Array 1 727703-724264 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP062940.1 Bifidobacterium longum subsp. longum strain JCM 11343 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 727702 36 100.0 29 .................................... TGTACTTGCGCGTTGATTCCCGCAATGGC 727637 36 100.0 28 .................................... ATACCATACGTGTACAGCACGCGCGGTG 727573 36 100.0 28 .................................... ACGGTCATGGTGTCAAGCCCCGTGGCCT 727509 36 100.0 28 .................................... ACTATGGATATCGACATGAAAATCCTCC 727445 36 100.0 28 .................................... CTTCGAGGTTCCGGTAATGGCTGGGCTT 727381 36 100.0 28 .................................... AGCGTGAACGCAAGGCCATCGCATATGT 727317 36 100.0 28 .................................... CAGTGTTGCCGCTTTTTCGGGGGTGTCG 727253 36 100.0 28 .................................... GTAAAGGGTGGCGTTTTGTCGAAGTCAC 727189 36 100.0 28 .................................... GTCGTGTCGGTATCACCGTCACCGTCAC 727125 36 100.0 28 .................................... GGTCAAGTAGGGTCATGCGGGGTCAAGT 727061 36 100.0 28 .................................... GGTTGGTTCGATGATGCAACACCTATAC 726997 36 100.0 28 .................................... CTTCCTTTCCATTATTGAAAATCTCCAG 726933 36 100.0 28 .................................... ACATTTTGCCCACATTATCCAGATAAAA 726869 36 100.0 28 .................................... TTATCAATGAAGTTGCGGACGATGTTCG 726805 36 100.0 28 .................................... CGCGAACTTAACGGGGAGCCGGCGTTCC 726741 36 100.0 29 .................................... TCGTCGTCCATCTCTGTACCTCGGTTTCT 726676 36 100.0 28 .................................... CGTCTCGTGTTCTGGGCCCTCGTGTTCG 726612 36 100.0 28 .................................... TCCATGACCGCGTCCATCACCTCATGCC 726548 36 100.0 28 .................................... CGTTCCCCAGTGGGGTGAGTGTGATGCC 726484 36 100.0 28 .................................... CATCGAGACGACGCGCGAACTTGAGGCC 726420 36 100.0 29 .................................... ACCGATTGCAACGCGAATATCCCGGGTAT 726355 36 100.0 28 .................................... TCCTGCAACTCCTCCTTGCGGGCCTTCA 726291 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 726227 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 726163 36 100.0 29 .................................... ACGCGGCGAAGAATCTTGTTATCGCGGCT 726098 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 726033 36 100.0 28 .................................... GCCAACGGCGCGTACACCGGCAACTTCA 725969 36 100.0 28 .................................... AAGAAGACCGCGACTATCGGCTACCAGG 725905 36 100.0 29 .................................... GTGGGAATCCTGTTGAAGTGGGGTGAGGA 725840 36 100.0 28 .................................... AGGAGGTTCAACGCAAGTATTTCACGGC 725776 36 100.0 28 .................................... AGTCATTTGGTGTGCCTTTCACGATGAT 725712 36 100.0 28 .................................... TTGCATACGATGTCGAATATCCCCTCTC 725648 36 100.0 28 .................................... TGTCCTGCATTTCGTGCAAGACCGCTTC 725584 36 100.0 28 .................................... TGTACGCTGACGAGTTTCCTGTTGCTCA 725520 36 100.0 28 .................................... CGGCCCAACGGAGGTAGGTGCTGCGATG 725456 36 100.0 28 .................................... CCAGTTCGACGCGTAGGCGCGAGTGTCC 725392 36 100.0 29 .................................... CCCTTGCGCGTACTGTGCTTGTAGGTGGC 725327 36 100.0 28 .................................... CTGTGGCTTCTTCACCTTCGGCACCTTC 725263 36 100.0 28 .................................... TTTTCTCCAGCACACGGACGTAATCGGC 725199 36 100.0 29 .................................... CCAAGTGTGGGCCGAACTCAACAACTAAG 725134 36 100.0 29 .................................... CGCCTCGCCGCCGCACGAGAACGAGTCAA 725069 36 100.0 28 .................................... TATGGTGTAGCCAACAACAAAAACAAAC 725005 36 100.0 28 .................................... TATGGTGTAGCCAACAACAAAAACAAAC 724941 36 100.0 29 .................................... CCCTTGCGCGTACTGTGCTTGTAGGTGGC 724876 36 100.0 28 .................................... TATGGTGTAGCCAACAACAAAAACAAAC 724812 36 100.0 28 .................................... CGGGTAACAAGGTGGACATGCTCATTGA 724748 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 724683 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 724619 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 724555 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 724491 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 724427 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 724363 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 724299 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 54 36 99.7 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : GCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTACGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCAACTGAATATCTTTAAACTATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTATA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //