Array 1 2264332-2262709 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046395.1 Lacticaseibacillus rhamnosus GG strain JL-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2264331 36 100.0 30 .................................... AAGAAACGATCCCGAGTTTCTGGATTGCTT 2264265 36 100.0 30 .................................... TCATCAGTATTCATGGAAATATAGGATGCT 2264199 36 100.0 30 .................................... ATCATCGAATCTTTGGGGACCTTACCACTT 2264133 36 100.0 30 .................................... GATTGTTTCGGTTGCTTCTGTGATGCCACC 2264067 36 100.0 30 .................................... ATGACTGGTTGCCGGTAAGCGATGAGTTCA 2264001 36 100.0 30 .................................... CATACTTGTATGAGCACTTTGACTTGTCAA 2263935 36 97.2 30 ....................T............... ACCGTTTGTGTTGCATGAATATGATCACTA 2263869 36 100.0 30 .................................... AGGTGCTATGCCGCTTGGCATGACGATTGA 2263803 36 100.0 30 .................................... AATAATATTGTGCCAAAAGGTAGTATTCTA 2263737 36 100.0 30 .................................... TCCAAGGGCATTCCAGATTGCAGAAGCCCC 2263671 36 100.0 30 .................................... GGGTGATGCTGACAAGATCAAGACGGCTGT 2263605 36 100.0 30 .................................... CGCCTTACGGGCGACAGCTAGGCCTATGGG 2263539 36 100.0 30 .................................... AGATCGAGCATTACGGCTTGCAAGACTGCG 2263473 36 100.0 30 .................................... ACAGTTGAGAAAAGAAAATACGCATTTAAA 2263407 36 100.0 30 .................................... AAAAACACAAATGGCCGCTGCCACCTTATG 2263341 36 100.0 30 .................................... AAAAAAGCCGCGGAACTTCTCGGGCTAGAC 2263275 36 100.0 30 .................................... CACAGTGCCATTCCACAAACCCGACAGAAA 2263209 36 100.0 30 .................................... CGAGCTTGCGGCCAATATCAAGCTATATGC 2263143 36 100.0 30 .................................... GTGTGATCATCATTACCTCTCTGCCACTAA 2263077 36 100.0 30 .................................... ATCGCATACTTCATGATGATTGATGCCAGT 2263011 36 100.0 30 .................................... CTGTGTTCTCACGTGTCAACAATTATTTCA 2262945 36 100.0 30 .................................... TTGTGGTGCCAAAACGGGTTGTTGTCGAGA 2262879 36 97.2 30 ...................................G TTTCAGCAAATATGACGTCTAACATGCCTC 2262813 36 94.4 30 ..................................AT ACTTGGAAAAGTTGCTATGCAGTTTGAATA 2262747 36 83.3 0 .......................AA.A....G..AA | T,CA [2262712,2262718] ========== ====== ====== ====== ==================================== ============================== ================== 25 36 98.9 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Left flank : GAGCTGGATTTGGACAAGTTATTCCAACGCTTGATCATCAAGAAGGTAAGTCAATTGATAGAGGATCGGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAAGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTAAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTACCAACATCAGTCATTATTTAGATGTTGATAGTTTGAACAAGCTGTTAGATCAGGTTAAGGAAACATCGTTAGAATTACTTCTCATTGAATTTTCGGATGTCGAACGTAGAAAGTTTTTTGAGAGGTGCCAGTATATCTATATTGACAAAGATTTCATGGATAGCCGTGAACTGATTGATTAAGAGACTGTGTGAAAACACCG # Right flank : CCTCACCCCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTCACATGTATCAACAGGCGTTCAAATCCATTTACGACAAATATCAAGATCGGGAAACCAACCCCTACTGTGAATCGTTGGAAAGCTTACAGAAAAAAGTTCAAACGGCATAACAATGCCTTCTTCTTTATAATCGTTAAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCGCAAAAATTCGGCAGTCCGTATTTCACCATTTTTAATCTTGCCGTCTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCTAAATTGGTACATTTGTATCGTAAAGTCGGCTTTCAGCAGCTGCCAGATCGGGAAACAACGATTAATGAGCAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //