Array 1 1149200-1149440 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP018786.1 Sutterella megalosphaeroides strain 6FBBBH3 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================= ================== 1149200 36 100.0 32 .................................... ACGTAGATCCGCTTGACTTCGGTAAAAAGCTC 1149268 36 100.0 33 .................................... TGATTACCCGAACCAGGCTGATTGCCGGGTTGA 1149337 36 100.0 32 .................................... AGAGCACACATGCAGATGTCGTTGAGGATCGT 1149405 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================= ================== 4 36 100.0 33 ATTCTGACGGTACCCTGATCTTGAAGGGATTGAGAC # Left flank : CGAGGGGAGGCCGACAAGACCTTGCGTTTTGTGACGCCGCTGCGCCTCCAGAATAACGGGAAGATTTACGGTGCCAAAGACATCGAGCCCCTGCCTTTCCTCACCGCGCTCGTGCGGCGGATCGGTTTGCTTGCCGAATTTCATGGAGACAAGCCGAATCTGAACTATCACGCCCTGAGGGAAGCCGCGCTTGCGGTCGAATCTTCCCATGCGTTGAGTTGGCAAAATTGGAAGCGCTATTCGTCCCGTCAGCAAAAGAGCATGTATCTCGGCGGACTCGTCGGTACCTGGACGCTGAGCCGGGTTCCCGAAGCGTTGCAGATTTTTTTGGAGCTCGGAAGCTACCTCCACGTGGGTAAAAATGCCACCTTCGGGTTGGGACGCTATGAAATTTTACATTGATTTATATCAAGGATTTAAGTTATGTTCAAAAGACTACTGACGATGAATTTTCAAAGCCTGGATTTGCTAGTCGCACAGGCGTTTTCTGGAAAACTGCT # Right flank : CTTGATGGATATGACGGATATGACGGGGAAGGACGTGATGCTGACGCTTGAAGAGATGGCCGGGATCTCACAAGTTTGTGAGTTTTACGGAGGAGGAATTGGAGGAGTATATTTCCCGTGTGAATACGTTCGTATGGAGGTGATGTGTCTCGCGTGCTGTATTTGGTTTGCTATGACGTGGCTGACCCCAAAAAGTTACGACGTATTCACAAAATGACGGCGGCATATGCGGTGGGCGGTCAAAAATCGTTTTATGAGTGTTGGATGACGGAGTCGGAATTGAGACAACTCAACCGACAAATCGAAGACGAAATTGACTTGGAAACAGATCGGGCTCATATGTTTTCCTTGGATCCAAGGAGCTCTCCGTTTTTATTTGGGGTTGCGAGCCGTCAATCCATCAATCCTTTCATGGTGATCTAACGATGACTAGTCTCTTTGTGGATCGGAGAGGTGTCGAAATCAGACTCGACGGGGAAGCTCTGACTTTTTACGAAAAA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCTGACGGTACCCTGATCTTGAAGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.80,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 2116922-2115913 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP018786.1 Sutterella megalosphaeroides strain 6FBBBH3 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 2116921 29 100.0 32 ............................. GGGACCTACACGCTCCGGGCCTTTTCGATCCC 2116860 29 100.0 32 ............................. GGCTCGGCGGGCGGCCTTTGTCTTGGTCCCGT 2116799 29 100.0 32 ............................. GCGGACTGGACGGGCATGCAGTTCGGTATGAA 2116738 29 100.0 33 ............................. GACGATTGCGGGCGTTCCGCACGTTTTCGCGTG 2116676 29 100.0 32 ............................. AGCTTCAGTCTGAGAACAAGGCGGCAAAGGAA 2116615 29 96.6 33 ............................T GACGCCCGACTCGATCAAGTTCAACGCCGGTCG 2116553 29 100.0 32 ............................. GGCGCGGGTTGCGGGGCTCGGAGCAATACCAA 2116492 29 100.0 32 ............................. GTCGTACGTACCGGGCGCGTTGTGGTCGGCCA 2116431 29 100.0 32 ............................. TCATCCATCGCGGCATTGTGCTGGCGGCGCGC 2116370 29 100.0 32 ............................. TGATGAGCGCACTCGTCCCAGTCCTCGGCATT 2116309 29 100.0 34 ............................. GGGCATCGGTTGGCCTTTTCGGCCGCACAGGGTG 2116246 29 100.0 32 ............................. TCATCGACTCGATCACCAAAGGAGGAAACCAA 2116185 29 100.0 32 ............................. TGAGACGTGCGTTTGTCAAGCGTAGCGAGAAT 2116124 29 96.6 32 ...........A................. GTGACGAGTTTGAACGCCGCAAAGGCGCCCGC 2116063 29 100.0 32 ............................. CTTGCGATTCTCGTTGTCGACCTCAACTTTCA 2116002 29 100.0 32 ............................. GGCAGGCTTCAAGCGCGAATCACGCGCCATAT 2115941 29 89.7 0 .........................GA.T | ========== ====== ====== ====== ============================= ================================== ================== 17 29 99.0 32 GTATTCCCCGCGCAAGCGGGGGTGTTTCC # Left flank : TCCCTGGAGTTATCTTCGCATTCCTAAAAAATCAGATGGAAAAAAGGCCAATAATGGTGGTGCCAAGTTGACCCGGAGATACTATCTGCAAGATGCAGCTTTTGCTTGCATCTTAACGGTTCCGGAGAGATGGTCCATTGCCATGGTGAATGGGCTTAAGAATCCAAAATGGCCAGTCTATCTTGGGAGAAAAGGATGCCCACCTTCAGAGCCGATTTTTTCCGGTTGCTTTGCGACACCTGATGAAGCTAGATTAGGGCTAATAGAGCTTCTGAAAGAATCTTCTTGGATTCCTTTTGAGAAGATCACAGAGGATTGGAGTGGAGGTCATATCGGCGGGATGGTCTTGTATGACGTTCCAGTTACTTTTGGAATGCATAAAAAATATGCATCACGAAAAGTTATTCGGACCCCAATCGCAGAGGTTTGAGCTAAACCCTGGAGTACAGCCATATGGCAATATATGGTTCTTTCGCTAAAGAGTAATACAAGATCTTGCT # Right flank : TTCTTTGATGGTTAATTATTCGTTAATTGATGAACTAAACGCAAGAATATAGATTTGTCAATAGGCAAACATTAAGTCTTATTAAGGCTGTGTTTTCTTTCGTATGTAGGAGATTTATTTGTTTCGATGGTTATTTGAATGTTAGGTGGATTTATGGCAAGAAAGATATTTTTAAAGTTGACGAGGGATTTATATCCACAAGTTAAGGATAGATATCCGTATGTCTATCTTGAGCATGGAAGATTGGAGGTTGACGATAGTAGCGTCAAATGGATTGATTCGGAATGCCATGTTGTTCGCATACCTATTGGTCTGGTTGCTGCTATCTTATTGGGGCCTGGAACAACTATTACGCATGAAGCTGTCAAGATTCTCTCTTCGGCAGGATGTACGGTCTGCTGGATAGGCGCGGAAGGTTTGGCGTTTTATGCTTCTGGCGTATCACCAACATCGGACTCTAGAAATCTGCTGCGACAAATTACAATGAGTTGTGATCCTGA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGCAAGCGGGGGTGTTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA //