Array 1 81706-82761 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CZQA01000011.1 Candidatus Nitrospira nitrosa isolate COMA1, whole genome shotgun sequence		Array_Orientation: Unconfirmed

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	====================================	======================================	==================
     81706	    36	 100.0	    38	....................................	GTCAGCGCCTGCGCGAGATCGGTTTCCAGCGCCTGGCC	
     81780	    36	 100.0	    37	....................................	GCCACCTGCTGCGCCGACTTCGACGCCCCCATCGCCA 	
     81853	    36	 100.0	    36	....................................	TACTCAGCCGAGGAACGTCAGAAACTCTACGCCAAA  	
     81925	    36	 100.0	    38	....................................	ACGGTATCGGTGGCGCGCGCCCGCTTATAGCTCGGCGT	
     81999	    36	 100.0	    37	....................................	GGTAATGTTCAGGCAGATTAATGTAGCTCATATGGTT 	
     82072	    36	 100.0	    36	....................................	AAATAGATTCTGGCACGGTCTACACCAGTTCGCCAG  	
     82144	    36	 100.0	    38	....................................	GAGTGGCACAGGCGCTTCATCGGGCACCATTTCCAATC	
     82218	    36	 100.0	    37	....................................	GCATTTTCGCTGGAACGAGTGTGAGCCGCCTTTGCAC 	
     82291	    36	 100.0	    36	....................................	TCCTTCATAAATGCCCATTATTTACCATCTTTTCTT  	
     82363	    36	 100.0	    36	....................................	CAGGTGGAGGATGTCGCGAGGTTTTTCGGCGTGCCT  	
     82435	    36	 100.0	    36	....................................	AACGCCGTCGCCGCCACACCGACACGATCCATCGCA  	
     82507	    36	 100.0	    38	....................................	GTATGACGTGGAGAATACCACCTGCGTGGAGACGGTGG	
     82581	    36	 100.0	    36	....................................	CATACCTTCGAGAATGATTTGCTCTCTAGTTGGGTC  	
     82653	    36	 100.0	    37	....................................	CACAACTAGTGGATTCAACTAGTGTTTTAGTCACGCG 	
     82726	    36	 100.0	     0	....................................	|                                     	
==========	======	======	======	====================================	======================================	==================
        15	    36	 100.0	    37	ATTTCCGCAGCTGAGATGCTGCGGCCCCATTGAAGC	                                      	       

# Left flank :   ATGCGAAGATTGTATTTTGTCACGTATGATATCCGCGATTCTAAGCGATGGCGCCGCGTATATAAGACGATGAAAGGGTTTGGCGAGCATCTCCAGCTCTCGGTATTTCAGTGCGAATTGCCGGAAGTGGACTACATCAAGATGAAGGCAGCATTGGGCGAAATGATCAATCATCACGAGGATCATGTTCTGGTTGTAGATCTCGGTCCCACGGAGGGGCGTCCCATCAAGAGCATCGAATCGTTGGGCGAGGCCTTTGTGCAAGTGCAGCGCCACGCGCACGTAGTGTGATGGCCTTGTTTGCCCTATCACGCGAGCAGTCCTATGCCGGCTGTACCGGTGAAAGCGCTCGCACGATTGTAAGCGCATGAATTTGTAGGCACTTGCATGGAAAAGAATGTGGTGTAACTTGTTCGCTGTGGAAGTGGTTTCGTGCAGAAAGGAGGGCGCTCGCATCATGAGCGAGAAGCTGAGGAAGATCAGACGTTTCTATGAAAACT
# Right flank :  CGGTCTCGCTGCGGACTGGGCCTACATCTCACAGCATGATAGTAAGGGGTCGGATACCTTTGTTAAAGGACACAGTTGTGCATGGCTCTCTCCTTCGGTACTCAATTCGAATTGTGGTTACGACAGCAAATCCGCGACGGGTATTCCGGAATCGGGAGCGGCAAGGGGGGCGAGAGAGTCGGAAGGGCTGCGCTTGTAGGATGAACGATATGAGTTGCTTGGGCCGGTCGAGGTGACCGGGTCTCGGTACACCTCCACGCAGTGCTCGGCAAGGTTGACGATCTAGTATTCTCGGATGCCGGCGCAGGCGTAAATTCTCGCTTTGTACGTTCGGTCTTTGGCGAATGTACTATCTGCGACCTCGATGACTCATACGGCTGTGCGAGGGGGCTCATGAACGTAGTCTCGTGGGGAACCATGCACCACCGCAAGCTCCGGCTCCGGTTCTGAATCCGGGTCCACGACGAGCGGCAATTGGATGCGAATCCAGTAGGAGGGAC

# Questionable array : NO	 Score: 3.26
# 	Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATTTCCGCAGCTGAGATGCTGCGGCCCCATTGAAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [7,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-11.50,-10.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [50.0-45.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         NA [0.37,0.37   Confidence: NA] 

# Array family : NA
//