Array 1 7158-6890 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEIB01000038.1 Veronia nyctiphanis strain CAIM 600 CAIM600T_38, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================== ================== 7157 27 100.0 33 ........................... TTTGAAGGTTTGGATAATTAGGGTCAGGACAAT 7097 27 100.0 33 ........................... TAGCTCACACTCTAGAAGCAAAAGAGATGGCAC 7037 27 100.0 33 ........................... TAATATTGACAATGAGATGTTATGCAGAGTCAT 6977 27 92.6 34 ......................T.T.. ACTCTTGAGGAATGTTAATTCAGCATTAGTATCA 6916 27 88.9 0 .A.........A.A............. | ========== ====== ====== ====== =========================== ================================== ================== 5 27 96.3 34 GTGAACCGCCGTATAGGCAGCTAGGAA # Left flank : TCACGCTGATGCGCTCAGAGGGATTGTTCGAAGTATCGACAGTTAAAACCGTTCCCGAAACAGCTCCTGAGGTCAGGTTTGTCAGAAACCAAACTATCGACAAAAGCTTTCTAGACTCAAAAAGACGTCGTTTAAGACGCGCTGAAAAACGAGCATTAGAGGCAGGCAGAGATTTCACACCCGCCTCCGAAGAAGAAAGAACGTTCCTGCCATTTCACAGCATCCCAATGGGCAGCAAATCATCGGGAAGAGACTTCGTTCTCCAGGTTCAGGTTGAAGGTGAGGAGAGTCCGCGCGATGGTGGCTATAACATGTATGGCCTCGCCACCAACGTCGATTGGCGAGGAACAGTGCCGCTAATCGAGTTATGACCCTTTTCTTTGAAGGCAAACTCCAGCCTATTAAAATCAGTAGGTTAGAGAGGTGTCTCAAAAAAGGGTTTTCTAACAAAAATTGCCCTCACGCCAGAGAGGACAAGATATCTTAGTCTATCTTTAACG # Right flank : TAAGGTCCGCCGTGAAATAAGCCGTCAAATTAACGGAACCGCCGAAAAGGCAGAGAAACAACAAAACCACCGAAAATGGTGGTTTTGTTGTTTTTTATGTTTTACAGCACTTCGAACATCTGGCCAATGCCATACCAAATTAGCTTTGAGTAAAAATTTGCCGAAGCTCGCGTGAAGCGGTTCATGCTGGAACGGTTCTGCCCCAAATCGCGTTAGATTATTTGCACACTTTAACCTTCTACACTAACGAGAAGTATTAGATAAATTCATCCAAACTGGCAACTAAAAATCGCCCCAAAATGGTTTAGCGTGATGCCATAAACTGTCTTTACCTCTTTATCAATTTTGTCCAACAAAATCCCGTTCGGAGACAGCACGAATTTGCCTAAATAAAACTATTTGCACTGGCTTTTAATTTTAAACTTGAGTGCGACAGTGTATCGGCTTTGAGAGCAGATACGTGTTGGCAGTGTTCCTAAGTGTTCAAGTTCACCACAAAA # Questionable array : NO Score: 2.87 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAACCGCCGTATAGGCAGCTAGGAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.00,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 1 34291-33424 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEIB01000043.1 Veronia nyctiphanis strain CAIM 600 CAIM600T_43, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 34290 28 100.0 32 ............................ TCACCTTGAGGATTTGGAGCAAGCCATGAAAC 34230 28 100.0 32 ............................ TTCCCGCGCGTCGCGTGTCTGAGGCTCGGACA 34170 28 100.0 32 ............................ AGAATAGCCGTATCAGAGTTCTTCTCCGCTAA 34110 28 100.0 32 ............................ TTCACCGCCAGAAGGTGATGTCCATTACCTGT 34050 28 100.0 32 ............................ GGGTTCAACCGTGGCAAAAGGCGAGCCGTTAA 33990 28 100.0 32 ............................ TCAGACAAGGCAACTTGCTGGCCTTCTGCAAT 33930 28 100.0 31 ............................ AAACCACATGACGGCCTCATTGATGCACGCT 33871 28 96.4 32 ..........T................. TATCGCGATGTATCCAATTTTCCTTGGGGAAT 33811 28 100.0 32 ............................ CATTGATAAGATGTTGCTGGGTGATGGCTTCA 33751 28 100.0 32 ............................ GATAATAGTACAAATGGCTGGTGCGGCAGCTA 33691 28 100.0 32 ............................ TTAAAAGTCTGCTGCTGTAATACGTTTGATGT 33631 28 96.4 32 .............G.............. CGGGATCCAGTAGTATTTTTTCATGACGTCGA 33571 28 96.4 32 ..........................G. AATAAAGTACTTCAGGCGTTTATCTGATGCAG 33511 28 85.7 32 AC........A..T.............. GCAGGGGAATGGTGTTGGCCGTCTTGTCGTCG 33451 28 92.9 0 .............T......T....... | ========== ====== ====== ====== ============================ ================================ ================== 15 28 97.9 32 GTGTTCCGCCCCACAGGCGGCTTAGAAG # Left flank : CTCGATTACAAAGGAAAGGCAGGTCTTGAGAGGCTATATAATTGGCTCGATGATCCGCTGAAAGAGTTGAAAGAAAAGGCAAGTCAGAACGCCAGTACTGAGTTCTACAAAGGCATATTCAATGCTCCTAAATACGGAGTATCCACGCGAGCACCTGTTCGGCATGTTAGATATGACGGTATATTTGAGCTGTACGTTAATACATCGAGAGAGCTCGAAGCAATGATTCAAGCTCGAATTGAGCAGAGTGGGCGGTGGTACCTGAGAGTAGGCAAATTGAGTGTTGGCCGTTTATCTAAATTACCTGAACGTATTCCGCCGCAGCATTGGCCATCCATAAATGATGATGTGCATACGCTCGGTTAGAAATACCCTTTTTTTAGTGGTAATCATAAGCTATTGATATTTAATACTTGTATAACGTTGAATTAAAAAAGGGTTATAAGACTATATGTTGATTAAGTAACTGACTTAACGACTAAATTAGCTTTTTTATAACG # Right flank : GTCAGCTGACTATCGAATAAAAATATCGAGTGGTATGTTGCTTTTCAAGTCACTTATTAAAATTTAGAGCTTATTGAACATGTTCGACACATTTGCGACATAAGTTAATTAACCAACTGTTTTTAGTATTAATTTAAAGTCCGGCCCGGGGCACCATCAAATTAAGGCCTTACAAGTTTCGCTTGTAAGGCCTTTTTCTTATTTCTAGTCGACTTTTTCTAACGTTGCACTAGTTCTTGCTGCGTTTAACTTGCTTTTCTGTTTTCAATTGAAACGCTTTGATTTTTGGCGCGATAAATTCTCTGTAACGGCGACCGTTGAAGATACCGTAGTGGCCTACGCCTTGTTGTTCATAGTGTTCTTTTCGCGAGGCTTTTACGTTCTTGCAAAGCTTGAGAGCAGCAGAGGTCTGGCCTTTTCCGGTGATATCATCGAGTTCACCTTCGACCGTTAATATGGCGGTTTTCTTTATATCAGCAAGATCAATCAATGTGTCTCGA # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCGCCCCACAGGCGGCTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.70,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //