Array 1 1339981-1341866 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016602.1 Latilactobacillus curvatus strain WiKim52 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1339981 36 100.0 30 .................................... ATTATCTTAGAGGTAGTAGCGCACTTGGGT 1340047 36 100.0 30 .................................... CGATTGTACTATATGAATCAAGGGAGCTAC 1340113 36 100.0 30 .................................... TGGCCATCAAAAAAGCCTTCTCCTTATTGT 1340179 36 100.0 30 .................................... TTAGCTTTGATAATCGCTTGGCACCCTTAA 1340245 36 100.0 31 .................................... TACCGTTTTAGCAAAACGGTACAATTTAATA 1340312 36 100.0 30 .................................... CAATTTGCAGCACTATTAGCAATCGTTTTA 1340378 36 100.0 30 .................................... ATATTGGATGAAAATATAGTCTGAACATTA 1340444 36 100.0 30 .................................... AAGTGATTGAAAAGATTGTGAAACTTGCCA 1340510 36 100.0 30 .................................... TGATGAAGATTTTACAAAAAGTTGGGAGTA 1340576 36 100.0 30 .................................... AGCATCAAAATCGATTCTCGATTGAATTTT 1340642 36 100.0 30 .................................... TTTCAGCTGACAAATTAATGGGTAAGTTAG 1340708 36 100.0 30 .................................... TGTTGTTGCTTGTCGGTAACCACACCATCA 1340774 36 100.0 30 .................................... CAACCAATTTAAACCAATTAACAGAAATCA 1340840 36 100.0 30 .................................... AATGCTCCTAATTGCATATCTGCCACACTA 1340906 36 100.0 30 .................................... TTTATGTCAGTCAGAATATGCCATACAACG 1340972 36 100.0 30 .................................... TAGGGTATTATCTAGATTCAATGGATGTTG 1341038 36 100.0 30 .................................... CATTAGCGTTCGAGTCATCAACAACACCTT 1341104 36 100.0 30 .................................... TGTTCTTTGGTTGATCCCGTTAGTGAGTAG 1341170 36 100.0 30 .................................... TGTTTGGCGTGATTTTTAGCGTAGGCGTCA 1341236 36 100.0 30 .................................... ATAAACCGGGCGCTGATGACTACACGGTTC 1341302 36 100.0 30 .................................... AAACTCCAGCCGGTATGGCTGCGGTTGCTA 1341368 36 100.0 30 .................................... TCTACTTTAAAGATACCAGCTATTACCGAA 1341434 36 100.0 30 .................................... ATGATGATGAAATTATCGAATATTTAAAAA 1341500 36 100.0 30 .................................... ATCGCTTAGATAGTCGGAAGGCTAGCACAA 1341566 36 100.0 30 .................................... GCACAAATGGTAAACGATTCAAACAATTAC 1341632 36 100.0 30 .................................... TGAAGACGAAAACGTAATTATGACGTACGA 1341698 36 100.0 30 .................................... CATGATCGTTAGACAAACATATCTCGCACA 1341764 36 100.0 30 .................................... GTGACGATTGACGATGACCTTGTCCGCTGA 1341830 36 83.3 0 ........................A....T..TTTA | T [1341857] ========== ====== ====== ====== ==================================== =============================== ================== 29 36 99.4 30 GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC # Left flank : GCAATTAATTTGAATCATCTATTTCAAAATCGGTTGATTAAAAAATTCGCCGCCGACTTAACGGATCAGCAACGCCAGAAATTAACTCAGTTAGATAGTGAGGTTCGTTCAACGATTTTGGATGCGGCCTTTATGTATGAATTGACCTTAGATGTCAATCAGGAATGGGATCTTCAAAGAATGATTAAGTTCTATAATTTACAATTTTCGACTGTCGTCCAACATGACCCATATGGTATAATTGAGAGTATAGTACAGACAGCAGTAGAGTTAAATGAATCAAAAATAATTACGTTGATCAACGTTTCGCACTATCTCAGTATCAACCAATTTAATGAATTGGTGAGGTTGGTGGCGACATTGAATGTGAAACTCTTTCTCATTGAATTTTCAGAAGAGGTTAAATCTGATCAGTACCAGAAATGTTGTTATTATCACATCGATAATGATTATGTCGAATGGCGCTATGAATAAAATGAAATTCTGATGAAAAAACGACG # Right flank : ACCTATTCCCCCAGGAAAGCTATTGATAAAGATCACGTCGCCTACGTGGTCTTTTTTCATGCATTCAAGCATTGAAAACAGTTCTCAATTAGCATAGAATTAAGAGCGTATAATAATTGCTAGAATGCGATTCTTGGAGGGTCATCTATGTCTAAATTAGAGATTATCGATTTGCACGTCGGCATCGACGGTAAGGAAATTTTAAAAGGTGTTAACCTGGAAATGAACACGGGTGAAATTCACGCGATCATGGGACCTAACGGGACTGGGAAGTCGACGCTTTCGGAAACGATTATGGGCAATCCCAAGTATGAGGTACTACAAGGTCAGATCAAACTAGATGGCCAAAATATTTTAGAAATGCCGGTTGATGAACGCGCCCGTGCGGGGTTATTTTTGGCGATGCAATATCCTGCTGAAATTCAAGGGGTAACGAACGCTGAATTCATGCGTGCGGCGATTAATGCACGTCGGGCTGAAGATGATCAGATTTCAGTGAT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 2 1726390-1725813 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016602.1 Latilactobacillus curvatus strain WiKim52 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1726389 28 100.0 33 ............................ CACCTTGAGGCATTACCCGTTCGCCCAACCAGT 1726328 28 100.0 33 ............................ CATTGAAACTCGTGAGGTAAAATAAATGACAAA 1726267 28 100.0 33 ............................ TCAAAACGACCGACCCTGGCGTACTACCTTCGA 1726206 28 100.0 33 ............................ CCTTTCCCACGCTGACCAGTTCGATTTTTTCGC 1726145 28 100.0 33 ............................ TATTATCCAATGATATTAATAAGTATAATCTTA 1726084 28 100.0 33 ............................ TAAGCTTGTCTTTAATCGCGTCGTAAGTGTTCG 1726023 28 100.0 33 ............................ TAGTCAAGTCATAGCCAAATGGTTATGGCTTTT 1725962 28 100.0 33 ............................ TACGTACGTGTTATAATATATTTGTAATCAAGA 1725901 28 100.0 33 ............................ TAACATCACGACTGGTACTATCAAAGGTGCTAA 1725840 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 10 28 100.0 33 GTGCTCCCCATATACATGGGGATGATTC # Left flank : TACTAAAGCAGAAATTATTTCAATTGGAGCAGCCAAGATAATGCCCGACGGACAATTACTGCAATTTGAAAAATTAATTCGAAGTGTGGATTCAGTACCATCCAAAATTACTAAACTTACCGGAATTACTTCAGAACAGTTGCAAAAACAGGGTGTTGAGCTTTCATTAGGATTAGAGGCATTGTCTGATTTTGTTAAGGATTCAGTCATCATCGGTTATAATCTTGAATTTGATGAAAGGTTTTTAACGGAAGCATTGCGGAAAGTTGGAAAAACCGAATTTACTAACTCTACCCACGATCTTATGCCAATAGTAAAAACAACTCAGGAGTTTTTAGATAACTATCGTTTAACGACTGTCTTGGAAGTATATCAGATAGAGAATTTAGATCCACATCATGCATTATCTGATGCTCAAGCTACGTTGTCTTTAGCAGAGAAGTTAATAAAAAACGGCAACCTTGTAATTTGAAAATGCCTATGTAAAGGCTTTTTTTAGT # Right flank : TGGTACAGACGGTGGAACTTGGATGAACTACATTGTTGGTACCACTGATACCACAAAGAGACATTATGTGGCAACCATCTCGCTGGATGGGTTTTCGCAGCAAGGTGTTTATATCCGCCTTGATAATATTCCTTCGACATCCACTATTACATTTTCAAATATGAAACTGCAATTAGGTTTAAATGTGGTGGTCTCCAATCTTTCTCAAGCCGTGGATGGTATGCGACTTGATATCTCTAAGAAAATTGAGCAGAAGGATCTCAACGGATATGCAACCCAAACGTGGACACTGGATCAGATTAAGTTAATTTCTGATTCAATTGCTTCGTTGAAAATAAAAATTGACAATCTTAGTCAATGAAAACAATAAGAAGTAACATCCACAGCTATAACTGATGGGTCAAACCAGGCTCCTATGTCAAGAATCCGGACATAAAAGTACGAACAAATTTGACTTTCAATTTAAATTACTTAATTTAATTTTCGGAGGCCGAAGTTTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCATATACATGGGGATGATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.30,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 3 1738294-1737168 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016602.1 Latilactobacillus curvatus strain WiKim52 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1738293 29 100.0 32 ............................. ATCTACCGTCATCATAAGCAATATCTTTAAAT 1738232 29 100.0 32 ............................. CAATCAGACCAGCAGAGTCAATCAGACCAGCT 1738171 29 100.0 32 ............................. AGCATGTGCACGGATTGGGAGGATTAACGTGG 1738110 29 100.0 32 ............................. TCAATCCCGAAAACCTTGGCAACTTGCTGAAC 1738049 29 100.0 32 ............................. GGAAGGAAAAAACACAAAAACACGCCAAACCC 1737988 29 96.6 32 ............................C ATAGACCGCGGGTGTAACACTTAATCCGATCG 1737927 29 100.0 32 ............................. ATTCTTAAATGCTTTTTCTAGTTTTTCGTTTT 1737866 29 100.0 32 ............................. TTAAAAACAATAAGCGTATTATAATAGACATA 1737805 29 96.6 32 ............................C TAGGGTCTAAGTCGTCTAACCACGTTGAATTG 1737744 29 100.0 32 ............................. CACAGCTGGTGCAACAATCGTTAATACCCACT 1737683 29 100.0 32 ............................. GGCATGCACCTGAACCAGATGAACCAATCAAT 1737622 29 100.0 32 ............................. GCATAATCGTCAAACATGAACGAATAATCAAA 1737561 29 100.0 32 ............................. GGCATGCACCTGAACCAGATGAACCAATCAAT 1737500 29 100.0 32 ............................. GCATAATCGTCAAACATGAACGAATAATCAAA 1737439 29 96.6 32 ............................C GTGGCTACTTTTTTAGTCGTTTTAACATTGGT 1737378 29 100.0 32 ............................. CAATCGCATTAACTCATTAACTGAGACGAACA 1737317 29 100.0 32 ............................. CTCATCGCAATTATACGTTTTAGCGGGATTGG 1737256 29 100.0 32 ............................. ATTCATCGCAAAAATTCAATAATGCTTTTAAG 1737195 28 75.9 0 ..GT.......A..C.....-...G..T. | ========== ====== ====== ====== ============================= ================================ ================== 19 29 98.2 32 GTACTCCCCATGTATATGGGGATGATTCT # Left flank : GGAGAGTTGGCAGAGTGGTAATGCAACGGACTCGAAATCCGTCGAACCGGCTTATACCGGCGCGCAGGTTCAAATCCTGTACTCTCCTTATATAAGTGATTTTAGAACACTTTTAAGTGTTCTATTTTTTTGTCTTAAAGTGCTAAAAGCGTTGATACAAAAGGGATAAGGAAGATTTTTTTATTTTACAATCTACCTTTTATCGACGAGATATTGGTAAGAACTCCATTTAGTTCAAAAAGGTAGAAGTAAGATTTCGTTTGAAATATTACTTCTACCTTTTTATTTGGATCGACATCTTAGAATTTTGAGTTTTTGAAAAATTTATAGACATAGATATTTAGAGTATTTTTTATTAGTCATTGAAACTATTGAAAATAGCGTTGCATAGAACAGGAAAGAAAGGTATGATTTAAGAAATTGGTAATCTTATTGGACAAGTTAATAAAAATAAGTGGTTTTCTAATTTTAAAATGTTGATCTAACAGTCTTTTCTTAGT # Right flank : AATTAGGGCCAAGTGCTCTTTTTTATCATAATTTTTTCAGAAGTGAAATTGTACCGTAAATAGATTTAGTCATGAGCTAATTTGTAATGAGGTTAGATATTAGAGGTAGATTGTAAAATTAATCCGAACGCTGTTCGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCATCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAAACCTTTTGTGAACTAGGGCTGTCCAATATCCAAATGGGCGTTCGGCTGAACCGATCACCGTCAACAATTTCTTATGAATTATCTCGATGTCAACCTTATCAGGCTGAATTAGCACAAACAGATGCCGAATACAAGCGATCACGATGTGGTCGGAAAACTAAGCTGAGCGATGAGTTAAAGCAAAAAATTCTCAACCATTTACGTCTAAGCTGGTCACCAGGAATGATTGCTCACGAATTTAAACTAGCTACTAAATCT # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACTCCCCATGTATATGGGGATGATTCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.30,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //