Array 1 30070-31027 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANGL01000164.1 Campylobacter coli BIGS0001 164, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 30070 36 100.0 30 .................................... TTATGATATTTAACTATATCGCTCATTTGC 30136 36 100.0 30 .................................... TGCGATAATCGGGGTGCGGGGGCGTGAAGT 30202 36 100.0 30 .................................... CAAGCTCATGCAAACGAAGATGAAAGCGAA 30268 36 100.0 30 .................................... ATTGCAGGCTGACTTAACCTTTTTTGCTTA 30334 36 100.0 29 .................................... TGTGTATTCTGTAATGTAATGTGCCTCAT 30399 36 100.0 30 .................................... CTCGTATTCGTGTCGTGGCAATCTTTTTTC 30465 36 100.0 30 .................................... TTTGATATATTGATTTGCAACTTCTGCTTT 30531 36 100.0 30 .................................... AATGAAAATACTCTATCATCAACCCAGGAA 30597 36 100.0 29 .................................... AGAAAATCTACGCTTGAAAGTTTTTCCCT 30662 36 100.0 30 .................................... AGAATCATTCAAAATTCTTTTTATATTAGT 30728 36 100.0 30 .................................... CTTTTCTACTTGGATAAACAAAAAGTTTTA 30794 36 100.0 30 .................................... TCTTCCAAAACTATTAACACTGTTGCTAAA 30860 36 100.0 30 .................................... TTAATAAAATCATCATCCACAGTCTTTTTT 30926 36 100.0 30 .................................... CTGTTACTGATATATTACTTGCCATTTTAA 30992 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 15 36 100.0 30 GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT # Left flank : AAGACCATTACAAGCTTCTTTTATATCTAATTCACAAGCTTTTTCATAGTATTGTTTAGCTTTAGAATAATTACCTTGTTTATGTTGTTCTTTTCCAAGATCAAAATAATTATCATTTGAATAAACGCAAACAGGTATTAAAGTAAATACAAATATGAAATATTTCATCACCATCAATTTTCCTTTTAAAGCTATATTATTTGAAATTTTTATATTCTTTACAATCATATTCATCTCCTAATTCACAAGATTTTTCATAATTAATTCTTGCTGTATGGCAATCTCTTTCGATGTACTTACACTTCTTTAATAAAATAACCATCGTTCGAAAATACATTTGTTGTTAATAAAATTAAGAACTAATATATTTAATTTTATTTGTTGCCTTTTATAATTAATTGTTAATTATAGCATAAATTATAATTTACAATTGATAATATGTTATGTAAAAATTAAAGTTTGAAAAAATTTATTTTTTCAAATTCCAAAAGCGACATATT # Right flank : TAGACTTTGAACAAATAAAGAAAAATAGAGCTTTTTGTATACAAAAATGTATAAAAATATGCTATCATTTTAAAAGAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTCGGTTAGCCACGCAGGGTTACAATCCCTTTAAAACCGTTAAAATTCAAACAAACTAGCCTGTCTAATTTTATTAGACTTAGTTTTATTTTCTTTACATATCTTGTCATTGCTGTATTTAAAATCTTGTGTTTTTTCATCGTATTCAAAAAGAACTAAATTTTTATCATCATTCATTTTTTCATTAAAAGTAACTCCACCTAAAAGTATTTGCATATTGTCAAATTGTTTTTCGGTTATGGTTAATACTCTTATATTGCCACAAGGAGGTAAAATTCTTTCTACGGATTTGATTGCTGTTTTAGCCGAAGTCATTCCTTTACAAATTTTAACATATACGCTAAATTGCATCATAAAAAAGCCAAGTTTTACAAGCGAAACTCTAAATTTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.56%AT] # Reference repeat match prediction: F [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [81.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //