Array 1 43162-44187 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADMRB010000008.1 Ligilactobacillus salivarius strain 1001287B_170213_E2 NODE_8_length_88312_cov_60.7757, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     43162	    36	 100.0	    30	....................................	GGTTTAGCATAAGGTGTTGTATAGGTAACA	
     43228	    36	 100.0	    30	....................................	AGAAACTCTATGTTTGAAAAAACCAGAAGA	
     43294	    36	 100.0	    30	....................................	TTGTATACATGACCACCGTTAGCATAGCCG	
     43360	    36	 100.0	    30	....................................	CGCTTACGAATTTAAGCAGCCACTTATCAT	
     43426	    36	 100.0	    30	....................................	TTTTCTTTGCCTCAATCATTGAAACCCTAA	
     43492	    36	 100.0	    30	....................................	AAGATTGGATTGGGTATGACCTAGATCAAT	
     43558	    36	 100.0	    30	....................................	GAGCGTGTAGCAATGCAAAGCGACATTAAA	
     43624	    36	 100.0	    30	....................................	TGCCCCTTGTAAAAGAAAAAGTCATTGTAT	
     43690	    36	 100.0	    30	....................................	AAACGGCTTGCCGTTCTTCATACGTTTACT	
     43756	    36	 100.0	    30	....................................	TTGTATTATGATAAAGATTATTAATAGATA	
     43822	    36	 100.0	    30	....................................	TCTTTTTTATCTTTTGATCCAATTCAATTT	
     43888	    36	 100.0	    30	....................................	ACCTTGTACATCAGCTGTACCTTTAGCATA	
     43954	    36	 100.0	    30	....................................	CACAATGCTCAATGGTATTGCTAATGAATT	
     44020	    36	  97.2	    30	........................A...........	AAGTTCACACGAAAAGCCCTATGACAATAC	
     44086	    36	  88.9	    30	....................T.........G.T..T	AGTAATGCACCGCTAGTTAAGTGGTTTTTT	
     44152	    36	  83.3	     0	..........A.........T...AG....G..G..	|                             	
==========	======	======	======	====================================	==============================	==================
        16	    36	  98.1	    30	GTTTCAGAAGTATGTTAAATCAATTAGGTTAAGACC	                              	       

# Left flank :   AACAGACCGAATTAGTAAAAAGTATATGAATGTATTGATCAAAAAGATTATTGAAGACATCACGGATGATGAAAGACAAGCAATACTAAAATCAGTAAATGGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCCTTACAAGTAGATTATGATAATGATTTAACAAGACTATTCAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTACATGTGGAATTAAACAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTGAATCTTGTTAAGGCGACTAACGAATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAACTGTGATAATTACTATATTGATGAGGATTATATTGATTGGTACTAACGAATAGTTAAATTTTGATTATAAAGTAACT
# Right flank :  CTAAAATACAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTATGGTTGATAATGTAATATTATATAATATATAATATAGTTGAAGATAAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGCAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGGAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGTGACTATAAAGTTAGTTTGGATTCAATTTTCGAAAAAAATAGAGAGGGGGAATAATAATGAACT

# Questionable array : NO	 Score: 6.16
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTCAGAAGTATGTTAAATCAATTAGGTTAAGACC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-0.10,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-11] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [76.7-85.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0   Confidence: MEDIUM] 

# Array family : NA
//