Array 1 23866-22919 **** Predicted by CRISPRDetect 2.4 *** >NZ_WSLF01000019.1 Defluviitalea raffinosedens strain 249c-K6 seq19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 23865 30 100.0 36 .............................. GTGTATAAAGCAACAAAAGAAAAGACTATGAAAATA 23799 30 100.0 37 .............................. TTATATAATCATTTTTAGATATAACTTTGTCTTTCTG 23732 30 100.0 35 .............................. AGGGGAGAAATAAATATATCTTTGTTACCCAGGAC 23667 30 100.0 36 .............................. TCTTCAGAAATAATTAATAAATTTTCATACAATCCA 23601 30 100.0 36 .............................. ATATACACAGTACCTCTGGATAAGTAAATGTTTCTT 23535 30 100.0 36 .............................. GTTTTTCTTTTTCTCTCAATTCATCTATATAACTCA 23469 30 100.0 35 .............................. TAAGCATTTCATACCAAAAGTCGAACTGTGCCTTA 23404 30 100.0 36 .............................. TAATTGTTTCGTCGGTGCCAGGGTAGCCAATCACGT 23338 30 100.0 35 .............................. GTAAATCTTGGTACTCAACTTCTTTTCCCAGTTCC 23273 30 100.0 36 .............................. ATTTTTGACTTTGATAGATTGTATCCTTATGATTTA 23207 30 100.0 34 .............................. CTATATATTTTGGTGGTTTTATTAAATACAAATA 23143 30 100.0 36 .............................. TTCTGGCACGTCTTCAAATTCTCCCCACTCTAAGCG 23077 30 100.0 35 .............................. GTTCGGGAATCTTGTATCTAAAATTTCTTTCTGTT 23012 30 100.0 34 .............................. TCACAACAAGCATCTGAGTTAGCAGAGGAATTAG 22948 30 86.7 0 .........................C.GTT | ========== ====== ====== ====== ============================== ===================================== ================== 15 30 99.1 36 GTTTTAATCGGACTATTGTAGAATTGAAAC # Left flank : AAATAGGTATTGCAAAATGTAATTATCCATGATATAATGTTTTTCGCTTGGTAAATTTGATGACAAGCATATGCGCTATTAGCTCAGTTGGTAGAGCACCTGACTCTTAATCAGGGTGTCCGGGGTTCGAGCCCCCGATGGCGTATTATGCGATTGTGGCGGAATTGGCATACGCGCTAGACTAAGGATCTAGTGGTCCTAGACCTTGAGGGTTCGAGTCCCTCCAATCGCACTAAATAAAAAAGATATCTCCTGATCAGGAGATATCTTTTTTGCTATATAGCAAATTCTCTAGGATTTCCTATATAATAAAAAGATGTTCTCTTGATCTTGACAATGTACTTTGAATCAAAAGTGATCTTAAGATTCATGTCGTCGACCCTCGGTGATGCAAAATACCCAGGGGGTCGACGACTTTTTATTGCATTTAAAAGGGTTAATTGGTAAAATAAATACAAATAAATCAGGATTAAGAGATAAAAAACGTTGATTTTACTGCT # Right flank : TTGAAATCTTATGTTCCAATAAATATGTTTCAATAAATCCCTGACTTTTTTGGAGTCAGGGATTTATCTTTTGCATCGAAAAAAATTGTACAAAATACTAAAAATTACACCACTTTTTATTATCAGAAATGTATGATAAAATAAATGCGTGATAATATAAATAATAAAATATCACAAATTTTAAAGGAACAGCTGATTTTTTTTGTACAACAACGATGGGGGGAAGATGATACCATGAACTATTTGAGGAATTGTAAGGTTTCTACAAAGCTTTTTTTAATGGTACTGCCGACAGTGGTGATTGCGGTATTTTATCTTTATCAAATCGCTTGTCAATCCCAGAAGATCAGTGCCATTACAAAGAAAACATATTATGATGAGGTCTATGTGAATACGAGACTCATTTTAAATGCGGAAAGAGCTTTTTACGAAGCCACAATTGCAGAAAAAACTTTAGCACTATCCGGTGATGAGTTGGATGCAGATGCACGCTCCTCATT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGGACTATTGTAGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 36813-33672 **** Predicted by CRISPRDetect 2.4 *** >NZ_WSLF01000008.1 Defluviitalea raffinosedens strain 249c-K6 seq8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 36812 29 100.0 37 ............................. TGAAAATCTTTCAGCGGTTCAAAGCGGAACAGATATC 36746 29 100.0 38 ............................. TTTGTCAGCGATAAAAAAATCAGATATAAAAATTATGG 36679 29 100.0 36 ............................. TTCGTAAATTTCCCTCCTATTCTGTCAATTTATTTT 36614 29 100.0 37 ............................. TAATTCATCAAAAGTTTCTATATAACTCTTTATCTCA 36548 29 100.0 37 ............................. TGACCAAACCCAATTTTATTAAAGAAAATAGCTGAAG 36482 29 100.0 36 ............................. TTATATCCCCCTCCTTTAACAGTATTATACTGTAAA 36417 29 100.0 38 ............................. TATTTTGAATCCTAGTGCTATTCCTACATCTTTTGCAG 36350 29 100.0 38 ............................. TAAGAAGGCCATCTATGTTAGACGCAGAGGAGATTTGG 36283 29 100.0 36 ............................. TCGTTGTTAAGTGTGTGCTGCAGGTCTACGTTACGG 36218 29 100.0 37 ............................. TTGAATTTTTTCGTATTTTCTATAAGCTCTCTACCAA 36152 29 100.0 37 ............................. TCTTTTCAGGCTTTTTGATAGGCTTAATCTCAACAAA 36086 29 100.0 38 ............................. TGATCTACTTTGTCAATATCTTTTGTGTCTTGTAGAAC 36019 29 100.0 37 ............................. TGAACAAACATGGAAGATGAATCTATCCTTTAGTATC 35953 29 100.0 37 ............................. TTATTCTGTAGGTAATAAGTTTGTACAATGCATTCCT 35887 29 100.0 39 ............................. TTGTACACGTATCCCAGGCGAACCCCTATACTCTTCAGG 35819 29 100.0 38 ............................. TTGGCCTTGCTTAAGCAATGCCTCGGCATCAGTAGTCA 35752 29 100.0 36 ............................. TAGAAATCGGCTTTTGTTATATCGATATAATTTAAA 35687 29 100.0 36 ............................. TAGAAATCGGCTTTTGTTATATCGATATAATTTAAA 35622 29 100.0 38 ............................. TAGAGAACCTATAGACTTGATTATTGCTAAAGGGAACA 35555 29 100.0 37 ............................. TTTAAAGCTTCAATCTTTGCTTTTAAGGTTGCAATTT 35489 29 100.0 37 ............................. TCAGCAAGGGCATTCAAGCCCTTGCAATTCATTTGGC 35423 29 100.0 38 ............................. TAAGAGGTGGATATCGACGCCAGGATGAGCCATGCTGC 35356 29 100.0 37 ............................. TATTGTATTCCAGTGATGTATCTCTGCATCTTTTCCA 35290 29 100.0 37 ............................. TAGTATGGCGAAAAGCCATGCACAGCACAAGAGCTGG 35224 29 100.0 37 ............................. TGAAGGGGATTGGACAGAAGAATATTTGACCTGGTTT 35158 29 100.0 38 ............................. TTATTCCTTACATTTTTCATGTGGAAGTATGTCTAACT 35091 29 100.0 37 ............................. TTTAGAAGGTACATATATAGAGAATATTGAAAAATGG 35025 29 100.0 37 ............................. TCAAGTATAAAACTGTGGGCATTTTGTGGGGTGTTTG 34959 29 100.0 38 ............................. CTTTAAAGTCCTTTAAATCGTTTTTAAGGGTATCTATC 34892 29 100.0 38 ............................. CTTTTATCCCTCCTAAAATAGTTTTAATTGACCTTCTG 34825 29 100.0 37 ............................. CTGAAGCAGATGAACAAGAGGTAACGGAACTTGCTGA 34759 29 100.0 36 ............................. CCTAATTTCTTAATAATTTGTTTTTTATCCATTTCC 34694 29 100.0 37 ............................. CGAATTTATTTGAGATATGGCTCGCTGTAGATTTCCT 34628 29 100.0 37 ............................. CATCGTTAAGGAATTCGATTGCTCTTTCATATTGAGT 34562 29 100.0 38 ............................. CGAAGACCTTGAGACAAAATGGTTTCAAAAAGTATATG 34495 29 100.0 35 ............................. CTTGGACAACCATATAGAAAAGCATATGTAAACAG 34431 29 100.0 36 ............................. CCGAAAGGTGGTAAGAAGAATGAAAGTAAGCGAGAT 34366 29 100.0 37 ............................. CTGTTCTTTTCCTTTCATGTATTTTTTTTATCTAATG 34300 29 100.0 38 ............................. CTCCTGAACATGTTAAAACATATGCTTGGAAGAAGAAA 34233 29 100.0 39 ............................. CTAAACTTACAGGGCAAAAAGGCGCTATTTTTACCGCAA 34165 29 100.0 37 ............................. CTTCTGTTGTGAAAGCCAAGATGCTAAGATATCCTCC 34099 29 100.0 37 ............................. CGGAAATAATCTTTGTAGTCCTTCCAAATTGCTGAAA 34033 29 100.0 38 ............................. CTAGACAACGGGTGGACCAGGATTAAATCGAAGCCCGT 33966 29 100.0 38 ............................. CATTTTTCAGTTGTGAAATAGATCTATAAATTTCAATA 33899 29 100.0 37 ............................. CGGGGGCATAAGGTTCACTTTCTCCCGTCGCATGATT 33833 29 100.0 37 ............................. CATTGGTCATGTTGTAACAGTAAATACAGCAGATGAA 33767 29 100.0 38 ............................. CTTCATCAGCTGAGTGAAATTTTTTTCCAACATAATTC 33700 29 93.1 0 ..........................GG. | ========== ====== ====== ====== ============================= ======================================= ================== 48 29 99.9 37 GTTTTAATCGGACTACTGTAGAATTGAAA # Left flank : AGACGGTGAGTTATAAAACACTTATTCAGATTGAATGCTATAAGTTAATTAAACATTTAACCGATATTGAGGAATATGAAGCATTTCAAGCGTGGTGGTAAATATGTATGTATTGATTGTTTATGATGTGGAAGAAAAACGTGTAGCCAAAGTGCTTAAATTTTTACGGAAATACCTGAATTGGATTCAAAACTCAGTCTTCGAAGGGGAAGTAACAGAAGCGCAGTTAACGGAAATAAAAATGGGATTAAAAAAGATAACAAATAAAGAGCAAGACTCCATAATTATCTTTAAAGCAAGAAACCAGAAATGGCTGAATAAAGAGATCATGGGGAAAGAGAAAAATCCTATAACAAACTTCTTAGATTAAAAGTCGTCTACCCCCGGTGATGCAAAAATGCCAGGGGGTCGACGACTTTTTATTGCATTTGAGAGGGATAATTGGTAAAATAAATATAAAAATTTTTTAATCAATAGAGTAAAATGTTGATTTTACTGCT # Right flank : TATTAAATAATTGGACAAAAATAAGTGGAGCAAACCTCCACTTATTTTATGCAAAATATGTTGTAAAGAATGAAATATTAATATTTTTGAATCATAGCCTTTATATTCATCTCCAAAATTACTTCCCGCCATATGTTGAGTCTCCTGGCCCGAATTCGAACACAAAGGTCATATTCCATATTGGTGTAATGTATACGACCAACTGGGCGGAAGGGGCCAATCTTTGGGAACCGATCGAATAACTGACGTCAAATGGAATCTGAGCTTTTAGAAGAGCTGCTTCTGCTGCCAGAAGGAGCTCTTCGCTAATGGCTTTAGCAGTTATTAATTTTTGAAATGCTGTGGTGGCAAGTAAAGTAAAGAGTTTTTCAAAATTAGACACGTTTTTTATATTGCTCAACTGGGCAAGTTTGCTGAAATCAATATTTTGATTGTTATTATACGAGTTTTGAAGGCTCATAACATCACTCCAAAAGTTTTATACTATACACTGTTTTCTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGGACTACTGTAGAATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 2 45112-44552 **** Predicted by CRISPRDetect 2.4 *** >NZ_WSLF01000008.1 Defluviitalea raffinosedens strain 249c-K6 seq8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 45111 30 100.0 36 .............................. GAATCTGCTCGTTCCGGGGAATTAAGAAGGAATATT 45045 30 100.0 36 .............................. TTTTGATCCAATATAATTACTGTTTTCATCTACAAA 44979 30 100.0 37 .............................. AAGAAAGCGACAACCATTCCGAGTTTATTAACCCATC 44912 30 100.0 35 .............................. GTACTTGCTATAATTGCTGATATAGCTCCTACATA 44847 30 100.0 37 .............................. GCATTCCCTCTGCTGTATTCTTCATTTTCCTTTTTTG 44780 30 100.0 37 .............................. TTTATTCAAAATAGCCGGCTAGAATTTTCGTAATTTG 44713 30 100.0 36 .............................. CGATGTCCAGTTAATAAAAATTCGTTTCTTTTGATT 44647 30 96.7 36 ............................G. AACAGATCAAATGAATGAAAACATGAAAAATGCTTA 44581 30 76.7 0 ....C...AA..T.......AT.......G | ========== ====== ====== ====== ============================== ===================================== ================== 9 30 97.0 36 GTTTTAATCGGACTATTGTAGAATTGAAAC # Left flank : TTATCCCCTGTCGTTGCAACGACAAAAGAGGAAATTAACGGGGTCATAAAACCGAGAGATTGTCAATTGGAAGAACGAAAGTATGCGGAAAATATCATCCGTAATTTAAAAACGAAATATGAATTAATATATGACAAGCCTTCATCGGGCGTTGACTTGAGGATTTCATTTAAGCAGGAGGACATAGAAAAATATAAGAAGGGCAAACTGATTTATTATAAGAATACCTTTGTAAAAGGATTCTTATGTCCCTTTGAGGCCAGTGGAAGCCCGGAACTTATGGAGATCATGTGGGAAGTAGGAGCCGGTGAAAAAAATAGTGGCGGATTTGGAATGGTTGAAGTTATGAATTGAATAGTATCAAGCAAAAAAGTCGTCTCCCCCCGGTGATGCAAAAATGCCAAGGGGTCGACGACTTTTTATTGCATTTGAGAGGGATAATTGGTAAAATTAATACAAAAAATTTTTAAAGAGCAGAATAAAACGTTGATTTTACTGCT # Right flank : GTCTACATTTCAGTTCTTTGTAGAAACTGTAATGTAGACTTTTTGATTTAAATACACTACTTAAATTGGTTTGTGTATTCGAATTCTTTACTAATCTATCAGTAGTTTTAAAATTTACAAAATTATTAATATAATGAAGGAATTTTGATTTTTCTGTAGAAGTATATAGATATATGACTTTAGTAAGTAGGAGGTGAAATGATGGCGTTGTTAACGTTTACAGGTCATCCGTTTATAGATTTAGGAAGCGCAGTTCTTAGCATGATTTGTAATAAGGAATGTTATGCTGAAGTAACCAAAGAAGATATTTTGAATAATCTTGACGAATTTTTAGAAGTGATCAAACATCGCTTTAATGACTTGAATGCGAGCGAAAAAGAGCTGGAGTATAGTAAGCGAGGGTTAAAACAACATTTTGCTTTAATGTACAACATTAATCACTATTTATTTGGAATAAATAACAAAATTGAAAATCCTATTTCCGGAAAAAAAGAGACGGT # Questionable array : NO Score: 9.11 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGGACTATTGTAGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 3 55347-55055 **** Predicted by CRISPRDetect 2.4 *** >NZ_WSLF01000008.1 Defluviitalea raffinosedens strain 249c-K6 seq8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 55346 30 100.0 37 .............................. CAAAAACACTCAAAAAAATTGCTTTTGCTTTAATAGG 55279 30 100.0 36 .............................. TATAAAGCAGAATTCTATGAGGTAGTTGATAAATAA 55213 30 100.0 35 .............................. CTCCATCCTCCGAATTTTTCTTGGAGCCCTTTTAT 55148 30 96.7 34 .........A.................... TGCAGTTAATACAAAGTCTTCCATGCCAGTTCTA 55084 30 90.0 0 .......C....T.........G....... | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 97.3 36 GTTTTAATCGGACTATTGTAGAATTGAAAC # Left flank : GAACAGTATTGGTACCCTTAAGAGCCATCTTTGAAGCGCTGAATATCGATTTAAAATATGATGCTTCAACCAAGACCATTTACGGAGAAAAAGAAGGTACAAAAATCATACTTCCCCTGGGGAAAGATGCTACAGTGAATGGACAAGTAGTAAAACTCGCCACTCCAGCCCAAACAATCAACGGCAATACAATGGTTCCTGTAAAATTCATCGCCCAAAGCACAGGCGCAGATGTGAAATGGGATGGGGCAAGCAGAACGGTTATTATTACAACTCATTAAAAATAATATTGAAATCAATTATAATTAAATCTTATTTCCTTTTATTTCAAAAATAGAATAGAATTTATAATATTATTTTTAGATTAAGAAGTCGTCGCTCCCCGGTGATGCAAAATTCCCCGGGGGTCGACGACTTCTTATTGCATTTGAGAGAGATAATTGGTAAAATTAATACAAAAAATCAGGATTAATAAGATCAAAAACGTTGAATTTACTGCT # Right flank : TTTATGATATGTCCAAGTTTTTATCTACATAGAGTTAGTTTTACTATTCGTGATATCTACTGATCAGAGATCTTATTCCATGTTTTTAACATAATGAAAAATCTTATAGAGTCTTGGGTTAGATGATTTTGTAGGATTTAATGTGTTTTAAAAATGTTATATTTTGGATTTGAGTTGTAATAGTAAATTTATTAAATCATTTTATTAAGTATGGAGCTTATATTGGGTAACATTAGGATTTAAGGTAATAGTTGCTAATCAAGATGTTTTTTGTTAATTTTGATTGCAATAAATATTCGTTTATGAATATTACTATTGAACTGTTAATTAATGAAGATGCTTGGGTAAATCTAGACAGATAATAGGTTATCTGTCATTTTTATTTTGATTTCTGTAAAATTATATTGTAAAAAGTAAGAAATTAGGATAAAATGATAATAAAATATTATAATTATTATAAATACTAATAAAATTATTTTTATTAATTGATCGGAGGAGTT # Questionable array : NO Score: 8.92 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGGACTATTGTAGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //