Array 1 239498-236415 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADVIS010000006.1 Citrobacter werkmanii strain CB00044 contig00006, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 239497 29 100.0 32 ............................. CGAAACCGCCGACTTTACAACCTACTACGGCC 239436 29 100.0 32 ............................. GCGATCACGTCCGTGATCTTTCTGTTTTCAAT 239375 29 100.0 32 ............................. CCATCGCAAAAAATCTCGACATCGACCTGATA 239314 29 100.0 32 ............................. CCGCAGTCACTATCAAGTAAGGATTTGTTATG 239253 29 100.0 32 ............................. CAGTTCTGCGATGCCGTGCGCGGTGTTCAGTT 239192 29 100.0 32 ............................. TCCTTGTCCTCGTCTGCCAGCACTTCCTCGCC 239131 29 100.0 32 ............................. CGGGTTGCGTAACGGTTGAGGCCGGTGCGGCT 239070 29 100.0 32 ............................. TGAGCGCGTCAGAGCTTCATCACCTGTAAAAT 239009 29 100.0 32 ............................. ACAGTTATTCAGGCCGTTACGTCAGCGTGGAA 238948 29 100.0 32 ............................. CCTCAACGGCGGCGATATCGTCCAGGGCATCC 238887 29 100.0 32 ............................. CGTTCTCACTTTGGCGGGGATTGGCGCATTAA 238826 29 96.6 32 .......T..................... ATCGATATTCAGCAAACGCTGATAGTCATCAA 238765 29 100.0 32 ............................. TAGCGTCGCAGCATTGACAGATTCAGCCGTAA 238704 29 100.0 32 ............................. ACTGCCGCCCGGCGTTTTTTGTTGCCGCCCTT 238643 29 100.0 32 ............................. CACTAATCAGGCTTGCGGCGCTGGAACTGCCA 238582 29 100.0 32 ............................. GGTAAAGTTAGGGATCGGCGTGTCGGTGTATT 238521 29 100.0 32 ............................. TTCCAGACCGTAGCCGACGATGAAGGGCTGGT 238460 29 100.0 32 ............................. CACAGCGCCTGCGCCACCTGCACCTATTGTGA 238399 29 100.0 32 ............................. ACATCCCAGTCAACGCCGTCCACCCGTTCATT 238338 29 100.0 32 ............................. CCTTCAGGCGATGGAGCGGACCTCATTTAAAA 238277 29 100.0 32 ............................. TACCAGTTGGATATCGTACAGAAAAAGGCATG 238216 29 100.0 32 ............................. ATTCGCTTTCGTGGCACACCTGGAGGCTCTTT 238155 29 100.0 32 ............................. TCGGCCCTCAGGATATTGAAGGCCGGACACAT 238094 29 100.0 32 ............................. CCCCAACAATTCAGCCGCGGCTATTCGTCCAT 238033 29 100.0 32 ............................. ACTACGACCCGAAAGAGGACAGCGAGCAGTAT 237972 29 100.0 32 ............................. TTGTTTTTTGCTTTCTCAGCGGCTGTAGCGTC 237911 29 100.0 32 ............................. CTTCATGCGTTTTAGCGGACGGTGTGGAAAAG 237850 29 100.0 32 ............................. ATCCGGCAGCATTGCGCCAGGCCGATCAGTAT 237789 29 100.0 32 ............................. TATCGGCGCCGCGGGTGATATTACCGATATGA 237728 29 100.0 32 ............................. ACATGTGCATCACTGCGCAGGTAAACAAAACG 237667 29 100.0 32 ............................. CACTTCGGCGGAAATTACTCCGGGGCTGGCGT 237606 29 100.0 32 ............................. ACGACTGGGTAACCGATGTTACGGTAATTTCA 237545 29 100.0 32 ............................. CTGGTTGACCAGCATCACGCCGAAAAATTGAA 237484 29 100.0 32 ............................. CTGAAAATGAGCGTGGCGCCGTAGGGGTTTGC 237423 29 100.0 32 ............................. GTTAGATTTACATCAGGTCTGGGGGCTTACTA 237362 29 100.0 32 ............................. CATTTTCGGAATCCCTGGGCGAATCTGCCATG 237301 29 100.0 32 ............................. ACGACGGCGTCATCCTCAACAGTGCAGGCGAT 237240 29 100.0 32 ............................. CATTTCAGTATCCAAAACAACGAATCGTACTG 237179 29 100.0 32 ............................. ACCGCCCGGCAGAACGGCGGCGGTGGTGTGGC 237118 29 100.0 32 ............................. CTACCGCTCCCAACATTCAGAACGGTAGAGAG 237057 29 100.0 32 ............................. AGGCTGGCGACGTCTGCGCATTCCTGCGCAAA 236996 29 100.0 32 ............................. GTGTCCGCCTGCCTTGATTCATGGATGGAAAA 236935 29 100.0 32 ............................. CGAACAGCAGGGAGTTCCCGTTTATAAGACAT 236874 29 100.0 32 ............................. CGGATTTCGCTCATTGAGCCCTGGCGGTCCAG 236813 29 100.0 32 ............................. CCAGGACATTGGGGATGATGGCACCCCGATAA 236752 29 100.0 32 ............................. CTGCTCGCCCGTTCTTTGGAGTTGATGTGGAT 236691 29 100.0 32 ............................. CAGGAAATCGGCGCATCCGTGAAGCTTGGTTC 236630 29 100.0 32 ............................. GATTACGCAGAACATTAAGCAGGGGCAGGCGG 236569 29 100.0 32 ............................. CGGTCCTACACCGACAATTCGTCGGCGCAGAC 236508 29 93.1 32 ............TT............... ATTGTTTCTGGCTGGAGCTGGAGCGGCCTGTT 236447 29 93.1 0 ........................C..G. | TG,GT [236422,236425] ========== ====== ====== ====== ============================= ================================ ================== 51 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTCGCTGCCGGAGAGATTGAACCTCCTCAGCCTGCGCCAGATATGTTGCCGCCAGCGATACCGGAACCGCAATCATTGGGTGATAGTGGTCATCGGGGGCATGGCTGATGAGTATGGTGGTTGTTGTTACAGAAAACGTACCACCGCGTCTGCGGGGGCGGCTTGCCATCTGGCTACTGGAGATTCGAGCTGGCGTATATGTTGGCGATACTTCGAAACGTATTCGGGAAATGATCTGGCAACAGGTTACGCAATTGGGTGGCGTTGGAAATGTAGTGATGGCCTGGGCGACAAATACGGAGTCAGGCTTTGAGTTTCAGACCTGGGGCGAAAATCGTCGTATTCCGGTAGATTTAGATGGGCTCCGATTGGTTTCCTTTCTTCCCGTTGAAAATCAATAAATTACGCGTTCTTTAATAATGTGAAATTGTTGTGTAAATGTTGGTGGATTGTTTGGTGTTAAAAAAATCCTTTTGGAACAAATATATAGTTTTAGA # Right flank : GCGTTTTATAACCCGGCCAACCGGGCAAATAACGTTGCACCAATAAGAATGCAATTTTCGTTGGCAATAAATGGATTTGAATGCAGGGGGTTATTTATTCCTTTACTGTGATCGCCGCTGCCGAGGAAGAAAAAAGCACCCGGTTTTTCTTCCAGGAAAAAAGAGAAATCTTCTGAACCTACCATTGGAGGGCGGTCGGTAAGGACATTTTCAGTCCCCAGGTATTCCTGGGCGGTTTCTATCAAATGTTGCGTTTCTGCCGGGTGATTATTGATAGCCGGATAACCCATTATGTCTAAATCAACGTTATACCCTCTCCGCCGTGACTCCTGGATCTCCTCCATAAAGTGACGGGTTAACGTCTGATGCACCGATTTGTCGAATGAGCGTATTGAACCCTGGAGCTCAGCGTTGCGGGCTAAAATATTCGGTGCTTCGCCAGCCTTAAGCATACAGGTAGAAATAAGCGCCGCTTTATTGGGATCGATGTGATCGGTAAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //