Array 1 31193-28280 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSTR010000001.1 Acinetobacter baumannii strain A15 P_contig000001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 31192 30 93.3 30 ............................AG TCGGCACAGGTAGCAGTTGAGCAGTCATCG 31132 30 93.3 30 ............................GA GTTCTTTCATAACGTAGGCTTTAATGCCTG 31072 30 93.3 30 ............................AA CGTTTCCGCAAATCTGCGAAATACTCGTTG 31012 30 93.3 30 ............................AA TATAGTGGCATCTTCGAGAGTTAAAGGCGG 30952 30 96.7 30 ............................A. CAGAATTTTGTTTACAAGTTCTAAGCGGGA 30892 30 93.3 30 ............................AG TTTGAACATCTAATAATTGAGCTGTAATAC 30832 30 93.3 30 ............................GC CTCCAATTGATCCAATTGATCAACCTCCAT 30772 30 96.7 30 ............................A. ATGGTGGTTGTTATAAACCGCCTAATGATA 30712 30 96.7 30 ............................A. TAGAAGACGTGGACTCCCCCAACCTTTCAA 30652 30 100.0 30 .............................. TGCGCTCTTGCGGTTATTATCAAAGACCTC 30592 30 93.3 30 ............................AG CATGTGCTAAATCAGGGAAAAGAAAAGCCA 30532 30 96.7 30 .............................A ATTATAATCGCAATAGCTTCAATACTCCTA 30472 30 93.3 30 ............................AG TGCGTGAACATTATTCTTTCTGCATCAGCT 30412 30 93.3 30 ............................CG GTACGTTCAACGGTCAGCAGATTTGTGTTA 30352 30 96.7 30 ............................A. TAATAGTAATCGTAGTGGCGGTGTGTCAAT 30292 30 100.0 30 .............................. AACTTGCTTACGGCCAACACCTGTAATCAA 30232 30 93.3 30 ............................AG CCAACTTAATAGTAGAAAGGTAATGCCCTT 30172 30 96.7 30 .............................A CCAAACCAATCAGCAATGGAAAAACCACCG 30112 30 96.7 30 .............................A TAAAACGCGCAAAAAAATATAAGGGACGTA 30052 30 100.0 30 .............................. AAACTGATTTACAAGCTTGATCAGTAGGCC 29992 30 96.7 30 ............................A. CATGAAGCTTATTAAATGACTGACATGGCT 29932 30 93.3 30 ............................AA AGATTCTAGCCCCCTCAATTGAGAAGTTAT 29872 30 96.7 30 .............................A TTTAGAAAGCTTGGAAAATAAAGGTGACTG 29812 30 100.0 31 .............................. TGCCGATGCGTGCAAACATTTGCTCCGCTTC 29751 30 100.0 30 .............................. ATAGATGGCTTTAACTGACTCCCAGCCCAT 29691 30 96.7 30 .............................A TAAGAAAAATGCAAAAAAGGCATTTATTAG 29631 30 96.7 30 ............................A. ACACATGTTTTTCTAATAAGAATAAGACAA 29571 30 100.0 31 .............................. ACCAGATAGCAACTCTCTAGGTCAGATAGAC 29510 30 93.3 30 ............................CC AGACTTGATTTTTATCACCATTGAAGAGTT 29450 30 96.7 30 .............................C AGGTAATAAAAAACCGCCCGAAGGCGGTAT 29390 30 96.7 30 .............................C AAAACGTATGGGTTATTGATGCTCAAGATT 29330 30 96.7 30 .............................C GTTGCTACGCGCCACGGCGCACCCATCGTT 29270 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 29210 30 96.7 30 .............................A AAATCACATCAGGGAAGTGAAGGCGAGCTA 29150 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 29090 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 29030 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 28970 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 28910 30 93.3 30 ............................GA CCCATAAATCAAACAAGCCAACATAATTGA 28850 30 100.0 30 .............................. CCTCAACTGACATTTCCAAATAGTAGAGGC 28790 30 96.7 30 ............................A. AAAGCGCACAACCCATTGATTTGTATTTTT 28730 30 93.3 30 ............................AG CAAATAGATCAACTGGTGCGCCCTGTGAAT 28670 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 28610 30 96.7 31 ............................G. AAAAAAGAGCATTTCCAGCAAAAATTGACGA 28549 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 28489 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 28429 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 28369 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 28309 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 49 30 95.1 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.23, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //