Array 1 8697-13835 **** Predicted by CRISPRDetect 2.4 *** >NZ_PIRY01000004.1 Campylobacter concisus strain H11O-S1 NODE_4_length_149851_cov_42.1538, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 8697 30 100.0 34 .............................. AATTTATATGGTTGTGTATTCGTCCTTGACGAGT 8761 30 100.0 37 .............................. GAGCATGGCTAAACAAAACAATGCACTATGATTTTTT 8828 30 100.0 34 .............................. GGCTTTTAGGCTCGGTATCAAATTGATGAGCTAA 8892 30 100.0 36 .............................. CATCTAATCCTTGAAGATATCCTTTCTCAAAGTTCA 8958 30 100.0 34 .............................. TGTCTTTTTTAATGATTTTTGCGATTTCTTTCTT 9022 30 100.0 37 .............................. ACATAGACATCATAAATCATCTTAGGCGTGGAGTGAC 9089 30 100.0 37 .............................. CTATGGCGATGAGTATGGCTGCGATGAATATGGTTAT 9156 30 100.0 37 .............................. TAGATTAAATAGAGGGGTGTAGCCCCTCTTATTAAGG 9223 30 100.0 35 .............................. GAGTATCACCGTCTGCTACACCTACTACCCTACCA 9288 30 100.0 35 .............................. TTCCATTTTGCTCTAATATCATCAAAAATACTTTG 9353 30 100.0 39 .............................. AATACTCCATCGTTAGGCTCTTAGCGCTATCGTCATTCG 9422 30 100.0 34 .............................. TAGATGCGATGGCGGCGCTTGGCTATGAGGTCGA 9486 30 100.0 37 .............................. TAACGACAAAAGCAAAGGGATAAAAGAGGAGTACGAA 9553 30 100.0 36 .............................. TAATAAACAGCAAGGCAATAGATAAAACATTTCAAA 9619 30 100.0 36 .............................. TTTTTTCAACCACTCTTGTTTAATCTCTAGCAATCT 9685 30 100.0 34 .............................. AAGACGATGGACAAATGCTCGTCGAAAGAATGAA 9749 30 100.0 35 .............................. TCTTATGACGGCACACACCGCAAAGGGGCTGGAGT 9814 30 100.0 35 .............................. ACATATACAAAGTCACCTTCCCAAGGTATTTTTAA 9879 30 100.0 37 .............................. GCATCGAAAAAACGATCAGTGAGGAGCCTAATACTAG 9946 30 100.0 34 .............................. ATGATAAAACACAAGGTGAAGCACTATGTTTGGC 10010 30 100.0 37 .............................. TTTTGCAAATAGAGGGCTATTTTTGATATGCTCACAT 10077 30 100.0 37 .............................. TTTGATAATGGTTTTGTAGAGTTTCCCATAACTCCGT 10144 30 100.0 35 .............................. TCTTCATTGAATACGTTAAACGTGATCTTGGTAAG 10209 30 100.0 37 .............................. AAAGATGAAGTAGAAAAACAAGGCTACGAGCTATATA 10276 30 100.0 37 .............................. TCAGGCTTTTCAACTTCAAACATAGACATAACAATAA 10343 30 100.0 36 .............................. TAATATATACTTGTTCTATTTCTTTTGGCAGTAGAA 10409 30 100.0 36 .............................. ACGAACTTGTCGAAAATATCAATAACGAAATAGAGA 10475 30 100.0 34 .............................. ATCAATAAAAGGAGAACGGCTATGAGCGAGATAG 10539 30 100.0 35 .............................. AGTATTGACCACCACTTATTTTGTTTAGGTCGCTA 10604 30 100.0 37 .............................. GTGCTGTGTCTTTATATAACTCTTGCAATGCTTCGGT 10671 30 100.0 35 .............................. AAAGAAACTCAAGATTTCGATGAACTTTCGGCGTG 10736 30 100.0 36 .............................. CAAGGCAAGTGCAGGCGGTGGCAACGAGATAGACGA 10802 30 100.0 35 .............................. AAGCTATTTGAAAAGACTAGAGCAAATTTTGCAGA 10867 30 100.0 35 .............................. GATGTTAGATTAGCTGGCAGTAGCGAGATTATAGG 10932 30 100.0 37 .............................. AATTTGTCAGAGTCCTTTTCAAGATCGCCATAATCTA 10999 30 100.0 36 .............................. GGATTTGGCTTTGTTTCTACACCAGCCCCACCGCCA 11065 30 100.0 36 .............................. TCACTGCGTTATGGTGTTCGATGGCAAAAAATCCTA 11131 30 100.0 36 .............................. CCATATTCAAAGCCCAAATCATCAAGCACATATTTT 11197 30 100.0 35 .............................. CGCTTGATGGCTCTATCTCGCTCACTTTTACGCCG 11262 30 100.0 34 .............................. AAATCAACTATAAAATCATTTCTCATTTTTCCCA 11326 30 100.0 36 .............................. ATCTCTAAAAATCACTTAGGGCGGAGCTTCGCCCCT 11392 30 100.0 35 .............................. AAAAGTTGGGGTATGGGGTGAAAACCCCATAAGTG 11457 30 100.0 35 .............................. TAAGATCAAAAGATAAAAGATTTCAATATGGATAA 11522 30 100.0 37 .............................. CTGGAGTGAGGCAAATTCTACCTATGACAATAATTTG 11589 30 100.0 34 .............................. TACGATAAAACAACCCTAACAATATGATTTTTTT 11653 30 100.0 38 .............................. GGTCTTAACTGGGACGGATCAGTTCAGGAAATCATAGT 11721 30 100.0 34 .............................. GCAAATCAATCACGACACCATAAATGGGTATGGA 11785 30 100.0 36 .............................. AGGACGCTATCGCTAAGATCGATAAAAGCTTAGAGC 11851 30 100.0 34 .............................. GCGGTATAAACAAAAAAACTACTGCTAAGCAACG 11915 30 100.0 34 .............................. ATTTTTGCTGGACAAATAACGCAGGCTTACACCA 11979 30 100.0 34 .............................. ATAAAAAACTCTTACCTTTAAGGAAGTGACTATG 12043 30 100.0 37 .............................. AAAAGTGATACAGGTAAATTTAAAGCTGAATTTGAAA 12110 30 100.0 36 .............................. CGCAGTATTTCACTTTTCTCAATGGAGTAACATAGC 12176 30 100.0 35 .............................. AAACACAATAAAGAAAGGAATAAATAATGACTTAC 12241 30 100.0 35 .............................. TACGCATTTATCGCGGCTAGAGTATTAGCGCCTAA 12306 30 100.0 36 .............................. CCACAAAGATAAAAATGGCGACCACATAGATTTTGA 12372 30 100.0 39 .............................. TTTATCATCGTTTGACTGATTGTAATTATCTCGTTCATT 12441 30 100.0 34 .............................. ACAATATAAGCCCAGATTTGCAGGGCGTCCGCCC 12505 30 100.0 36 .............................. CAGGTGGAAATTTATTTATTGACGGCATCGGATTGA 12571 30 100.0 35 .............................. AATTTAGAATAATCGCCATTTAAAGCACCCCTAAA 12636 30 100.0 34 .............................. AGCGTTGAGGGCGTTAGCAGTTTGGAAATTTTAA 12700 30 100.0 37 .............................. CACCAAAAGCCAGCGTTTGCGGCGTAATCCCCGCAGG 12767 30 100.0 34 .............................. CGGATCGCCGAAAACATATCGACGCCGTCATTTT 12831 30 100.0 34 .............................. AAAACAAACTTCAAAAGGCAGAGGACTTTAAAAA 12895 30 100.0 35 .............................. TGTGCTTGATGGGCTGCGCAAGCAAGGAAGTAGCA 12960 30 100.0 34 .............................. GCTTTTTTGGTAAAAGCGCAGAGATCGCCAACCA 13024 30 100.0 34 .............................. TTTACGGTGATTTTGGTATTTAGTGGCTTCACTA 13088 30 100.0 36 .............................. TATATTCTTGCAAACTTGCCAACACCAAAGGCTAGA 13154 30 100.0 36 .............................. CAATGACTGGTTTTTGGATTTTGAAAACGGCGTTAG 13220 30 100.0 35 .............................. TTTGAAGAAAAGATAGATATTGCCCTTAATAGGTT 13285 30 100.0 35 .............................. TTTATATCGCAAAAAGCCAAAACACAAACAAAAGC 13350 30 96.7 35 ............................G. TTACTATGGAGATGATTATTACAGAGATGAATATG 13415 30 100.0 35 .............................. CTTTAAGCTAGGAGAAAGAAGTGTAATAGATTTTT 13480 30 100.0 36 .............................. TATACTTCGCAATGGACTTTACCGCAGACTTTGCCA 13546 30 100.0 35 .............................. ACAAGAGGATCTAAATCATTATTGATAATCTCAAA 13611 30 100.0 36 .............................. ATAATTTGACAAGAGCCACCATTTGGCGGACTTCGT 13677 30 100.0 36 .............................. TAGCTTTTGATTTGTAAATACTCGGCGTTATATTTA 13743 30 100.0 33 .............................. CTCTCTCCGCTTGGTCGGTATGCTAAAAACAAG 13806 30 96.7 0 ..................A........... | ========== ====== ====== ====== ============================== ======================================= ================== 79 30 99.9 36 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : GAGCTAGATCCTCGCATCGGCTTTTTGCACGAGCCAAACTACCGCGCGCTAAACCTTCACCTCGATCTTGCGGAGATTTTTAAGCCGATCTTGGGTGATACGCTGATTTTTAACATGCTAAATAAAAAAGAGATCACCGCAAAAGACTTCCAAACGGACGCTGGCAGGATAAAATTTAGCAACGACGCCGTGCAAAAGATCGAGCTAAAGATGATCTCGCGCCTTTGCGAGACGCTCACGGTTGGCGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAGTAAACAAGCTCAAAAAGTGCATCTGCGAGGATGCGCCTTATGAAGGCTTTAGGTGTGAGTAAAATCGCATTTTAGTAAAGCGTTTTTTAAGATTTTAGAATGCTTTAAATTTAGGGCTTGGCGTATTTACACATGGCTAAATTTTAGTCAAATTTAAGCCGAAAAAATATAGACTTCTTGCATCAAAAGGCCTATAAATCAGCTTTTTGGTGCT # Right flank : CAAGACAGAAGCGACAAATTTAAAAGCCAAAGATTTTCAGAGAAGAGATTTAAATAATAGATCAGATAAATAATAATTGCTATCTTGCAAAGATGTATCAAACTGATGATAATATAGTTTTATGCAGATACTTCGAAAAACCAAAACCCCAATAAACACAGCAAAAAAAGAAGCTAGAAATAATAATGAAATAGACTAAGCATAAACAAGCTTAATATCAAGAGCATTAACAACCTTAAATATACTTTCAAATCTAGGCTTTGAATTCTCTTTAAACATCTTATAAAAGCTTTCTCTATTTAAATTTGCTTTCTTTGCAACGTTTTCAATGCCTTTTGACTTTGCTATATAAAATAATGCTCTTTTAAATTCTTCAATATCGCCATCGGCTAAGACTTGATTTAAATACTCTTTTCTTAATTCATCAGTTGTTAAGTAGTCTTCTAAATTAAATTTTGTAAATTCTTCTTTCATCTATAATCCTTTAATATCTCTTTTGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //