Array 1 1517960-1518927 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB905472.1 Phocaeicola massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 strain DSM 17679 aczJl-supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1517960 32 100.0 34 ................................ AAAGAGGAAGACTTGTTGCCCGGCAAGGATGGAA 1518026 32 100.0 33 ................................ ACCATTAATATAGTGGTACTATTCATTCAGTTA 1518091 32 100.0 32 ................................ TATAACTTAACCCAACCACGACAGCCGGTGAT 1518155 32 100.0 9 ................................ NNNNNNNNN Deletion [1518196] 1518196 32 96.9 32 N............................... TATAACTTAACCCAACCACGACAGCCGGTGAT 1518260 32 100.0 33 ................................ AAAGGAGAAAACCTTTCATGAGCCGGGACCGTT 1518325 32 100.0 34 ................................ CTTGACTATCTACGGAAGCAAAAAAATATCCCTT 1518391 32 100.0 36 ................................ TTGTCCAGCTCACAGAACTTGGCAGAGTAACGCTCA 1518459 32 100.0 36 ................................ AATATTACAACGAGTGACGACGGCACCAGTACGATA 1518527 32 100.0 33 ................................ AGGGAGGATTTGTGCATGGACTTGAGTGAGATA 1518592 32 100.0 34 ................................ GATGATATACTCGAAGCCAACAGGGATGTACTAG 1518658 32 100.0 34 ................................ TGGCCATATCCAACAACCTGCCGATTTTTACGGA 1518724 32 100.0 7 ................................ NNNNNNN Deletion [1518763] 1518763 32 90.6 34 NNN............................. TGGCCATATCCAACAACCTGCCGATTTTTACGGA 1518829 32 100.0 35 ................................ AATTTAAGGAATTGGTTGCCGACCTCATTGATATG 1518896 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 16 32 99.2 30 GTCACACCTCATGTAGGTGTGTGGATTGAAAC # Left flank : TGATAATTATCCGGTATTTCTAATAAAATGATTTACGAGTATGTATATTCTTGTAACTTATGATGTGGATACTACGAGCAAGGAAGGAGCTCGCCGTTTACGGTGTGTGGCTAAGGCTTGCATAGATTATGGACAGAGGGTACAGAATTCTGTCTTTGAATGTGAGGTGACAGAAGCACAATATTGTCTTTTGAGAGGAAGAATCAAAGATATCATTGATATGTCTCGTGATAGTGTTAGATTCTATATTCTTAGTAAAAATGAGAATAGAAGGGTGGAAGTGATAGGTGTCGAAACTGCTTATAAAGTTAATAATGCTTTTATTGTATAATGTGTGCGAATGTGGAGTGTTGCAAAAAAAGTAGTATCTTCGCAACTCTTAATAATCAGCAGATTGACTTGTTTATAAGGCGAATGCCGTTATTCAATTGAAATAAAAATGAGAATTCGCATATTAGTAGGGTTAATTTATTGATTTATAATATACAACTCTGTATACA # Right flank : CTAATGTGCAAGCTACGCCAGTAGGACCATTGAACTTACGCTACAGACGCTACTTTCAATCTTCCTCTTTTAAAAAAGAAACAAACTCGGGTGAGTTTCGTTCCTTCGGCAGCAAGGTCATCGTATGTATAGGAAAAGGGTTCACCGGTGGCTTTATCATACCAGCGACGACGCCGGACATAAAGATAGACAGGTTTGCCACGCAGAGGAAAGTCCTGAATTACTTTTTCATCTATAAAACCACTGGAAATGACAGTACCGCTCTTGTAATCAAAACGTTCCATATAATTCTTCTCATCAAGCCAAACTTCGATTTTTGAAGAATCGTCATGCCAACCGGATATGTCGAAATATTCCATTAAAACTTCAGAGAAGATTATCCGAAGTAACTTATGCAGACTACGATTGGGATTCATTGGATTGGTTTGTTTAATTTAAATGCAAAAATAATGTTGTTTGGATAATCTACACGGATCACCCACAGGATTTTCGGATTAATC # Questionable array : NO Score: 5.93 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:-0.28, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCTCATGTAGGTGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.90,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA //