Array 1 56109-56404 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBDK01000004.1 Bacillus pumilus strain 15.1 Contig_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 56109 32 93.8 34 ...........TG................... GAGCTTACGTATCCGCCGATCGCCTTATTGAGCT 56175 32 100.0 34 ................................ GACACCGAACAAGCATTCTGTTAAAGTGTTTTTG 56241 32 96.9 33 ...................T............ ATGTATCCAGAAATCATCGACTTTCTAATTTGT 56306 32 100.0 35 ................................ ATCATGGCGCTTATCAGTCGCTCATAGCATAGCCA 56373 32 71.9 0 ..........G.........T.A.C.ATTCT. | ========== ====== ====== ====== ================================ =================================== ================== 5 32 92.5 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : ATGAAAGAAATAGCCGATCAGTTAGGCGAAACAAGACAAAACATCTCAAACATTCACAAAAAAGCACTCAATAAACTAAAAGAAAAAACAGGGGGAGATGTCCGTGCACGAAGACAAAATGACCAATGGAGAAATGGAAGAACTCATTGAAACCTTCACACCCATGATCAAAAAGAAACTACAAAACACGGCATATCAAGAAAGAGAAGACCTCGAACAAGAACTCTATATCAAACTCATCGAAAAAATAGACCGGCTGATTTACCAAGAAGGACCTGGATTTTGGGAGTTTATTGTGGAATATATGACGAAGTTGTAAGAGAGGCTCTTGGTGCGAATGTGAGGTGAACATAAAATCCCCGGGACATTCGCACCTTTTTATTCGACAAAAATGAGAAAAAATGTATATTTTATAAAGGGGAAAACAAAATTCTTTATTGAAAGTTGTGGATTTTGCCTATCATTTTCTAAAAAATGTTACAATTAGGGCAGAAATCGCA # Right flank : TGATTTTAATAAGAGAAAAAAAGCATTTATGTTTGATCGAAAATTATTAGTTGAGTAACTACACTGATTAAAGTTTACTTTTCTTCAAAGATTGGGAGAAGAGTAGTCATTTTAGTTAATAAAGAAAAATGAAGACAATAAAATTAATTAGAATAGCTCTCCTCGGATATGTTAGAAGAACATTAAATCAAGATTAATGAATTAAAAACTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGGGCACCTGGGGCATTCGCACCTTTTCATTCGATAAAAATGAGAAAAAATGTATATTTTTTAGAGGTGAAAACAAAATTCCATATAGAAAATTGAGGGTTTTGGCTATCATTCCCTAAAAAATGTTAAAATTAGGGCAGAAATCGCAGTCGCACTCTATATGAGTGCGTGGATTGAAATCAATACACAACAAAAGTATTGCATAAATAGAAAAGGTCGCACTCTACATGAGTGCGTGGATTGAAATTTGGTAACTGT # Questionable array : NO Score: 8.60 # Score Detail : 1:0, 2:3, 3:3, 4:0.62, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 8073-7642 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBDK01000062.1 Bacillus pumilus strain 15.1 Contig_62, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 8072 32 96.9 36 ........T....................... CTCTGTTATTTCTTCAAACGAATAGGGATCTTGTTC 8004 32 100.0 36 ................................ CCTAAGCGTTTCAAATTCCTTTAACACATGTTCACT 7936 32 100.0 34 ................................ ATCTTGTTAAGTCTTCGAGTAAACGTGCTTTTCG 7870 32 100.0 34 ................................ TTCTTCGGCAATATGCTCTTTAATTTGATCACTT 7804 32 96.9 34 ...........T.................... ATGCTGTTTCCAAAGTCAATATTCATACGAGAAA 7738 32 96.9 33 .............A.................. ACCCATGCAAAGCTTTTAATCAATCCCAGGGAA 7673 32 84.4 0 .............A.......C.AT..T.... | ========== ====== ====== ====== ================================ ==================================== ================== 7 32 96.4 35 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : ACTGGTTTGGTACAGATGATTTCGGTAGAGATATCTTTTCAAGAGTTGTGCATGGAGCACGGATTTCCTTATGGGTCGGTTTCTTCTCGGTTCTCGGGTCTGTCATTTTAGGCACACTGCTTGGAATGATAGCTGGCTATGGCGGAAGAGTGCTAGATGCTGTGATCTCGAGATTGTTTGATATTTTACTTGCTTTTCCTAGCATTCTCTTAGCGATTGCTATTGTCTCCATCCTAGGCCCCTCCTTACAAAATGCCCTTATTGCCATTGCGATTATTAATGTCCCAACTTTTGGACGGCTCGTTCGTTCAAAAGTACTGAGTATTAAACAAGAAGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCGTTTCATTCGACAAAAATAAGAAAAAATGTATATTTTTTAGGGGTGAAAACAAAGTTCTATATAGAAACTTAAGGGTTTTGACGATCATTCCCTAAAAAATGTTATAATTAGGGCGGAAATCGCA # Right flank : GATTGTCTCTTAAACGGGTATGGCCACCTCAAATCCATCTTCTTACAATCTCCTCTTTCAAATAGCTATCAAATATACTGTTCATTTGTATAGTGAAAACATGACTCCTTGCAGTCATGTTTTTTTCTTCTTCTTTTTCCTGAATACACCTAAAAAAATCTCAAAACAAGTCGAAATGAAAAGTAGTTATTTAGATTCAAATTTTATCCATTCGTAGTGAATGATGAAGGAGGAATTGGTTTGGGTGAAACGGAGCGAACTGGTAAAGTTGAGCAGCTGATCTTAGAGAATTATCAAAGATTAAACAGCATGATATCAGAAGAAGTGGACTTTGCTTCTAACCATGGAGGGCTGACAGGGGATTCTAGAGAAGTGATGTGGATGGAGTTTTTTCGGAAAATCATTCCTAAAAAATATTCATTAGCACAAGGTGTCATCATTATTGACTCAGATGGAAATCATTCTAACGAAGTCGATATTGCCGTTTTTGATGAGCAGTA # Questionable array : NO Score: 8.93 # Score Detail : 1:0, 2:3, 3:3, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //