCCTGATTGACAGGCACCGC 4892260 29 100.0 32 ............................. ACAAAGGGCGCGCGCGACCAGCTTACGGCGGC 4892199 29 100.0 32 ............................. GCGGAGATCAGTATCAGCACAGACTGGACGGA 4892138 29 100.0 32 ............................. AAGGGGCGGCTCTTCAATTGGCAGGTCGAGAT 4892077 29 100.0 32 ............................. CCGGTGCTCGCGCCGGCGCTTGCGGGCCTGCC 4892016 29 100.0 32 ............................. TGGAATTGAGCGCCGGCAGCAGAACGGAACCG 4891955 29 100.0 32 ............................. AACTGGGACGTTCGCAGCCCCATGATTTCCGC 4891894 29 100.0 32 ............................. TCGTTCGGCTCGTTGAATGCCACGGCAATGGC 4891833 29 100.0 32 ............................. TTGTTCCTATGAAGAAGCGCGAGGACCGATAT 4891772 29 100.0 32 ............................. GTTAATCAGGACCGGCCAGCATCGCATTTCCC 4891711 29 100.0 32 ............................. CCGGCACATGATGGAGAAAACCGATGTACCCA 4891650 29 100.0 32 ............................. GTAGGCGACTTCCTCAATACCGGCGGCGGAGC 4891589 29 100.0 32 ............................. CAGCGGGCCACCTGGCTGCAGTTGCTGACCAG 4891528 29 100.0 32 ............................. ACCTTTCCGACGACGCACTGCGCGTTGATATG 4891467 29 100.0 32 ............................. CGAATAAGCAAGCTCGATGCCGCCTAAGAAGC 4891406 29 100.0 32 ............................. GACTTGCGCAGGTTCGAAAGCGGTGTGCTGGA 4891345 29 100.0 32 ............................. AGCACCGAGGTAGAGGTGGCCATCTGTCGGCC 4891284 29 96.6 32 ...................A......... CACGACGTAGAGACCATGGTCCAGAACCTGAT 4891223 29 100.0 32 ............................. CTGCCGATGCAGCAGGTCGATTTCCTTGTAGT 4891162 29 100.0 32 ............................. TTCGAGGTCAGCGGCTTCGGCCCCGGCGAGCA 4891101 29 100.0 32 ............................. CCGGGAATGAACGTTCCCATGTCGGCTACGCC 4891040 29 100.0 32 ............................. ATGTGCTTCCAGCTTTCGTCGTCCAGCTTCCG 4890979 29 100.0 32 ............................. CAGCGGGCCACCTGGCTGCAGTTGCTGACCAG 4890918 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 24 29 99.9 32 GTGTTCCCCACATGCGTGGGGATGAACCG # Left flank : TGACCCGCATCATTCCCACCATCGAAGAGGTACTGGCCGCCGGCGGCGTGGAACCTCCCAGCGCACCGCCCGAGTCGGTGCCGCCAGCCATTCCCAACCCGGAGGGAATCGGCGACCTCGGGCACAGGACGCAAGGGTGAGCTTCCTGGCCGTAGTGGTGGAAAACGTCCCGCCGCGCTTGCGCGGACGTCTGGCAATCTGGCTGCTGGAAGTCCGCGCGGGCGTCTATATCGGCGATGTATCGCGGCGTACCCGGGAAATGATCTGGCAGCAGCTGAGCGAGGGCTACGAGGAGGGCAACGTGGTAATGGCCTGGGCCGCCGCCAACGAATCCGGCTACGAGTTCCAGACCCTGGGCGTTAACCGTCGACATCCAGTGTTGTTCGACGGGCTGCAATTGGTGGCATTCCAGCCTCTGGATCGGACCACGGAATAGAGGATGAGGCGGTAGATTTTTCGAGGTGTTTTTTCTTCTTTAAAAACAATTCTGTACGGTAAGT # Right flank : TGGAAGTACGCTCGCGCAGCGAGGATGCGATATATGCACGGGGCGAGCCGTTCACTTGAAAAGCCGACATTCCTGGCTGTCCTGTATTTCCCCTTTGGCATGGATAGAGCAGCCCCATAGGGCGAACGACGCCACCGGCGTCATTCGCCATGGCCGGGTCAACCGGAACGTCGAGCGGCTACCAGGCGCTGCTGCAGGCGCGTCAGGAAGGCCACTTCGAAGGCGGTCTTCTGCATCGGTGTGGGCAGGCTGTCGCGGCCGAAGGCGAAGGCGGTCCAGAGCTGGCCTTCGATCTGGTCGGCAAGCCAGTTCTCGGCCTGGCGGACGCCCTTGTCGATGGCGGGCTGGGCGGGAACCGGCCAGAGCAGGGAGAGACCGGGTTGCCGGTCGGCGGGGGGAATCTCGACCATCAGGTCCTTGTAGCGTTCGATGATTGCGTCGACGTGGGTCTTTTCCTTTTCATCCTTCGTCATGCTGGGTACTCCGTTTCTGAGAGTCAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACATGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACATGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 4902701-4901878 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058331.1 Pseudomonas aeruginosa strain ACR22 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4902700 29 100.0 32 ............................. CGGGAAGAGAGGAATCCATGCCAGACCTTGGC 4902639 29 100.0 32 ............................. TTCATGGACGACCCAGGCGAAGGCCAGTACAT 4902578 29 100.0 32 ............................. GGCAAAACTTGGGTTATCGACCCTGACTTCAA 4902517 29 100.0 32 ............................. TGGCACGAATCGTCGTAGCAGGCTTGGACGAA 4902456 29 100.0 32 ............................. GAGGAGTTGGAGGCCATGATCGGCGCCAAGTC 4902395 29 100.0 32 ............................. TCGATGCGAGACTCCAGCCCGGTACGAGACAT 4902334 29 100.0 32 ............................. GCGATCATCGAATGGCCGCACCGCATGGACCT 4902273 29 100.0 32 ............................. CTCAACGAGAAGAACATCCCGCGCAACATGAT 4902212 29 100.0 32 ............................. GCCATCAAGGAAGAGCCCCAGCTGCGCGTCGA 4902151 29 100.0 32 ............................. CCTGCATCAGATGCGGCCTCCTTCACGCGGGC 4902090 29 100.0 32 ............................. CTGCTCCAGGGCAGCAATTCCAACGGACTGGG G [4902076] 4902028 29 96.6 32 ..A.......................... ATGGAAGACCCAACCCGCGGCCAGGGGTGGGG 4901967 29 89.7 32 ..............C..........G.T. GTATCGACATCGATGGTGACCAGGCTGGTCCA 4901906 28 79.3 0 A..........A..C.....-..A....T | C [4901897] ========== ====== ====== ====== ============================= ================================ ================== 14 29 97.5 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GGCATCGTTGTACAGGGCGACGAATTCCGCGCCCCAGAACAGCACGATCTGCGCCTTGGCCGGCAGCAGCGTGGCCATCGTCGTCTTCAGGCTCGCCGACCAGGCGTCCGGCGGGCCGAGGGGCGAACTGGCCGCGTCGAGGCTGAGCAACAGTTTCCCGACCGTTCCTCCGTTGGCCAGGAAGGCCGGTGGATGGTCGAGGGGGTTCGGGTCCGGTTCGATGGTGAAAGGCTGTGCCATGTCTGCGGAGTCTTGCTCGGTTCCGGTTGAGGTGGTGGGTCGTATGGAATATAGGAGGGCGGTGGGTGCGCTTGCGTTCAATCAGCTTGGGGGACCGCGGGATCCCGATGCGGGTAGGTTTCGACTGGTCCCGAGGGAGCTGCCGGATTAGGCTGTGGGATGAGTACGGCCCTCATTTCCAGGAGCGGCGCGAGAGCCGCTTGGCCCGGTGGAATTTTGCTGTTGTTTTTCTTTTTTTAAAACAATGGGATACGGTAAGG # Right flank : GTCTACGCTCCTGCGGTTCGCCCCACCGCGCGGTATTTCCCACGGTGGGGCGAACCGCGCGGCACTACGACCAGTGGCGTGATCACCAGTGTCAGCCGCCAGTTGCGGAGACGCGGATCGCCCACCGTCCGGCAAGATCCTCTTTCAGGGCATGGAGTTTCCAACCAACCTGGTTCACGTCGCTGGGGATGCAGGCTTCGCTCAGCACGAATAACTGACGGCGCAGGCATTGGGCGGGGGCTGCCTGGATACCTTGCCCTTACCGGTCTCGAAGAAGGCTTCCAGCCCCCTGTGGCGGAAGGAAATAGATCGTGAACAGGCGGCAAGTGAAGGTTGTTAGAGAGTTAGCGGAATGTCCGACGTTCGCTGTTGCACCATGGAGTTCCTGCTAATTTGGACAGGGTGGTCGGTCCGGTCCATATCCCTCCTGCGCTCCTTCGCTTGCTAAACGGGGGTGAACAGGCGCATCCCTCGCTGGCTGCTCCTTGACGAGCGTCATG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //